RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
CHRD-205ENST00000448472 NCOA1Q15788 1441 aa21.23■□□□□ 0.99
CHRD-205ENST00000448472 LAS1LQ9Y4W2 734 aaKnown RBP21.22■□□□□ 0.99
CHRD-205ENST00000448472 IPO9Q96P70 1041 aaKnown RBP21.22■□□□□ 0.99
CHRD-205ENST00000448472 CARD11Q9BXL7 1154 aa21.22■□□□□ 0.99
CHRD-205ENST00000448472 SUPT6HQ7KZ85 1726 aaKnown RBP21.21■□□□□ 0.99
CHRD-205ENST00000448472 GAPVD1Q14C86 1478 aa21.2■□□□□ 0.98
CHRD-205ENST00000448472 PKD2Q13563 968 aa21.2■□□□□ 0.98
CHRD-205ENST00000448472 CFDP1Q9UEE9 299 aaPredicted RBP21.19■□□□□ 0.98
CHRD-205ENST00000448472 DNMBPQ6XZF7 1577 aa21.19■□□□□ 0.98
CHRD-205ENST00000448472 EHBP1L1Q8N3D4 1523 aa21.18■□□□□ 0.98
CHRD-205ENST00000448472 RTN4Q9NQC3 1192 aaKnown RBP21.17■□□□□ 0.98
CHRD-205ENST00000448472 USP47Q96K76 1375 aa21.15■□□□□ 0.98
CHRD-205ENST00000448472 KDM5BQ9UGL1 1544 aa21.15■□□□□ 0.98
CHRD-205ENST00000448472 FBLN2P98095 1184 aa21.15■□□□□ 0.98
CHRD-205ENST00000448472 GRIN2BQ13224 1484 aa21.15■□□□□ 0.98
CHRD-205ENST00000448472 CDK13Q14004 1512 aaKnown RBP21.14■□□□□ 0.97
CHRD-205ENST00000448472 ANKRD30BQ9BXX2 1392 aa21.14■□□□□ 0.97
CHRD-205ENST00000448472 EXOC6Q8TAG9 804 aa21.14■□□□□ 0.97
CHRD-205ENST00000448472 KDM6BO15054 1643 aa21.12■□□□□ 0.97
CHRD-205ENST00000448472 CUL7Q14999 1698 aa21.11■□□□□ 0.97
CHRD-205ENST00000448472 CTTNBP2Q8WZ74 1663 aa21.11■□□□□ 0.97
CHRD-205ENST00000448472 DCAF11Q8TEB1 546 aa21.1■□□□□ 0.97
CHRD-205ENST00000448472 UGGT2Q9NYU1 1516 aa21.1■□□□□ 0.97
CHRD-205ENST00000448472 SMG6Q86US8 1419 aaKnown RBP21.09■□□□□ 0.97
CHRD-205ENST00000448472 ST20-MTHFSA0A0A6YYL1 179 aa21.09■□□□□ 0.97
CHRD-205ENST00000448472 CC2D2AQ9P2K1 1620 aa21.09■□□□□ 0.97
CHRD-205ENST00000448472 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
CHRD-205ENST00000448472 NEFMP07197 916 aa21.09■□□□□ 0.97
CHRD-205ENST00000448472 RGL3Q3MIN7 710 aa21.09■□□□□ 0.97
CHRD-205ENST00000448472 MAGI3Q5TCQ9 1506 aa21.09■□□□□ 0.97
CHRD-205ENST00000448472 DENND4BO75064 1496 aaPredicted RBP21.09■□□□□ 0.97
CHRD-205ENST00000448472 PNISRQ8TF01 805 aaKnown RBP21.08■□□□□ 0.97
CHRD-205ENST00000448472 DAXXQ9UER7 740 aaPredicted RBP21.08■□□□□ 0.96
CHRD-205ENST00000448472 RCAN3Q9UKA8 241 aa21.07■□□□□ 0.96
CHRD-205ENST00000448472 RPRD2Q5VT52 1461 aaKnown RBP21.06■□□□□ 0.96
CHRD-205ENST00000448472 EPRSP07814 1512 aaKnown RBP21.05■□□□□ 0.96
CHRD-205ENST00000448472 PLIN1O60240 522 aa21.05■□□□□ 0.96
CHRD-205ENST00000448472 CC2D1BQ5T0F9 858 aaKnown RBP21.04■□□□□ 0.96
CHRD-205ENST00000448472 RRP1P56182 461 aaKnown RBP21.03■□□□□ 0.96
CHRD-205ENST00000448472 DAPK1P53355 1430 aa21.03■□□□□ 0.96
CHRD-205ENST00000448472 URB2Q14146 1524 aaKnown RBP21.02■□□□□ 0.96
CHRD-205ENST00000448472 MIA2Q96PC5 1412 aa21.02■□□□□ 0.95
CHRD-205ENST00000448472 SKAP1Q86WV1 359 aa21.01■□□□□ 0.95
CHRD-205ENST00000448472 PDE4AP27815 886 aa21■□□□□ 0.95
CHRD-205ENST00000448472 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.99■□□□□ 0.952e-7■□□□□ 11.1
CHRD-205ENST00000448472 NUP155O75694 1391 aa20.99■□□□□ 0.95
CHRD-205ENST00000448472 ABCC5O15440 1437 aa20.99■□□□□ 0.95
CHRD-205ENST00000448472 CDCA7LQ96GN5 454 aa20.98■□□□□ 0.95
CHRD-205ENST00000448472 TSPY4P0CV99 314 aa20.98■□□□□ 0.95
CHRD-205ENST00000448472 TSPY10P0CW01 314 aa20.98■□□□□ 0.95
CHRD-205ENST00000448472 HECW1Q76N89 1606 aa20.97■□□□□ 0.95
CHRD-205ENST00000448472 DHX29Q7Z478 1369 aaKnown RBP20.97■□□□□ 0.95
CHRD-205ENST00000448472 PDS5BQ9NTI5 1447 aa20.97■□□□□ 0.95
CHRD-205ENST00000448472 THOC2Q8NI27 1593 aaKnown RBP20.96■□□□□ 0.95
CHRD-205ENST00000448472 TCERG1O14776 1098 aaKnown RBP20.96■□□□□ 0.95
CHRD-205ENST00000448472 TCOF1Q13428 1488 aaKnown RBP20.96■□□□□ 0.95
CHRD-205ENST00000448472 MYBBP1AQ9BQG0 1328 aaKnown RBP20.96■□□□□ 0.95
CHRD-205ENST00000448472 KIF15Q9NS87 1388 aa20.95■□□□□ 0.94
CHRD-205ENST00000448472 LRRIQ1Q96JM4 1722 aa20.95■□□□□ 0.94
CHRD-205ENST00000448472 IL27Q8NEV9 243 aa20.95■□□□□ 0.94
CHRD-205ENST00000448472 SPATA31E1Q6ZUB1 1445 aa20.94■□□□□ 0.94
CHRD-205ENST00000448472 SAMD9Q5K651 1589 aa20.94■□□□□ 0.94
CHRD-205ENST00000448472 TEX14Q8IWB6 1497 aa20.94■□□□□ 0.94
CHRD-205ENST00000448472 RALBP1Q15311 655 aa20.93■□□□□ 0.94
CHRD-205ENST00000448472 SLC4A3P48751 1232 aa20.92■□□□□ 0.94
CHRD-205ENST00000448472 ROCK2O75116 1388 aaKnown RBP20.91■□□□□ 0.94
CHRD-205ENST00000448472 ROCK1Q13464 1354 aa20.9■□□□□ 0.94
CHRD-205ENST00000448472 NLRP13Q86W25 1043 aa20.9■□□□□ 0.94
CHRD-205ENST00000448472 PRG4Q92954 1404 aaPredicted RBP20.89■□□□□ 0.93
CHRD-205ENST00000448472 ANKRD30AQ9BXX3 1397 aa20.89■□□□□ 0.93
CHRD-205ENST00000448472 GCC2Q8IWJ2 1684 aa20.88■□□□□ 0.93
CHRD-205ENST00000448472 PLEKHD1A6NEE1 506 aa20.87■□□□□ 0.93
CHRD-205ENST00000448472 CRBNQ96SW2 442 aa20.87■□□□□ 0.93
CHRD-205ENST00000448472 ANO8Q9HCE9 1232 aaPredicted RBP20.87■□□□□ 0.93
CHRD-205ENST00000448472 KTN1Q86UP2 1357 aaKnown RBP20.87■□□□□ 0.93
CHRD-205ENST00000448472 KIAA1107Q9UPP5 1409 aa20.87■□□□□ 0.93
CHRD-205ENST00000448472 CHMP7Q8WUX9 453 aaPredicted RBP20.87■□□□□ 0.93
CHRD-205ENST00000448472 RNF123Q5XPI4 1314 aa20.87■□□□□ 0.93
CHRD-205ENST00000448472 HNRNPMP52272 730 aaKnown RBP eCLIP20.85■□□□□ 0.93
CHRD-205ENST00000448472 ARHGEF11O15085 1522 aa20.85■□□□□ 0.93
CHRD-205ENST00000448472 PPM1GO15355 546 aaPredicted RBP20.84■□□□□ 0.93
CHRD-205ENST00000448472 LAMC3Q9Y6N6 1575 aa20.84■□□□□ 0.93
CHRD-205ENST00000448472 RGS3P49796 1198 aa20.84■□□□□ 0.93
CHRD-205ENST00000448472 BACH2Q9BYV9 841 aa20.84■□□□□ 0.93
CHRD-205ENST00000448472 IQGAP2Q13576 1575 aa20.83■□□□□ 0.93
CHRD-205ENST00000448472 BRD4O60885 1362 aaPredicted RBP20.83■□□□□ 0.92
CHRD-205ENST00000448472 ARID4BQ4LE39 1312 aaPredicted RBP20.82■□□□□ 0.92
CHRD-205ENST00000448472 ANKRD50Q9ULJ7 1429 aa20.82■□□□□ 0.92
CHRD-205ENST00000448472 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.82■□□□□ 0.92
CHRD-205ENST00000448472 NBPF1Q3BBV0 1214 aa20.81■□□□□ 0.92
CHRD-205ENST00000448472 WDR43Q15061 677 aaKnown RBP eCLIP20.79■□□□□ 0.92
CHRD-205ENST00000448472 PZPP20742 1482 aa20.79■□□□□ 0.92
CHRD-205ENST00000448472 DDRGK1Q96HY6 314 aa20.79■□□□□ 0.92
CHRD-205ENST00000448472 PANK3Q9H999 370 aa20.79■□□□□ 0.92
CHRD-205ENST00000448472 PDE3BQ13370 1112 aa20.78■□□□□ 0.92
CHRD-205ENST00000448472 ABCA5Q8WWZ7 1642 aa20.77■□□□□ 0.92
CHRD-205ENST00000448472 C20orf194Q5TEA3 1177 aa20.75■□□□□ 0.91
CHRD-205ENST00000448472 CAMSAP2Q08AD1 1489 aa20.74■□□□□ 0.91
CHRD-205ENST00000448472 MS4A1P11836 297 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms