RNA–Protein interactions for RNA: ENST00000452564.1

PIKFYVE-207, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 2

Gene PIKFYVE, Length 4,214 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-207ENST00000452564 DENND4BO75064 1496 aaPredicted RBP11.99□□□□□ -0.49
PIKFYVE-207ENST00000452564 CDC42BPAQ5VT25 1732 aa11.99□□□□□ -0.49
PIKFYVE-207ENST00000452564 FANCAO15360 1455 aa11.99□□□□□ -0.49
PIKFYVE-207ENST00000452564 PLXNC1O60486 1568 aa11.99□□□□□ -0.49
PIKFYVE-207ENST00000452564 PLCH2O75038 1416 aa11.98□□□□□ -0.49
PIKFYVE-207ENST00000452564 IQSEC2Q5JU85 1478 aa11.97□□□□□ -0.49
PIKFYVE-207ENST00000452564 YEATS2Q9ULM3 1422 aa11.97□□□□□ -0.49
PIKFYVE-207ENST00000452564 ABCC1P33527 1531 aa11.96□□□□□ -0.49
PIKFYVE-207ENST00000452564 CDK13Q14004 1512 aaKnown RBP11.95□□□□□ -0.5
PIKFYVE-207ENST00000452564 MLH3Q9UHC1 1453 aa11.93□□□□□ -0.5
PIKFYVE-207ENST00000452564 INO80Q9ULG1 1556 aaPredicted RBP11.93□□□□□ -0.5
PIKFYVE-207ENST00000452564 C9orf84Q5VXU9 1444 aa11.92□□□□□ -0.5
PIKFYVE-207ENST00000452564 ATP10AO60312 1499 aa11.92□□□□□ -0.5
PIKFYVE-207ENST00000452564 ARHGAP35Q9NRY4 1499 aa11.91□□□□□ -0.5
PIKFYVE-207ENST00000452564 RAPGEF3O95398 923 aa11.87□□□□□ -0.51
PIKFYVE-207ENST00000452564 PTPRTO14522 1441 aa11.87□□□□□ -0.51
PIKFYVE-207ENST00000452564 ZNF518AQ6AHZ1 1483 aa11.87□□□□□ -0.51
PIKFYVE-207ENST00000452564 SAMD9LQ8IVG5 1584 aa11.87□□□□□ -0.51
PIKFYVE-207ENST00000452564 MYO3AQ8NEV4 1616 aa11.87□□□□□ -0.51
PIKFYVE-207ENST00000452564 ADGBQ8N7X0 1667 aa11.85□□□□□ -0.51
PIKFYVE-207ENST00000452564 SETD1BQ9UPS6 1966 aaKnown RBP11.85□□□□□ -0.51
PIKFYVE-207ENST00000452564 ALKQ9UM73 1620 aa11.83□□□□□ -0.51
PIKFYVE-207ENST00000452564 TROQ12816 1431 aaPredicted RBP11.82□□□□□ -0.52
PIKFYVE-207ENST00000452564 FAM135AQ9P2D6 1515 aa11.82□□□□□ -0.52
PIKFYVE-207ENST00000452564 CSRNP3Q8WYN3 585 aa11.81□□□□□ -0.52
PIKFYVE-207ENST00000452564 POLR1AO95602 1720 aaPredicted RBP11.81□□□□□ -0.52
PIKFYVE-207ENST00000452564 KCNH8Q96L42 1107 aa11.81□□□□□ -0.52
PIKFYVE-207ENST00000452564 NPATQ14207 1427 aa11.8□□□□□ -0.52
PIKFYVE-207ENST00000452564 NCOA1Q15788 1441 aa11.8□□□□□ -0.52
PIKFYVE-207ENST00000452564 SCAPERQ9BY12 1400 aa11.8□□□□□ -0.52
PIKFYVE-207ENST00000452564 TCOF1Q13428 1488 aaKnown RBP11.79□□□□□ -0.52
PIKFYVE-207ENST00000452564 NEURL4Q96JN8 1562 aa11.79□□□□□ -0.52
PIKFYVE-207ENST00000452564 FMN1Q68DA7 1419 aa11.79□□□□□ -0.52
PIKFYVE-207ENST00000452564 CLTCQ00610 1675 aaKnown RBP11.78□□□□□ -0.52
PIKFYVE-207ENST00000452564 PLA2R1Q13018 1463 aa11.78□□□□□ -0.52
PIKFYVE-207ENST00000452564 CCDC18Q5T9S5 1454 aa11.78□□□□□ -0.52
PIKFYVE-207ENST00000452564 CASKIN1Q8WXD9 1431 aa11.78□□□□□ -0.52
PIKFYVE-207ENST00000452564 SPATA31D1Q6ZQQ2 1576 aa11.78□□□□□ -0.52
PIKFYVE-207ENST00000452564 TTBK1Q5TCY1 1321 aaPredicted RBP11.77□□□□□ -0.53
PIKFYVE-207ENST00000452564 FYCO1Q9BQS8 1478 aa11.75□□□□□ -0.53
PIKFYVE-207ENST00000452564 DEPDC5O75140 1603 aa11.75□□□□□ -0.53
PIKFYVE-207ENST00000452564 TRAPPC8Q9Y2L5 1435 aa11.75□□□□□ -0.53
PIKFYVE-207ENST00000452564 SUPT6HQ7KZ85 1726 aaKnown RBP11.74□□□□□ -0.53
PIKFYVE-207ENST00000452564 DNMT1P26358 1616 aaKnown RBP11.73□□□□□ -0.53
PIKFYVE-207ENST00000452564 CEP170BQ9Y4F5 1589 aaPredicted RBP11.73□□□□□ -0.53
PIKFYVE-207ENST00000452564 RNF17Q9BXT8 1623 aaKnown RBP11.73□□□□□ -0.53
PIKFYVE-207ENST00000452564 STRCP1A6NGW2 1772 aa11.73□□□□□ -0.53
PIKFYVE-207ENST00000452564 ARHGAP5Q13017 1502 aa11.73□□□□□ -0.53
PIKFYVE-207ENST00000452564 TIAM1Q13009 1591 aa11.72□□□□□ -0.53
PIKFYVE-207ENST00000452564 ZC3H13Q5T200 1668 aaKnown RBP11.72□□□□□ -0.53
PIKFYVE-207ENST00000452564 KIAA1107Q9UPP5 1409 aa11.72□□□□□ -0.53
PIKFYVE-207ENST00000452564 CERKQ8TCT0 537 aa11.72□□□□□ -0.53
PIKFYVE-207ENST00000452564 CNTLNQ9NXG0 1405 aa11.72□□□□□ -0.53
PIKFYVE-207ENST00000452564 ATP7AQ04656 1500 aa11.72□□□□□ -0.53
PIKFYVE-207ENST00000452564 CAMSAP1Q5T5Y3 1602 aa11.72□□□□□ -0.53
PIKFYVE-207ENST00000452564 VWDEQ8N2E2 1590 aa11.71□□□□□ -0.53
PIKFYVE-207ENST00000452564 GPATCH8Q9UKJ3 1502 aaKnown RBP11.71□□□□□ -0.54
PIKFYVE-207ENST00000452564 XIRP1Q702N8 1843 aaKnown RBP11.71□□□□□ -0.54
PIKFYVE-207ENST00000452564 PTPRKQ15262 1439 aa11.7□□□□□ -0.54
PIKFYVE-207ENST00000452564 SYCP2Q9BX26 1530 aa11.69□□□□□ -0.54
PIKFYVE-207ENST00000452564 MBD5Q9P267 1494 aa11.69□□□□□ -0.54
PIKFYVE-207ENST00000452564 MROH1Q8NDA8 1641 aa11.69□□□□□ -0.54
PIKFYVE-207ENST00000452564 MAST1Q9Y2H9 1570 aa11.69□□□□□ -0.54
PIKFYVE-207ENST00000452564 UHRF1BP1Q6BDS2 1440 aa11.69□□□□□ -0.54
PIKFYVE-207ENST00000452564 PLEKHD1A6NEE1 506 aa11.68□□□□□ -0.54
PIKFYVE-207ENST00000452564 CAMSAP2Q08AD1 1489 aa11.67□□□□□ -0.54
PIKFYVE-207ENST00000452564 P3H3Q8IVL6 736 aa11.67□□□□□ -0.54
PIKFYVE-207ENST00000452564 KDM5AP29375 1690 aaKnown RBP11.66□□□□□ -0.54
PIKFYVE-207ENST00000452564 EIF2AK4Q9P2K8 1649 aaKnown RBP11.66□□□□□ -0.54
PIKFYVE-207ENST00000452564 MED14O60244 1454 aa11.66□□□□□ -0.54
PIKFYVE-207ENST00000452564 ARHGEF5Q12774 1597 aa11.66□□□□□ -0.54
PIKFYVE-207ENST00000452564 SYNMO15061 1565 aa11.64□□□□□ -0.55
PIKFYVE-207ENST00000452564 KDM5DQ9BY66 1539 aa11.64□□□□□ -0.55
PIKFYVE-207ENST00000452564 RTEL1-TNFRSF6BF6WH68 1400 aa11.63□□□□□ -0.55
PIKFYVE-207ENST00000452564 CLIP1P30622 1438 aa11.63□□□□□ -0.55
PIKFYVE-207ENST00000452564 HSPA2P54652 639 aa11.63□□□□□ -0.55
PIKFYVE-207ENST00000452564 CROCC2H7BZ55 1655 aa11.62□□□□□ -0.55
PIKFYVE-207ENST00000452564 PLEKHH2Q8IVE3 1493 aa11.61□□□□□ -0.55
PIKFYVE-207ENST00000452564 EFCAB2Q5VUJ9 269 aa11.61□□□□□ -0.55
PIKFYVE-207ENST00000452564 ILDR2Q71H61 639 aa11.61□□□□□ -0.55
PIKFYVE-207ENST00000452564 A2ML1A8K2U0 1454 aa11.61□□□□□ -0.55
PIKFYVE-207ENST00000452564 CPS1P31327 1500 aa11.6□□□□□ -0.55
PIKFYVE-207ENST00000452564 UBR1Q8IWV7 1749 aa11.6□□□□□ -0.55
PIKFYVE-207ENST00000452564 EHBP1L1Q8N3D4 1523 aa11.6□□□□□ -0.55
PIKFYVE-207ENST00000452564 A2MP01023 1474 aa11.59□□□□□ -0.55
PIKFYVE-207ENST00000452564 MED1Q15648 1581 aaPredicted RBP11.59□□□□□ -0.55
PIKFYVE-207ENST00000452564 IQGAP1P46940 1657 aa11.59□□□□□ -0.55
PIKFYVE-207ENST00000452564 ARID3CA6NKF2 412 aa11.59□□□□□ -0.55
PIKFYVE-207ENST00000452564 PZPP20742 1482 aa11.58□□□□□ -0.55
PIKFYVE-207ENST00000452564 CEP162Q5TB80 1403 aa11.57□□□□□ -0.56
PIKFYVE-207ENST00000452564 AFAP1Q8N556 730 aa11.56□□□□□ -0.56
PIKFYVE-207ENST00000452564 ZMYM3Q14202 1370 aa11.55□□□□□ -0.56
PIKFYVE-207ENST00000452564 DMRT2Q9Y5R5 561 aa11.55□□□□□ -0.56
PIKFYVE-207ENST00000452564 SOCS7O14512 581 aa11.55□□□□□ -0.56
PIKFYVE-207ENST00000452564 CEBPAP49715 358 aaPredicted RBP11.53□□□□□ -0.56
PIKFYVE-207ENST00000452564 PPP6R1Q9UPN7 881 aa11.52□□□□□ -0.56
PIKFYVE-207ENST00000452564 PRDM15P57071 1507 aaPredicted RBP11.52□□□□□ -0.57
PIKFYVE-207ENST00000452564 SLIT1O75093 1534 aa11.52□□□□□ -0.57
PIKFYVE-207ENST00000452564 ARHGAP23Q9P227 1491 aa11.52□□□□□ -0.57
PIKFYVE-207ENST00000452564 ARID4BQ4LE39 1312 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms