RNA–Protein interactions for RNA: ENST00000450661.1

AC004980.1-202, humanhuman

TSL 1 (best)

Gene AC004980.1, Length 962 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004980.1-202ENST00000450661 PTPRMP28827 1452 aa39.09■■■■□ 3.85
AC004980.1-202ENST00000450661 CLIP1P30622 1438 aa39.08■■■■□ 3.85
AC004980.1-202ENST00000450661 CCDC18Q5T9S5 1454 aa39.08■■■■□ 3.85
AC004980.1-202ENST00000450661 ZFYVE16Q7Z3T8 1539 aa39.08■■■■□ 3.85
AC004980.1-202ENST00000450661 YEATS2Q9ULM3 1422 aa39.06■■■■□ 3.84
AC004980.1-202ENST00000450661 MADDQ8WXG6 1647 aa39.04■■■■□ 3.84
AC004980.1-202ENST00000450661 EFCAB2Q5VUJ9 269 aa39.04■■■■□ 3.84
AC004980.1-202ENST00000450661 FYCO1Q9BQS8 1478 aa39.01■■■■□ 3.84
AC004980.1-202ENST00000450661 SIGLEC1Q9BZZ2 1709 aa39■■■■□ 3.83
AC004980.1-202ENST00000450661 ARID4BQ4LE39 1312 aaPredicted RBP39■■■■□ 3.83
AC004980.1-202ENST00000450661 ARHGAP5Q13017 1502 aa38.97■■■■□ 3.83
AC004980.1-202ENST00000450661 CDC42BPBQ9Y5S2 1711 aa38.92■■■■□ 3.82
AC004980.1-202ENST00000450661 PREX2Q70Z35 1606 aa38.91■■■■□ 3.82
AC004980.1-202ENST00000450661 ZNF518AQ6AHZ1 1483 aa38.91■■■■□ 3.82
AC004980.1-202ENST00000450661 KDM5CP41229 1560 aa38.91■■■■□ 3.82
AC004980.1-202ENST00000450661 RIMS1Q86UR5 1692 aaKnown RBP38.87■■■■□ 3.81
AC004980.1-202ENST00000450661 ATP10AO60312 1499 aa38.85■■■■□ 3.81
AC004980.1-202ENST00000450661 C9orf84Q5VXU9 1444 aa38.81■■■■□ 3.8
AC004980.1-202ENST00000450661 ABCC1P33527 1531 aa38.79■■■■□ 3.8
AC004980.1-202ENST00000450661 CDC42BPAQ5VT25 1732 aa38.79■■■■□ 3.8
AC004980.1-202ENST00000450661 AFAP1Q8N556 730 aa38.77■■■■□ 3.8
AC004980.1-202ENST00000450661 ARHGEF12Q9NZN5 1544 aa38.75■■■■□ 3.79
AC004980.1-202ENST00000450661 ITSN2Q9NZM3 1697 aa38.73■■■■□ 3.79
AC004980.1-202ENST00000450661 LMTK3Q96Q04 1460 aa38.72■■■■□ 3.79
AC004980.1-202ENST00000450661 MLH3Q9UHC1 1453 aa38.72■■■■□ 3.79
AC004980.1-202ENST00000450661 DIP2CQ9Y2E4 1556 aa38.71■■■■□ 3.79
AC004980.1-202ENST00000450661 FER1L4A9Z1Z3 1794 aa38.71■■■■□ 3.79
AC004980.1-202ENST00000450661 REREQ9P2R6 1566 aa38.7■■■■□ 3.79
AC004980.1-202ENST00000450661 TRAPPC8Q9Y2L5 1435 aa38.7■■■■□ 3.79
AC004980.1-202ENST00000450661 ABCA6Q8N139 1617 aa38.66■■■■□ 3.78
AC004980.1-202ENST00000450661 GPATCH8Q9UKJ3 1502 aaKnown RBP38.65■■■■□ 3.78
AC004980.1-202ENST00000450661 MLECQ14165 292 aa38.65■■■■□ 3.78
AC004980.1-202ENST00000450661 CEP162Q5TB80 1403 aa38.62■■■■□ 3.77
AC004980.1-202ENST00000450661 SAMD9LQ8IVG5 1584 aa38.61■■■■□ 3.77
AC004980.1-202ENST00000450661 KIDINS220Q9ULH0 1771 aa38.57■■■■□ 3.76
AC004980.1-202ENST00000450661 ILDR1Q86SU0 546 aaPredicted RBP38.56■■■■□ 3.76
AC004980.1-202ENST00000450661 AGLP35573 1532 aa38.54■■■■□ 3.76
AC004980.1-202ENST00000450661 SYCP2Q9BX26 1530 aa38.53■■■■□ 3.76
AC004980.1-202ENST00000450661 MTUS2Q5JR59 1369 aa38.52■■■■□ 3.76
AC004980.1-202ENST00000450661 MYT1LQ9UL68 1186 aa38.51■■■■□ 3.76
AC004980.1-202ENST00000450661 EHBP1L1Q8N3D4 1523 aa38.49■■■■□ 3.75
AC004980.1-202ENST00000450661 KIAA1107Q9UPP5 1409 aa38.49■■■■□ 3.75
AC004980.1-202ENST00000450661 CCNB3Q8WWL7 1395 aa38.47■■■■□ 3.75
AC004980.1-202ENST00000450661 PLPPR3Q6T4P5 718 aa38.46■■■■□ 3.75
AC004980.1-202ENST00000450661 PLEKHH2Q8IVE3 1493 aa38.46■■■■□ 3.75
AC004980.1-202ENST00000450661 ZNF777Q9ULD5 760 aaPredicted RBP38.45■■■■□ 3.75
AC004980.1-202ENST00000450661 TIAM1Q13009 1591 aa38.44■■■■□ 3.74
AC004980.1-202ENST00000450661 CFDP1Q9UEE9 299 aaPredicted RBP38.43■■■■□ 3.74
AC004980.1-202ENST00000450661 HNRNPMP52272 730 aaKnown RBP eCLIP38.39■■■■□ 3.747e-8■■■■■ 43.9
AC004980.1-202ENST00000450661 INO80Q9ULG1 1556 aaPredicted RBP38.38■■■■□ 3.73
AC004980.1-202ENST00000450661 PREX1Q8TCU6 1659 aa38.38■■■■□ 3.73
AC004980.1-202ENST00000450661 HSPA2P54652 639 aa38.37■■■■□ 3.73
AC004980.1-202ENST00000450661 SPAG9O60271 1321 aaKnown RBP38.36■■■■□ 3.73
AC004980.1-202ENST00000450661 ATP7AQ04656 1500 aa38.35■■■■□ 3.73
AC004980.1-202ENST00000450661 CEBPAP49715 358 aaPredicted RBP38.35■■■■□ 3.73
AC004980.1-202ENST00000450661 C3P01024 1663 aa38.3■■■■□ 3.72
AC004980.1-202ENST00000450661 PLXNC1O60486 1568 aa38.29■■■■□ 3.72
AC004980.1-202ENST00000450661 MBD5Q9P267 1494 aa38.28■■■■□ 3.72
AC004980.1-202ENST00000450661 CNTLNQ9NXG0 1405 aa38.25■■■■□ 3.71
AC004980.1-202ENST00000450661 ZNF644Q9H582 1327 aaPredicted RBP38.24■■■■□ 3.71
AC004980.1-202ENST00000450661 SUPT6HQ7KZ85 1726 aaKnown RBP38.24■■■■□ 3.71
AC004980.1-202ENST00000450661 NCOA2Q15596 1464 aa38.23■■■■□ 3.71
AC004980.1-202ENST00000450661 VPS8Q8N3P4 1428 aa38.23■■■■□ 3.71
AC004980.1-202ENST00000450661 LOC105371045A0A1W2PR82 267 aa38.23■■■■□ 3.71
AC004980.1-202ENST00000450661 SETD1BQ9UPS6 1966 aaKnown RBP38.22■■■■□ 3.71
AC004980.1-202ENST00000450661 A2MP01023 1474 aa38.21■■■■□ 3.71
AC004980.1-202ENST00000450661 UHRF1BP1Q6BDS2 1440 aa38.21■■■■□ 3.71
AC004980.1-202ENST00000450661 MROH2AA6NES4 1674 aa38.18■■■■□ 3.7
AC004980.1-202ENST00000450661 ESF1Q9H501 851 aaKnown RBP38.17■■■■□ 3.7
AC004980.1-202ENST00000450661 ADGBQ8N7X0 1667 aa38.16■■■■□ 3.7
AC004980.1-202ENST00000450661 RTEL1-TNFRSF6BF6WH68 1400 aa38.14■■■■□ 3.7
AC004980.1-202ENST00000450661 FBXO41Q8TF61 875 aa38.12■■■■□ 3.69
AC004980.1-202ENST00000450661 CAMSAP2Q08AD1 1489 aa38.1■■■■□ 3.69
AC004980.1-202ENST00000450661 LRRC9Q6ZRR7 1453 aa38.1■■■■□ 3.69
AC004980.1-202ENST00000450661 STRCQ7RTU9 1775 aa38.08■■■■□ 3.69
AC004980.1-202ENST00000450661 MAP3K1Q13233 1512 aa38.07■■■■□ 3.69
AC004980.1-202ENST00000450661 CCDC141Q6ZP82 1450 aa38.07■■■■□ 3.68
AC004980.1-202ENST00000450661 NPATQ14207 1427 aa38.06■■■■□ 3.68
AC004980.1-202ENST00000450661 ZMYM3Q14202 1370 aa38.04■■■■□ 3.68
AC004980.1-202ENST00000450661 CLTCQ00610 1675 aaKnown RBP38.03■■■■□ 3.68
AC004980.1-202ENST00000450661 ARHGEF5Q12774 1597 aa38■■■■□ 3.67
AC004980.1-202ENST00000450661 DHX29Q7Z478 1369 aaKnown RBP37.99■■■■□ 3.67
AC004980.1-202ENST00000450661 RSPH4AQ5TD94 716 aa37.98■■■■□ 3.67
AC004980.1-202ENST00000450661 PPP6R1Q9UPN7 881 aa37.97■■■■□ 3.67
AC004980.1-202ENST00000450661 GGT6Q6P531 493 aa37.94■■■■□ 3.66
AC004980.1-202ENST00000450661 DMRT2Q9Y5R5 561 aa37.92■■■■□ 3.66
AC004980.1-202ENST00000450661 PTPRKQ15262 1439 aa37.91■■■■□ 3.66
AC004980.1-202ENST00000450661 KANK4Q5T7N3 995 aaPredicted RBP37.91■■■■□ 3.66
AC004980.1-202ENST00000450661 PTPRTO14522 1441 aa37.88■■■■□ 3.66
AC004980.1-202ENST00000450661 NCOA1Q15788 1441 aa37.87■■■■□ 3.65
AC004980.1-202ENST00000450661 ZNF142P52746 1687 aaPredicted RBP37.86■■■■□ 3.65
AC004980.1-202ENST00000450661 CERKQ8TCT0 537 aa37.86■■■■□ 3.65
AC004980.1-202ENST00000450661 MYO3AQ8NEV4 1616 aa37.86■■■■□ 3.65
AC004980.1-202ENST00000450661 FAM135AQ9P2D6 1515 aa37.84■■■■□ 3.65
AC004980.1-202ENST00000450661 MIA2Q96PC5 1412 aa37.84■■■■□ 3.65
AC004980.1-202ENST00000450661 MYOM3Q5VTT5 1437 aa37.83■■■■□ 3.65
AC004980.1-202ENST00000450661 MAST1Q9Y2H9 1570 aa37.83■■■■□ 3.65
AC004980.1-202ENST00000450661 CAMSAP1Q5T5Y3 1602 aa37.8■■■■□ 3.64
AC004980.1-202ENST00000450661 KIF3BO15066 747 aa37.78■■■■□ 3.64
AC004980.1-202ENST00000450661 KDM5DQ9BY66 1539 aa37.77■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms