RNA–Protein interactions for RNA: ENST00000453121.1

NEGR1-IT1-201, NEGR1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene NEGR1-IT1, Length 534 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEGR1-IT1-201ENST00000453121 PCDH10Q9P2E7 1040 aa10.32□□□□□ -0.76
NEGR1-IT1-201ENST00000453121 MICALL2Q8IY33 904 aa10.28□□□□□ -0.76
NEGR1-IT1-201ENST00000453121 POTEGQ6S5H5 508 aa10.25□□□□□ -0.77
NEGR1-IT1-201ENST00000453121 FAM163AQ96GL9 167 aaPredicted RBP10.25□□□□□ -0.77
NEGR1-IT1-201ENST00000453121 TSHZ2Q9NRE2 1034 aa10.25□□□□□ -0.77
NEGR1-IT1-201ENST00000453121 HAP1P54257 671 aaPredicted RBP10.24□□□□□ -0.77
NEGR1-IT1-201ENST00000453121 LCE2DQ5TA82 110 aaPredicted RBP10.22□□□□□ -0.77
NEGR1-IT1-201ENST00000453121 SNPHO15079 494 aa10.2□□□□□ -0.78
NEGR1-IT1-201ENST00000453121 CADPS2Q86UW7 1296 aa10.19□□□□□ -0.78
NEGR1-IT1-201ENST00000453121 TMEM92Q6UXU6 159 aa10.18□□□□□ -0.78
NEGR1-IT1-201ENST00000453121 ST18O60284 1047 aa10.16□□□□□ -0.78
NEGR1-IT1-201ENST00000453121 SLC24A1O60721 1099 aa10.14□□□□□ -0.79
NEGR1-IT1-201ENST00000453121 NCKAP5LQ9HCH0 1330 aa10.1□□□□□ -0.79
NEGR1-IT1-201ENST00000453121 HOXB3P14651 431 aaPredicted RBP10.1□□□□□ -0.79
NEGR1-IT1-201ENST00000453121 CRISPLD2Q9H0B8 497 aa10.09□□□□□ -0.79
NEGR1-IT1-201ENST00000453121 KDM2AQ9Y2K7 1162 aa10.09□□□□□ -0.79
NEGR1-IT1-201ENST00000453121 KIF3CO14782 793 aa10.08□□□□□ -0.8
NEGR1-IT1-201ENST00000453121 VSIG10Q8N0Z9 540 aa10.08□□□□□ -0.8
NEGR1-IT1-201ENST00000453121 PDE4AP27815 886 aa10.07□□□□□ -0.8
NEGR1-IT1-201ENST00000453121 DOK7Q18PE1 504 aa10.07□□□□□ -0.8
NEGR1-IT1-201ENST00000453121 C2orf72A6NCS6 295 aa10.06□□□□□ -0.8
NEGR1-IT1-201ENST00000453121 GPHNQ9NQX3 736 aaPredicted RBP10.06□□□□□ -0.8
NEGR1-IT1-201ENST00000453121 LARP6Q9BRS8 491 aaKnown RBP10.05□□□□□ -0.8
NEGR1-IT1-201ENST00000453121 ZNF710Q8N1W2 664 aa10.04□□□□□ -0.8
NEGR1-IT1-201ENST00000453121 TMC2Q8TDI7 906 aa10.04□□□□□ -0.8
NEGR1-IT1-201ENST00000453121 MARVELD3Q96A59 401 aa10.03□□□□□ -0.8
NEGR1-IT1-201ENST00000453121 RIMBP2O15034 1052 aa10.02□□□□□ -0.81
NEGR1-IT1-201ENST00000453121 MFSD10Q14728 455 aa10.01□□□□□ -0.81
NEGR1-IT1-201ENST00000453121 DSG2Q14126 1118 aa10□□□□□ -0.81
NEGR1-IT1-201ENST00000453121 HOXB1P14653 301 aaPredicted RBP9.99□□□□□ -0.81
NEGR1-IT1-201ENST00000453121 FOXK1P85037 733 aa9.99□□□□□ -0.81
NEGR1-IT1-201ENST00000453121 DDX27Q96GQ7 796 aaKnown RBP9.99□□□□□ -0.81
NEGR1-IT1-201ENST00000453121 ZSWIM6Q9HCJ5 1215 aa9.99□□□□□ -0.81
NEGR1-IT1-201ENST00000453121 EMP3P54852 163 aa9.98□□□□□ -0.81
NEGR1-IT1-201ENST00000453121 PPP1R15BQ5SWA1 713 aa9.98□□□□□ -0.81
NEGR1-IT1-201ENST00000453121 WDR70Q9NW82 654 aa9.98□□□□□ -0.81
NEGR1-IT1-201ENST00000453121 GPR153Q6NV75 609 aa9.96□□□□□ -0.82
NEGR1-IT1-201ENST00000453121 PLPP6Q8IY26 295 aa9.96□□□□□ -0.82
NEGR1-IT1-201ENST00000453121 SLC34A2O95436 690 aa9.93□□□□□ -0.82
NEGR1-IT1-201ENST00000453121 CDAN1Q8IWY9 1227 aa9.93□□□□□ -0.82
NEGR1-IT1-201ENST00000453121 FAM205CA6NFA0 338 aa9.92□□□□□ -0.82
NEGR1-IT1-201ENST00000453121 ARSIQ5FYB1 569 aa9.92□□□□□ -0.82
NEGR1-IT1-201ENST00000453121 E2F4Q16254 413 aa9.91□□□□□ -0.82
NEGR1-IT1-201ENST00000453121 CAMK2BQ13554 666 aa9.9□□□□□ -0.82
NEGR1-IT1-201ENST00000453121 HS3ST6Q96QI5 342 aa9.9□□□□□ -0.82
NEGR1-IT1-201ENST00000453121 POTEB3A0JP26 581 aa9.89□□□□□ -0.83
NEGR1-IT1-201ENST00000453121 POTEBQ6S5H4 581 aa9.89□□□□□ -0.83
NEGR1-IT1-201ENST00000453121 KHSRPQ92945 711 aaKnown RBP eCLIP9.89□□□□□ -0.83
NEGR1-IT1-201ENST00000453121 EMILIN3Q9NT22 766 aa9.88□□□□□ -0.83
NEGR1-IT1-201ENST00000453121 PCDHGA4Q9Y5G9 962 aa9.88□□□□□ -0.83
NEGR1-IT1-201ENST00000453121 ERBB3P21860 1342 aa9.87□□□□□ -0.83
NEGR1-IT1-201ENST00000453121 KCNV2Q8TDN2 545 aa9.87□□□□□ -0.83
NEGR1-IT1-201ENST00000453121 PTCD2Q8WV60 388 aaKnown RBP9.87□□□□□ -0.83
NEGR1-IT1-201ENST00000453121 NUDT7P0C024 238 aa9.84□□□□□ -0.83
NEGR1-IT1-201ENST00000453121 VARS2Q5ST30 1063 aaKnown RBP9.84□□□□□ -0.83
NEGR1-IT1-201ENST00000453121 OXER1Q8TDS5 423 aa9.84□□□□□ -0.83
NEGR1-IT1-201ENST00000453121 UPF1Q92900 1129 aaKnown RBP eCLIP9.83□□□□□ -0.84
NEGR1-IT1-201ENST00000453121 P3H3Q8IVL6 736 aa9.82□□□□□ -0.84
NEGR1-IT1-201ENST00000453121 ZNF316A6NFI3 1004 aaPredicted RBP9.81□□□□□ -0.84
NEGR1-IT1-201ENST00000453121 ARHGEF1Q92888 912 aaKnown RBP9.81□□□□□ -0.84
NEGR1-IT1-201ENST00000453121 ARIH1Q9Y4X5 557 aaPredicted RBP9.81□□□□□ -0.84
NEGR1-IT1-201ENST00000453121 TBC1D12O60347 775 aa9.8□□□□□ -0.84
NEGR1-IT1-201ENST00000453121 KDM4FA0A1W2PPD8 638 aa9.79□□□□□ -0.84
NEGR1-IT1-201ENST00000453121 DPYSL4O14531 572 aa9.79□□□□□ -0.84
NEGR1-IT1-201ENST00000453121 MAP3K9P80192 1104 aa9.78□□□□□ -0.84
NEGR1-IT1-201ENST00000453121 LHX6Q9UPM6 363 aa9.78□□□□□ -0.84
NEGR1-IT1-201ENST00000453121 ZNF687Q8N1G0 1237 aa9.77□□□□□ -0.85
NEGR1-IT1-201ENST00000453121 KRTAP3-3Q9BYR6 98 aa9.77□□□□□ -0.85
NEGR1-IT1-201ENST00000453121 KRTAP3-2Q9BYR7 98 aa9.77□□□□□ -0.85
NEGR1-IT1-201ENST00000453121 EVI5O60447 810 aa9.72□□□□□ -0.85
NEGR1-IT1-201ENST00000453121 PDIA6Q15084 440 aa9.72□□□□□ -0.85
NEGR1-IT1-201ENST00000453121 PSDA5PKW4 1024 aaPredicted RBP9.71□□□□□ -0.86
NEGR1-IT1-201ENST00000453121 SPDYE16A6NNV3 312 aaPredicted RBP9.71□□□□□ -0.86
NEGR1-IT1-201ENST00000453121 ANO8Q9HCE9 1232 aaPredicted RBP9.7□□□□□ -0.86
NEGR1-IT1-201ENST00000453121 SPNS2Q8IVW8 549 aa9.69□□□□□ -0.86
NEGR1-IT1-201ENST00000453121 SEMA3EO15041 775 aa9.68□□□□□ -0.86
NEGR1-IT1-201ENST00000453121 NBR1Q14596 966 aa9.67□□□□□ -0.86
NEGR1-IT1-201ENST00000453121 PBX2P40425 430 aa9.65□□□□□ -0.86
NEGR1-IT1-201ENST00000453121 POTEEQ6S8J3 1075 aa9.65□□□□□ -0.86
NEGR1-IT1-201ENST00000453121 MLLT3P42568 568 aaPredicted RBP9.64□□□□□ -0.87
NEGR1-IT1-201ENST00000453121 PTGER2P43116 358 aa9.64□□□□□ -0.87
NEGR1-IT1-201ENST00000453121 PPP4R3BQ5MIZ7 849 aa9.64□□□□□ -0.87
NEGR1-IT1-201ENST00000453121 BCANQ96GW7 911 aa9.64□□□□□ -0.87
NEGR1-IT1-201ENST00000453121 TESPA1A2RU30 521 aaPredicted RBP9.63□□□□□ -0.87
NEGR1-IT1-201ENST00000453121 DDX12PQ92771 950 aa9.62□□□□□ -0.87
NEGR1-IT1-201ENST00000453121 AXIN2Q9Y2T1 843 aa9.62□□□□□ -0.87
NEGR1-IT1-201ENST00000453121 LSM11P83369 360 aaKnown RBP eCLIP9.61□□□□□ -0.87
NEGR1-IT1-201ENST00000453121 MMRN1Q13201 1228 aa9.61□□□□□ -0.87
NEGR1-IT1-201ENST00000453121 ZNF454Q8N9F8 522 aa9.61□□□□□ -0.87
NEGR1-IT1-201ENST00000453121 GRXCR2A6NFK2 248 aa9.6□□□□□ -0.87
NEGR1-IT1-201ENST00000453121 ARHGAP33O14559 1287 aa9.6□□□□□ -0.87
NEGR1-IT1-201ENST00000453121 FOSBP53539 338 aa9.6□□□□□ -0.87
NEGR1-IT1-201ENST00000453121 ANKRD13DQ6ZTN6 518 aa9.59□□□□□ -0.87
NEGR1-IT1-201ENST00000453121 JPH4Q96JJ6 628 aa9.59□□□□□ -0.87
NEGR1-IT1-201ENST00000453121 PCDHGA10Q9Y5H3 936 aa9.59□□□□□ -0.87
NEGR1-IT1-201ENST00000453121 PHF14O94880 888 aa9.57□□□□□ -0.88
NEGR1-IT1-201ENST00000453121 OSBPP22059 807 aa9.56□□□□□ -0.88
NEGR1-IT1-201ENST00000453121 PSEN2P49810 448 aa9.56□□□□□ -0.88
NEGR1-IT1-201ENST00000453121 BCL2L12Q9HB09 334 aa9.56□□□□□ -0.88
NEGR1-IT1-201ENST00000453121 PRIM1P49642 420 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms