RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 AEBP2Q6ZN18 517 aaPredicted RBP19.11■□□□□ 0.65
TMEM56-202ENST00000455656 ARHGEF40Q8TER5 1519 aa19.09■□□□□ 0.65
TMEM56-202ENST00000455656 ARHGAP5Q13017 1502 aa19.08■□□□□ 0.64
TMEM56-202ENST00000455656 POGZQ7Z3K3 1410 aa19.08■□□□□ 0.64
TMEM56-202ENST00000455656 SCAPERQ9BY12 1400 aa19.07■□□□□ 0.64
TMEM56-202ENST00000455656 SIGLEC1Q9BZZ2 1709 aa19.06■□□□□ 0.64
TMEM56-202ENST00000455656 EFCAB2Q5VUJ9 269 aa19.04■□□□□ 0.64
TMEM56-202ENST00000455656 ITSN2Q9NZM3 1697 aa19.04■□□□□ 0.64
TMEM56-202ENST00000455656 ABCC1P33527 1531 aa19.04■□□□□ 0.64
TMEM56-202ENST00000455656 KDM5CP41229 1560 aa19.03■□□□□ 0.64
TMEM56-202ENST00000455656 VPS8Q8N3P4 1428 aa19.03■□□□□ 0.64
TMEM56-202ENST00000455656 EHBP1L1Q8N3D4 1523 aa19.03■□□□□ 0.64
TMEM56-202ENST00000455656 YEATS2Q9ULM3 1422 aa19.02■□□□□ 0.64
TMEM56-202ENST00000455656 ARHGEF12Q9NZN5 1544 aa19.02■□□□□ 0.64
TMEM56-202ENST00000455656 GPATCH8Q9UKJ3 1502 aaKnown RBP19.02■□□□□ 0.64
TMEM56-202ENST00000455656 MAGI2Q86UL8 1455 aa19.02■□□□□ 0.63
TMEM56-202ENST00000455656 ADAMTSL3P82987 1691 aa19.01■□□□□ 0.63
TMEM56-202ENST00000455656 ZFYVE16Q7Z3T8 1539 aa19.01■□□□□ 0.63
TMEM56-202ENST00000455656 BCORL1Q5H9F3 1711 aa19.01■□□□□ 0.63
TMEM56-202ENST00000455656 TIAM1Q13009 1591 aa19.01■□□□□ 0.63
TMEM56-202ENST00000455656 SAMD9LQ8IVG5 1584 aa19.01■□□□□ 0.63
TMEM56-202ENST00000455656 ZNF518AQ6AHZ1 1483 aa18.98■□□□□ 0.63
TMEM56-202ENST00000455656 MTUS2Q5JR59 1369 aa18.98■□□□□ 0.63
TMEM56-202ENST00000455656 HECW2Q9P2P5 1572 aa18.96■□□□□ 0.63
TMEM56-202ENST00000455656 TRAPPC8Q9Y2L5 1435 aa18.95■□□□□ 0.62
TMEM56-202ENST00000455656 SUPT6HQ7KZ85 1726 aaKnown RBP18.94■□□□□ 0.62
TMEM56-202ENST00000455656 AFAP1Q8N556 730 aa18.93■□□□□ 0.62
TMEM56-202ENST00000455656 MAP3K1Q13233 1512 aa18.93■□□□□ 0.62
TMEM56-202ENST00000455656 DIP2CQ9Y2E4 1556 aa18.93■□□□□ 0.62
TMEM56-202ENST00000455656 ABCA6Q8N139 1617 aa18.92■□□□□ 0.62
TMEM56-202ENST00000455656 MADDQ8WXG6 1647 aa18.92■□□□□ 0.62
TMEM56-202ENST00000455656 KIDINS220Q9ULH0 1771 aa18.92■□□□□ 0.62
TMEM56-202ENST00000455656 SYCP2Q9BX26 1530 aa18.92■□□□□ 0.62
TMEM56-202ENST00000455656 MLH3Q9UHC1 1453 aa18.91■□□□□ 0.62
TMEM56-202ENST00000455656 CCNB3Q8WWL7 1395 aa18.91■□□□□ 0.62
TMEM56-202ENST00000455656 ATP10AO60312 1499 aa18.9■□□□□ 0.62
TMEM56-202ENST00000455656 NCOA2Q15596 1464 aa18.9■□□□□ 0.62
TMEM56-202ENST00000455656 LRRC9Q6ZRR7 1453 aa18.9■□□□□ 0.62
TMEM56-202ENST00000455656 REREQ9P2R6 1566 aa18.89■□□□□ 0.61
TMEM56-202ENST00000455656 C9orf84Q5VXU9 1444 aa18.88■□□□□ 0.61
TMEM56-202ENST00000455656 KIAA1107Q9UPP5 1409 aa18.87■□□□□ 0.61
TMEM56-202ENST00000455656 RIMS1Q86UR5 1692 aaKnown RBP18.86■□□□□ 0.61
TMEM56-202ENST00000455656 PTPRMP28827 1452 aa18.85■□□□□ 0.61
TMEM56-202ENST00000455656 CFDP1Q9UEE9 299 aaPredicted RBP18.85■□□□□ 0.61
TMEM56-202ENST00000455656 INO80Q9ULG1 1556 aaPredicted RBP18.85■□□□□ 0.61
TMEM56-202ENST00000455656 PLEKHH2Q8IVE3 1493 aa18.84■□□□□ 0.61
TMEM56-202ENST00000455656 ZNF777Q9ULD5 760 aaPredicted RBP18.84■□□□□ 0.61
TMEM56-202ENST00000455656 MBD5Q9P267 1494 aa18.84■□□□□ 0.61
TMEM56-202ENST00000455656 ARID4BQ4LE39 1312 aaPredicted RBP18.83■□□□□ 0.61
TMEM56-202ENST00000455656 KANK4Q5T7N3 995 aaPredicted RBP18.83■□□□□ 0.6
TMEM56-202ENST00000455656 FER1L4A9Z1Z3 1794 aa18.83■□□□□ 0.6
TMEM56-202ENST00000455656 ZNF644Q9H582 1327 aaPredicted RBP18.82■□□□□ 0.6
TMEM56-202ENST00000455656 HNRNPMP52272 730 aaKnown RBP eCLIP18.82■□□□□ 0.6
TMEM56-202ENST00000455656 AGLP35573 1532 aa18.8■□□□□ 0.6
TMEM56-202ENST00000455656 ATP7AQ04656 1500 aa18.8■□□□□ 0.6
TMEM56-202ENST00000455656 CAMSAP2Q08AD1 1489 aa18.79■□□□□ 0.6
TMEM56-202ENST00000455656 PLXNC1O60486 1568 aa18.76■□□□□ 0.59
TMEM56-202ENST00000455656 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
TMEM56-202ENST00000455656 ARHGEF5Q12774 1597 aa18.74■□□□□ 0.59
TMEM56-202ENST00000455656 ADGBQ8N7X0 1667 aa18.73■□□□□ 0.59
TMEM56-202ENST00000455656 MLECQ14165 292 aa18.72■□□□□ 0.59
TMEM56-202ENST00000455656 MYT1LQ9UL68 1186 aa18.72■□□□□ 0.59
TMEM56-202ENST00000455656 MYOM3Q5VTT5 1437 aa18.72■□□□□ 0.59
TMEM56-202ENST00000455656 CCDC141Q6ZP82 1450 aa18.71■□□□□ 0.59
TMEM56-202ENST00000455656 RTEL1-TNFRSF6BF6WH68 1400 aa18.7■□□□□ 0.58
TMEM56-202ENST00000455656 MIA2Q96PC5 1412 aa18.69■□□□□ 0.58
TMEM56-202ENST00000455656 A2MP01023 1474 aa18.69■□□□□ 0.58
TMEM56-202ENST00000455656 C3P01024 1663 aa18.66■□□□□ 0.58
TMEM56-202ENST00000455656 MAST1Q9Y2H9 1570 aa18.66■□□□□ 0.58
TMEM56-202ENST00000455656 LMTK3Q96Q04 1460 aa18.65■□□□□ 0.58
TMEM56-202ENST00000455656 PTPN23Q9H3S7 1636 aa18.64■□□□□ 0.57
TMEM56-202ENST00000455656 MROH2AA6NES4 1674 aa18.63■□□□□ 0.57
TMEM56-202ENST00000455656 CROCC2H7BZ55 1655 aa18.63■□□□□ 0.57
TMEM56-202ENST00000455656 RSPH4AQ5TD94 716 aa18.62■□□□□ 0.57
TMEM56-202ENST00000455656 TCOF1Q13428 1488 aaKnown RBP18.61■□□□□ 0.57
TMEM56-202ENST00000455656 APLP2Q06481 763 aa18.61■□□□□ 0.57
TMEM56-202ENST00000455656 CLTCQ00610 1675 aaKnown RBP18.6■□□□□ 0.57
TMEM56-202ENST00000455656 PREX1Q8TCU6 1659 aa18.6■□□□□ 0.57
TMEM56-202ENST00000455656 FGD6Q6ZV73 1430 aa18.59■□□□□ 0.57
TMEM56-202ENST00000455656 DHX29Q7Z478 1369 aaKnown RBP18.59■□□□□ 0.57
TMEM56-202ENST00000455656 CEBPAP49715 358 aaPredicted RBP18.59■□□□□ 0.57
TMEM56-202ENST00000455656 DNMT1P26358 1616 aaKnown RBP18.58■□□□□ 0.56
TMEM56-202ENST00000455656 CNTLNQ9NXG0 1405 aa18.57■□□□□ 0.56
TMEM56-202ENST00000455656 PLPPR3Q6T4P5 718 aa18.56■□□□□ 0.56
TMEM56-202ENST00000455656 SETD1BQ9UPS6 1966 aaKnown RBP18.55■□□□□ 0.56
TMEM56-202ENST00000455656 ABCC5O15440 1437 aa18.55■□□□□ 0.56
TMEM56-202ENST00000455656 SHANK2Q9UPX8 1470 aa18.54■□□□□ 0.56
TMEM56-202ENST00000455656 RNF17Q9BXT8 1623 aaKnown RBP18.52■□□□□ 0.56
TMEM56-202ENST00000455656 EIF2AK4Q9P2K8 1649 aaKnown RBP18.52■□□□□ 0.56
TMEM56-202ENST00000455656 TSPY4P0CV99 314 aa18.52■□□□□ 0.56
TMEM56-202ENST00000455656 TSPY10P0CW01 314 aa18.52■□□□□ 0.56
TMEM56-202ENST00000455656 DAPK1P53355 1430 aa18.51■□□□□ 0.55
TMEM56-202ENST00000455656 MROH1Q8NDA8 1641 aa18.5■□□□□ 0.55
TMEM56-202ENST00000455656 ZMYM3Q14202 1370 aa18.5■□□□□ 0.55
TMEM56-202ENST00000455656 FAM135AQ9P2D6 1515 aa18.49■□□□□ 0.55
TMEM56-202ENST00000455656 GGT6Q6P531 493 aa18.49■□□□□ 0.55
TMEM56-202ENST00000455656 HSPA2P54652 639 aa18.48■□□□□ 0.55
TMEM56-202ENST00000455656 KIF3BO15066 747 aa18.47■□□□□ 0.55
TMEM56-202ENST00000455656 PPP6R1Q9UPN7 881 aa18.47■□□□□ 0.55
TMEM56-202ENST00000455656 KDM5DQ9BY66 1539 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms