RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 FER1L4A9Z1Z3 1794 aa19.34■□□□□ 0.69
GARNL3-210ENST00000453030 CHIC1Q5VXU3 224 aa19.33■□□□□ 0.68
GARNL3-210ENST00000453030 POGZQ7Z3K3 1410 aa19.33■□□□□ 0.68
GARNL3-210ENST00000453030 PLCH2O75038 1416 aa19.32■□□□□ 0.68
GARNL3-210ENST00000453030 SCAPERQ9BY12 1400 aa19.3■□□□□ 0.68
GARNL3-210ENST00000453030 MAGI2Q86UL8 1455 aa19.29■□□□□ 0.68
GARNL3-210ENST00000453030 LMTK3Q96Q04 1460 aa19.29■□□□□ 0.68
GARNL3-210ENST00000453030 ARHGAP5Q13017 1502 aa19.27■□□□□ 0.68
GARNL3-210ENST00000453030 TROQ12816 1431 aaPredicted RBP19.26■□□□□ 0.67
GARNL3-210ENST00000453030 PLPPR3Q6T4P5 718 aa19.26■□□□□ 0.67
GARNL3-210ENST00000453030 CDC42BPBQ9Y5S2 1711 aa19.25■□□□□ 0.67
GARNL3-210ENST00000453030 CLIP1P30622 1438 aa19.25■□□□□ 0.67
GARNL3-210ENST00000453030 CDK11AQ9UQ88 783 aaPredicted RBP19.24■□□□□ 0.67
GARNL3-210ENST00000453030 MLECQ14165 292 aa19.23■□□□□ 0.67
GARNL3-210ENST00000453030 PREX2Q70Z35 1606 aa19.22■□□□□ 0.67
GARNL3-210ENST00000453030 KDM5CP41229 1560 aa19.21■□□□□ 0.67
GARNL3-210ENST00000453030 EFCAB2Q5VUJ9 269 aa19.21■□□□□ 0.67
GARNL3-210ENST00000453030 C9orf84Q5VXU9 1444 aa19.21■□□□□ 0.67
GARNL3-210ENST00000453030 ZNF518AQ6AHZ1 1483 aa19.21■□□□□ 0.67
GARNL3-210ENST00000453030 ATP10AO60312 1499 aa19.19■□□□□ 0.66
GARNL3-210ENST00000453030 CCDC18Q5T9S5 1454 aa19.19■□□□□ 0.66
GARNL3-210ENST00000453030 ARHGEF12Q9NZN5 1544 aa19.19■□□□□ 0.66
GARNL3-210ENST00000453030 ITSN2Q9NZM3 1697 aa19.18■□□□□ 0.66
GARNL3-210ENST00000453030 CDC42BPAQ5VT25 1732 aa19.18■□□□□ 0.66
GARNL3-210ENST00000453030 DIP2CQ9Y2E4 1556 aa19.17■□□□□ 0.66
GARNL3-210ENST00000453030 ABCA6Q8N139 1617 aa19.17■□□□□ 0.66
GARNL3-210ENST00000453030 CASKIN1Q8WXD9 1431 aa19.17■□□□□ 0.66
GARNL3-210ENST00000453030 PREX1Q8TCU6 1659 aa19.16■□□□□ 0.66
GARNL3-210ENST00000453030 ABCC1P33527 1531 aa19.15■□□□□ 0.66
GARNL3-210ENST00000453030 HSPA2P54652 639 aa19.15■□□□□ 0.66
GARNL3-210ENST00000453030 FYCO1Q9BQS8 1478 aa19.13■□□□□ 0.65
GARNL3-210ENST00000453030 AFAP1Q8N556 730 aa19.12■□□□□ 0.65
GARNL3-210ENST00000453030 MYT1LQ9UL68 1186 aa19.12■□□□□ 0.65
GARNL3-210ENST00000453030 REREQ9P2R6 1566 aa19.1■□□□□ 0.65
GARNL3-210ENST00000453030 FBXO41Q8TF61 875 aa19.1■□□□□ 0.65
GARNL3-210ENST00000453030 KIDINS220Q9ULH0 1771 aa19.09■□□□□ 0.65
GARNL3-210ENST00000453030 TRAPPC8Q9Y2L5 1435 aa19.08■□□□□ 0.64
GARNL3-210ENST00000453030 MLH3Q9UHC1 1453 aa19.07■□□□□ 0.64
GARNL3-210ENST00000453030 C3P01024 1663 aa19.07■□□□□ 0.64
GARNL3-210ENST00000453030 SAMD9LQ8IVG5 1584 aa19.06■□□□□ 0.64
GARNL3-210ENST00000453030 CEBPAP49715 358 aaPredicted RBP19.04■□□□□ 0.64
GARNL3-210ENST00000453030 SYCP2Q9BX26 1530 aa19.04■□□□□ 0.64
GARNL3-210ENST00000453030 SETD1BQ9UPS6 1966 aaKnown RBP19.03■□□□□ 0.64
GARNL3-210ENST00000453030 AGLP35573 1532 aa19.01■□□□□ 0.63
GARNL3-210ENST00000453030 STRCQ7RTU9 1775 aa19.01■□□□□ 0.63
GARNL3-210ENST00000453030 SUPT6HQ7KZ85 1726 aaKnown RBP19■□□□□ 0.63
GARNL3-210ENST00000453030 UHRF1BP1Q6BDS2 1440 aa18.99■□□□□ 0.63
GARNL3-210ENST00000453030 ZNF777Q9ULD5 760 aaPredicted RBP18.98■□□□□ 0.63
GARNL3-210ENST00000453030 GPATCH8Q9UKJ3 1502 aaKnown RBP18.98■□□□□ 0.63
GARNL3-210ENST00000453030 INO80Q9ULG1 1556 aaPredicted RBP18.95■□□□□ 0.62
GARNL3-210ENST00000453030 ATP7AQ04656 1500 aa18.95■□□□□ 0.62
GARNL3-210ENST00000453030 MROH2AA6NES4 1674 aa18.94■□□□□ 0.62
GARNL3-210ENST00000453030 ESF1Q9H501 851 aaKnown RBP18.93■□□□□ 0.62
GARNL3-210ENST00000453030 TIAM1Q13009 1591 aa18.92■□□□□ 0.62
GARNL3-210ENST00000453030 MTUS2Q5JR59 1369 aa18.92■□□□□ 0.62
GARNL3-210ENST00000453030 CLTCQ00610 1675 aaKnown RBP18.91■□□□□ 0.62
GARNL3-210ENST00000453030 CCNB3Q8WWL7 1395 aa18.91■□□□□ 0.62
GARNL3-210ENST00000453030 PLEKHH2Q8IVE3 1493 aa18.9■□□□□ 0.62
GARNL3-210ENST00000453030 EHBP1L1Q8N3D4 1523 aa18.9■□□□□ 0.62
GARNL3-210ENST00000453030 PLXNC1O60486 1568 aa18.9■□□□□ 0.62
GARNL3-210ENST00000453030 HNRNPMP52272 730 aaKnown RBP eCLIP18.9■□□□□ 0.62
GARNL3-210ENST00000453030 SPAG9O60271 1321 aaKnown RBP18.9■□□□□ 0.62
GARNL3-210ENST00000453030 CNTLNQ9NXG0 1405 aa18.9■□□□□ 0.62
GARNL3-210ENST00000453030 CERKQ8TCT0 537 aa18.89■□□□□ 0.61
GARNL3-210ENST00000453030 CFDP1Q9UEE9 299 aaPredicted RBP18.88■□□□□ 0.61
GARNL3-210ENST00000453030 ADGBQ8N7X0 1667 aa18.88■□□□□ 0.61
GARNL3-210ENST00000453030 KIAA1107Q9UPP5 1409 aa18.87■□□□□ 0.61
GARNL3-210ENST00000453030 CEP162Q5TB80 1403 aa18.85■□□□□ 0.61
GARNL3-210ENST00000453030 A2MP01023 1474 aa18.84■□□□□ 0.61
GARNL3-210ENST00000453030 MYO3AQ8NEV4 1616 aa18.84■□□□□ 0.61
GARNL3-210ENST00000453030 ZNF142P52746 1687 aaPredicted RBP18.82■□□□□ 0.6
GARNL3-210ENST00000453030 DMRT2Q9Y5R5 561 aa18.82■□□□□ 0.6
GARNL3-210ENST00000453030 NPATQ14207 1427 aa18.81■□□□□ 0.6
GARNL3-210ENST00000453030 CAMSAP1Q5T5Y3 1602 aa18.81■□□□□ 0.6
GARNL3-210ENST00000453030 PTPRTO14522 1441 aa18.8■□□□□ 0.6
GARNL3-210ENST00000453030 NCOA1Q15788 1441 aa18.8■□□□□ 0.6
GARNL3-210ENST00000453030 ZNF644Q9H582 1327 aaPredicted RBP18.79■□□□□ 0.6
GARNL3-210ENST00000453030 ZMYM3Q14202 1370 aa18.79■□□□□ 0.6
GARNL3-210ENST00000453030 MBD5Q9P267 1494 aa18.77■□□□□ 0.6
GARNL3-210ENST00000453030 CEP170BQ9Y4F5 1589 aaPredicted RBP18.76■□□□□ 0.59
GARNL3-210ENST00000453030 GGT6Q6P531 493 aa18.75■□□□□ 0.59
GARNL3-210ENST00000453030 CAMSAP2Q08AD1 1489 aa18.75■□□□□ 0.59
GARNL3-210ENST00000453030 NCOA2Q15596 1464 aa18.75■□□□□ 0.59
GARNL3-210ENST00000453030 LTBP4Q8N2S1 1624 aa18.74■□□□□ 0.59
GARNL3-210ENST00000453030 CCDC141Q6ZP82 1450 aa18.73■□□□□ 0.59
GARNL3-210ENST00000453030 PTPRKQ15262 1439 aa18.73■□□□□ 0.59
GARNL3-210ENST00000453030 RTEL1-TNFRSF6BF6WH68 1400 aa18.71■□□□□ 0.59
GARNL3-210ENST00000453030 POLR1AO95602 1720 aaPredicted RBP18.68■□□□□ 0.58
GARNL3-210ENST00000453030 PLA2R1Q13018 1463 aa18.67■□□□□ 0.58
GARNL3-210ENST00000453030 KDM5DQ9BY66 1539 aa18.67■□□□□ 0.58
GARNL3-210ENST00000453030 NCKAP5LQ9HCH0 1330 aa18.67■□□□□ 0.58
GARNL3-210ENST00000453030 ARHGEF5Q12774 1597 aa18.67■□□□□ 0.58
GARNL3-210ENST00000453030 DHX29Q7Z478 1369 aaKnown RBP18.67■□□□□ 0.58
GARNL3-210ENST00000453030 DNMT1P26358 1616 aaKnown RBP18.66■□□□□ 0.58
GARNL3-210ENST00000453030 VPS8Q8N3P4 1428 aa18.65■□□□□ 0.58
GARNL3-210ENST00000453030 TCOF1Q13428 1488 aaKnown RBP18.65■□□□□ 0.58
GARNL3-210ENST00000453030 IQSEC2Q5JU85 1478 aa18.65■□□□□ 0.58
GARNL3-210ENST00000453030 A2ML1A8K2U0 1454 aa18.63■□□□□ 0.57
GARNL3-210ENST00000453030 LRRC9Q6ZRR7 1453 aa18.63■□□□□ 0.57
GARNL3-210ENST00000453030 FAM135AQ9P2D6 1515 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms