RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 RIMBP3BA6NNM3 1639 aa14.33□□□□□ -0.12
RFC4-210ENST00000449502 RIMBP3Q9UFD9 1639 aa14.33□□□□□ -0.12
RFC4-210ENST00000449502 ITSN2Q9NZM3 1697 aa14.33□□□□□ -0.12
RFC4-210ENST00000449502 CAMSAP2Q08AD1 1489 aa14.32□□□□□ -0.12
RFC4-210ENST00000449502 ARHGAP5Q13017 1502 aa14.31□□□□□ -0.12
RFC4-210ENST00000449502 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.31□□□□□ -0.12
RFC4-210ENST00000449502 RRP7BPQ9NSQ0 103 aa14.31□□□□□ -0.12
RFC4-210ENST00000449502 RAB3GAP2Q9H2M9 1393 aa14.31□□□□□ -0.12
RFC4-210ENST00000449502 PLCH2O75038 1416 aa14.31□□□□□ -0.12
RFC4-210ENST00000449502 DAPK1P53355 1430 aa14.31□□□□□ -0.12
RFC4-210ENST00000449502 HNRNPMP52272 730 aaKnown RBP eCLIP14.3□□□□□ -0.12
RFC4-210ENST00000449502 ABCC5O15440 1437 aa14.3□□□□□ -0.12
RFC4-210ENST00000449502 PLEKHH2Q8IVE3 1493 aa14.3□□□□□ -0.12
RFC4-210ENST00000449502 PTPRKQ15262 1439 aa14.29□□□□□ -0.12
RFC4-210ENST00000449502 ACIN1Q9UKV3 1341 aaKnown RBP14.28□□□□□ -0.12
RFC4-210ENST00000449502 HFM1A2PYH4 1435 aa14.27□□□□□ -0.12
RFC4-210ENST00000449502 ROCK1Q13464 1354 aa14.27□□□□□ -0.12
RFC4-210ENST00000449502 ANKRD30AQ9BXX3 1397 aa14.26□□□□□ -0.13
RFC4-210ENST00000449502 TTC37Q6PGP7 1564 aa14.26□□□□□ -0.13
RFC4-210ENST00000449502 KIAA1107Q9UPP5 1409 aa14.25□□□□□ -0.13
RFC4-210ENST00000449502 AKNAQ7Z591 1439 aa14.24□□□□□ -0.13
RFC4-210ENST00000449502 CD109Q6YHK3 1445 aa14.24□□□□□ -0.13
RFC4-210ENST00000449502 TRIM52Q96A61 297 aa14.23□□□□□ -0.13
RFC4-210ENST00000449502 CCDC141Q6ZP82 1450 aa14.23□□□□□ -0.13
RFC4-210ENST00000449502 NAIPQ13075 1403 aa14.23□□□□□ -0.13
RFC4-210ENST00000449502 PREX2Q70Z35 1606 aa14.23□□□□□ -0.13
RFC4-210ENST00000449502 C9orf84Q5VXU9 1444 aa14.22□□□□□ -0.13
RFC4-210ENST00000449502 DNMT1P26358 1616 aaKnown RBP14.22□□□□□ -0.13
RFC4-210ENST00000449502 MAPKBP1O60336 1514 aa14.21□□□□□ -0.13
RFC4-210ENST00000449502 ARAP3Q8WWN8 1544 aa14.21□□□□□ -0.13
RFC4-210ENST00000449502 CLSPNQ9HAW4 1339 aa14.21□□□□□ -0.13
RFC4-210ENST00000449502 FAM69CQ0P6D2 419 aa14.21□□□□□ -0.13
RFC4-210ENST00000449502 MYT1LQ9UL68 1186 aa14.21□□□□□ -0.13
RFC4-210ENST00000449502 CDC42BPAQ5VT25 1732 aa14.21□□□□□ -0.14
RFC4-210ENST00000449502 DHX57Q6P158 1386 aaKnown RBP14.21□□□□□ -0.14
RFC4-210ENST00000449502 FANCAO15360 1455 aa14.2□□□□□ -0.14
RFC4-210ENST00000449502 SHANK2Q9UPX8 1470 aa14.2□□□□□ -0.14
RFC4-210ENST00000449502 MBD5Q9P267 1494 aa14.19□□□□□ -0.14
RFC4-210ENST00000449502 MYO5CQ9NQX4 1742 aa14.18□□□□□ -0.14
RFC4-210ENST00000449502 SAMD9LQ8IVG5 1584 aa14.18□□□□□ -0.14
RFC4-210ENST00000449502 SYCP2Q9BX26 1530 aa14.18□□□□□ -0.14
RFC4-210ENST00000449502 ABCA9Q8IUA7 1624 aa14.18□□□□□ -0.14
RFC4-210ENST00000449502 ARHGEF5Q12774 1597 aa14.17□□□□□ -0.14
RFC4-210ENST00000449502 SPAG9O60271 1321 aaKnown RBP14.17□□□□□ -0.14
RFC4-210ENST00000449502 NCOA1Q15788 1441 aa14.17□□□□□ -0.14
RFC4-210ENST00000449502 ADGRL2O95490 1459 aa14.16□□□□□ -0.14
RFC4-210ENST00000449502 SCAPERQ9BY12 1400 aa14.15□□□□□ -0.14
RFC4-210ENST00000449502 ADGRL1O94910 1474 aa14.15□□□□□ -0.14
RFC4-210ENST00000449502 KIF15Q9NS87 1388 aa14.15□□□□□ -0.14
RFC4-210ENST00000449502 AFAP1Q8N556 730 aa14.14□□□□□ -0.15
RFC4-210ENST00000449502 CDC42BPBQ9Y5S2 1711 aa14.14□□□□□ -0.15
RFC4-210ENST00000449502 ABCC1P33527 1531 aa14.14□□□□□ -0.15
RFC4-210ENST00000449502 ANKRD50Q9ULJ7 1429 aa14.14□□□□□ -0.15
RFC4-210ENST00000449502 TRAPPC8Q9Y2L5 1435 aa14.13□□□□□ -0.15
RFC4-210ENST00000449502 ARHGEF12Q9NZN5 1544 aa14.11□□□□□ -0.15
RFC4-210ENST00000449502 GLI2P10070 1586 aa14.1□□□□□ -0.15
RFC4-210ENST00000449502 SLC4A1APQ9BWU0 796 aaKnown RBP14.1□□□□□ -0.15
RFC4-210ENST00000449502 NEO1Q92859 1461 aa14.1□□□□□ -0.15
RFC4-210ENST00000449502 RTEL1-TNFRSF6BF6WH68 1400 aa14.09□□□□□ -0.15
RFC4-210ENST00000449502 MPHOSPH9Q99550 1183 aa14.09□□□□□ -0.15
RFC4-210ENST00000449502 CFAP74Q9C0B2 1584 aa14.09□□□□□ -0.15
RFC4-210ENST00000449502 DNAJC5Q9H3Z4 198 aa14.08□□□□□ -0.16
RFC4-210ENST00000449502 GCC2Q8IWJ2 1684 aa14.07□□□□□ -0.16
RFC4-210ENST00000449502 NEUROD1Q13562 356 aa14.07□□□□□ -0.16
RFC4-210ENST00000449502 MAST1Q9Y2H9 1570 aa14.07□□□□□ -0.16
RFC4-210ENST00000449502 CROCC2H7BZ55 1655 aa14.07□□□□□ -0.16
RFC4-210ENST00000449502 DENND4BO75064 1496 aaPredicted RBP14.06□□□□□ -0.16
RFC4-210ENST00000449502 ZNF518AQ6AHZ1 1483 aa14.06□□□□□ -0.16
RFC4-210ENST00000449502 TEX14Q8IWB6 1497 aa14.06□□□□□ -0.16
RFC4-210ENST00000449502 ADGBQ8N7X0 1667 aa14.06□□□□□ -0.16
RFC4-210ENST00000449502 NUP155O75694 1391 aa14.06□□□□□ -0.16
RFC4-210ENST00000449502 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.05□□□□□ -0.169e-7■■□□□ 11.9
RFC4-210ENST00000449502 POGZQ7Z3K3 1410 aa14.04□□□□□ -0.16
RFC4-210ENST00000449502 DUOX2Q9NRD8 1548 aa14.04□□□□□ -0.16
RFC4-210ENST00000449502 DIP2BQ9P265 1576 aa14.04□□□□□ -0.16
RFC4-210ENST00000449502 RAPGEF3O95398 923 aa14.03□□□□□ -0.16
RFC4-210ENST00000449502 ERBINQ96RT1 1412 aa14.03□□□□□ -0.16
RFC4-210ENST00000449502 TRHP20396 242 aaPredicted RBP14.02□□□□□ -0.17
RFC4-210ENST00000449502 SIN3AQ96ST3 1273 aa14.01□□□□□ -0.17
RFC4-210ENST00000449502 TIMELESSQ9UNS1 1208 aa14.01□□□□□ -0.17
RFC4-210ENST00000449502 KDM6BO15054 1643 aa14.01□□□□□ -0.17
RFC4-210ENST00000449502 MAP3K4Q9Y6R4 1608 aa14.01□□□□□ -0.17
RFC4-210ENST00000449502 PLXNC1O60486 1568 aa14□□□□□ -0.17
RFC4-210ENST00000449502 PKD2Q13563 968 aa14□□□□□ -0.17
RFC4-210ENST00000449502 ATP7AQ04656 1500 aa14□□□□□ -0.17
RFC4-210ENST00000449502 DHX29Q7Z478 1369 aaKnown RBP13.99□□□□□ -0.17
RFC4-210ENST00000449502 ZFYVE16Q7Z3T8 1539 aa13.99□□□□□ -0.17
RFC4-210ENST00000449502 KIF3BO15066 747 aa13.98□□□□□ -0.17
RFC4-210ENST00000449502 MLH3Q9UHC1 1453 aa13.98□□□□□ -0.17
RFC4-210ENST00000449502 KANK1Q14678 1352 aa13.97□□□□□ -0.17
RFC4-210ENST00000449502 TONSLQ96HA7 1378 aa13.97□□□□□ -0.17
RFC4-210ENST00000449502 FOXD1Q16676 465 aa13.97□□□□□ -0.17
RFC4-210ENST00000449502 A2MP01023 1474 aa13.94□□□□□ -0.18
RFC4-210ENST00000449502 PZPP20742 1482 aa13.94□□□□□ -0.18
RFC4-210ENST00000449502 INO80Q9ULG1 1556 aaPredicted RBP13.93□□□□□ -0.18
RFC4-210ENST00000449502 KDM5CP41229 1560 aa13.92□□□□□ -0.18
RFC4-210ENST00000449502 KDM5DQ9BY66 1539 aa13.92□□□□□ -0.18
RFC4-210ENST00000449502 ANKRD30BQ9BXX2 1392 aa13.92□□□□□ -0.18
RFC4-210ENST00000449502 HECW2Q9P2P5 1572 aa13.91□□□□□ -0.18
RFC4-210ENST00000449502 GGT6Q6P531 493 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms