RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 PLPPR3Q6T4P5 718 aa39.07■■■■□ 3.85
LYSMD2-202ENST00000454181 YEATS2Q9ULM3 1422 aa39.06■■■■□ 3.84
LYSMD2-202ENST00000454181 RIMS1Q86UR5 1692 aaKnown RBP39.03■■■■□ 3.84
LYSMD2-202ENST00000454181 MLECQ14165 292 aa39.03■■■■□ 3.84
LYSMD2-202ENST00000454181 PCF11O94913 1555 aaKnown RBP39.02■■■■□ 3.84
LYSMD2-202ENST00000454181 LMTK3Q96Q04 1460 aa38.97■■■■□ 3.83
LYSMD2-202ENST00000454181 FBXO41Q8TF61 875 aa38.96■■■■□ 3.83
LYSMD2-202ENST00000454181 CLIP1P30622 1438 aa38.95■■■■□ 3.83
LYSMD2-202ENST00000454181 TROQ12816 1431 aaPredicted RBP38.93■■■■□ 3.82
LYSMD2-202ENST00000454181 MYO5CQ9NQX4 1742 aa38.92■■■■□ 3.82
LYSMD2-202ENST00000454181 KIF14Q15058 1648 aa38.91■■■■□ 3.82
LYSMD2-202ENST00000454181 MYT1LQ9UL68 1186 aa38.89■■■■□ 3.82
LYSMD2-202ENST00000454181 ATP10AO60312 1499 aa38.89■■■■□ 3.82
LYSMD2-202ENST00000454181 ARHGAP5Q13017 1502 aa38.86■■■■□ 3.81
LYSMD2-202ENST00000454181 HSPA2P54652 639 aa38.86■■■■□ 3.81
LYSMD2-202ENST00000454181 C9orf84Q5VXU9 1444 aa38.84■■■■□ 3.81
LYSMD2-202ENST00000454181 SIGLEC1Q9BZZ2 1709 aa38.83■■■■□ 3.81
LYSMD2-202ENST00000454181 ZNF518AQ6AHZ1 1483 aa38.82■■■■□ 3.81
LYSMD2-202ENST00000454181 AFAP1Q8N556 730 aa38.81■■■■□ 3.8
LYSMD2-202ENST00000454181 FER1L4A9Z1Z3 1794 aa38.77■■■■□ 3.8
LYSMD2-202ENST00000454181 CASKIN1Q8WXD9 1431 aa38.72■■■■□ 3.79
LYSMD2-202ENST00000454181 ARHGEF12Q9NZN5 1544 aa38.71■■■■□ 3.79
LYSMD2-202ENST00000454181 CCDC18Q5T9S5 1454 aa38.71■■■■□ 3.79
LYSMD2-202ENST00000454181 LRRIQ1Q96JM4 1722 aa38.67■■■■□ 3.78
LYSMD2-202ENST00000454181 KDM5CP41229 1560 aa38.65■■■■□ 3.78
LYSMD2-202ENST00000454181 CEBPAP49715 358 aaPredicted RBP38.65■■■■□ 3.78
LYSMD2-202ENST00000454181 ESF1Q9H501 851 aaKnown RBP38.59■■■■□ 3.77
LYSMD2-202ENST00000454181 CDC42BPBQ9Y5S2 1711 aa38.59■■■■□ 3.77
LYSMD2-202ENST00000454181 MLH3Q9UHC1 1453 aa38.58■■■■□ 3.77
LYSMD2-202ENST00000454181 PREX2Q70Z35 1606 aa38.56■■■■□ 3.76
LYSMD2-202ENST00000454181 DIP2CQ9Y2E4 1556 aa38.55■■■■□ 3.76
LYSMD2-202ENST00000454181 TRAPPC8Q9Y2L5 1435 aa38.55■■■■□ 3.76
LYSMD2-202ENST00000454181 FYCO1Q9BQS8 1478 aa38.53■■■■□ 3.76
LYSMD2-202ENST00000454181 ZNF777Q9ULD5 760 aaPredicted RBP38.52■■■■□ 3.76
LYSMD2-202ENST00000454181 ABCC1P33527 1531 aa38.52■■■■□ 3.76
LYSMD2-202ENST00000454181 PREX1Q8TCU6 1659 aa38.5■■■■□ 3.75
LYSMD2-202ENST00000454181 REREQ9P2R6 1566 aa38.5■■■■□ 3.75
LYSMD2-202ENST00000454181 CERKQ8TCT0 537 aa38.48■■■■□ 3.75
LYSMD2-202ENST00000454181 UHRF1BP1Q6BDS2 1440 aa38.47■■■■□ 3.75
LYSMD2-202ENST00000454181 ABCA6Q8N139 1617 aa38.46■■■■□ 3.75
LYSMD2-202ENST00000454181 DMRT2Q9Y5R5 561 aa38.46■■■■□ 3.75
LYSMD2-202ENST00000454181 ITSN2Q9NZM3 1697 aa38.43■■■■□ 3.74
LYSMD2-202ENST00000454181 AGLP35573 1532 aa38.43■■■■□ 3.74
LYSMD2-202ENST00000454181 CDC42BPAQ5VT25 1732 aa38.4■■■■□ 3.74
LYSMD2-202ENST00000454181 SETD1BQ9UPS6 1966 aaKnown RBP38.37■■■■□ 3.73
LYSMD2-202ENST00000454181 SPAG9O60271 1321 aaKnown RBP38.36■■■■□ 3.73
LYSMD2-202ENST00000454181 GPATCH8Q9UKJ3 1502 aaKnown RBP38.34■■■■□ 3.73
LYSMD2-202ENST00000454181 HNRNPMP52272 730 aaKnown RBP eCLIP38.34■■■■□ 3.73
LYSMD2-202ENST00000454181 CFDP1Q9UEE9 299 aaPredicted RBP38.34■■■■□ 3.73
LYSMD2-202ENST00000454181 KIDINS220Q9ULH0 1771 aa38.33■■■■□ 3.73
LYSMD2-202ENST00000454181 CNTLNQ9NXG0 1405 aa38.31■■■■□ 3.72
LYSMD2-202ENST00000454181 CCNB3Q8WWL7 1395 aa38.3■■■■□ 3.72
LYSMD2-202ENST00000454181 SAMD9LQ8IVG5 1584 aa38.29■■■■□ 3.72
LYSMD2-202ENST00000454181 C3P01024 1663 aa38.29■■■■□ 3.72
LYSMD2-202ENST00000454181 MTUS2Q5JR59 1369 aa38.28■■■■□ 3.72
LYSMD2-202ENST00000454181 SYCP2Q9BX26 1530 aa38.28■■■■□ 3.72
LYSMD2-202ENST00000454181 PLEKHH2Q8IVE3 1493 aa38.26■■■■□ 3.72
LYSMD2-202ENST00000454181 KIAA1107Q9UPP5 1409 aa38.23■■■■□ 3.71
LYSMD2-202ENST00000454181 STRCQ7RTU9 1775 aa38.21■■■■□ 3.71
LYSMD2-202ENST00000454181 PTPRTO14522 1441 aa38.15■■■■□ 3.7
LYSMD2-202ENST00000454181 ATP7AQ04656 1500 aa38.15■■■■□ 3.7
LYSMD2-202ENST00000454181 ZMYM3Q14202 1370 aa38.15■■■■□ 3.7
LYSMD2-202ENST00000454181 SUPT6HQ7KZ85 1726 aaKnown RBP38.11■■■■□ 3.69
LYSMD2-202ENST00000454181 NPATQ14207 1427 aa38.11■■■■□ 3.69
LYSMD2-202ENST00000454181 A2MP01023 1474 aa38.1■■■■□ 3.69
LYSMD2-202ENST00000454181 GGT6Q6P531 493 aa38.09■■■■□ 3.69
LYSMD2-202ENST00000454181 MROH2AA6NES4 1674 aa38.06■■■■□ 3.68
LYSMD2-202ENST00000454181 INO80Q9ULG1 1556 aaPredicted RBP38.05■■■■□ 3.68
LYSMD2-202ENST00000454181 ZNF644Q9H582 1327 aaPredicted RBP38.04■■■■□ 3.68
LYSMD2-202ENST00000454181 NCOA1Q15788 1441 aa38.03■■■■□ 3.68
LYSMD2-202ENST00000454181 EHBP1L1Q8N3D4 1523 aa38.01■■■■□ 3.67
LYSMD2-202ENST00000454181 PPP6R1Q9UPN7 881 aa38■■■■□ 3.67
LYSMD2-202ENST00000454181 PLXNC1O60486 1568 aa38■■■■□ 3.67
LYSMD2-202ENST00000454181 TIAM1Q13009 1591 aa37.97■■■■□ 3.67
LYSMD2-202ENST00000454181 CLTCQ00610 1675 aaKnown RBP37.96■■■■□ 3.67
LYSMD2-202ENST00000454181 CAMSAP1Q5T5Y3 1602 aa37.96■■■■□ 3.67
LYSMD2-202ENST00000454181 CEP162Q5TB80 1403 aa37.95■■■■□ 3.67
LYSMD2-202ENST00000454181 MBD5Q9P267 1494 aa37.91■■■■□ 3.66
LYSMD2-202ENST00000454181 ADGBQ8N7X0 1667 aa37.91■■■■□ 3.66
LYSMD2-202ENST00000454181 NCKAP5LQ9HCH0 1330 aa37.9■■■■□ 3.66
LYSMD2-202ENST00000454181 RTEL1-TNFRSF6BF6WH68 1400 aa37.9■■■■□ 3.66
LYSMD2-202ENST00000454181 PTPRKQ15262 1439 aa37.89■■■■□ 3.66
LYSMD2-202ENST00000454181 PKD2Q13563 968 aa37.86■■■■□ 3.65
LYSMD2-202ENST00000454181 DHX29Q7Z478 1369 aaKnown RBP37.85■■■■□ 3.65
LYSMD2-202ENST00000454181 RSPH4AQ5TD94 716 aa37.85■■■■□ 3.65
LYSMD2-202ENST00000454181 LTBP4Q8N2S1 1624 aa37.85■■■■□ 3.65
LYSMD2-202ENST00000454181 MYO3AQ8NEV4 1616 aa37.81■■■■□ 3.64
LYSMD2-202ENST00000454181 KIF3BO15066 747 aa37.81■■■■□ 3.64
LYSMD2-202ENST00000454181 NCOA2Q15596 1464 aa37.8■■■■□ 3.64
LYSMD2-202ENST00000454181 IQSEC2Q5JU85 1478 aa37.79■■■■□ 3.64
LYSMD2-202ENST00000454181 CEP170BQ9Y4F5 1589 aaPredicted RBP37.79■■■■□ 3.64
LYSMD2-202ENST00000454181 PLA2R1Q13018 1463 aa37.78■■■■□ 3.64
LYSMD2-202ENST00000454181 CCDC141Q6ZP82 1450 aa37.78■■■■□ 3.64
LYSMD2-202ENST00000454181 DISP3Q9P2K9 1392 aa37.78■■■■□ 3.64
LYSMD2-202ENST00000454181 ZNF142P52746 1687 aaPredicted RBP37.76■■■■□ 3.63
LYSMD2-202ENST00000454181 CAMSAP2Q08AD1 1489 aa37.75■■■■□ 3.63
LYSMD2-202ENST00000454181 TSPY4P0CV99 314 aa37.74■■■■□ 3.63
LYSMD2-202ENST00000454181 TSPY10P0CW01 314 aa37.74■■■■□ 3.63
LYSMD2-202ENST00000454181 ZNF335Q9H4Z2 1342 aaPredicted RBP37.74■■■■□ 3.63
LYSMD2-202ENST00000454181 WASHC2CQ9Y4E1 1318 aa37.71■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms