RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 FANCD2Q9BXW9 1451 aa23.15■■□□□ 1.3
ATG9A-215ENST00000446716 MPHOSPH9Q99550 1183 aa23.13■■□□□ 1.29
ATG9A-215ENST00000446716 CASC1Q6TDU7 716 aa23.1■■□□□ 1.29
ATG9A-215ENST00000446716 CHMP4BQ9H444 224 aaKnown RBP23.1■■□□□ 1.29
ATG9A-215ENST00000446716 OS9Q13438 667 aaPredicted RBP23.1■■□□□ 1.29
ATG9A-215ENST00000446716 CSB-PGBD3P0DP91 1061 aa23.09■■□□□ 1.29
ATG9A-215ENST00000446716 RTF1Q92541 710 aaKnown RBP23.07■■□□□ 1.28
ATG9A-215ENST00000446716 CCDC18Q5T9S5 1454 aa23.07■■□□□ 1.28
ATG9A-215ENST00000446716 PTPRGP23470 1445 aa23.07■■□□□ 1.28
ATG9A-215ENST00000446716 MS4A1P11836 297 aa23.07■■□□□ 1.28
ATG9A-215ENST00000446716 HSPA5P11021 654 aaKnown RBP23.06■■□□□ 1.28
ATG9A-215ENST00000446716 BECN1Q14457 450 aa23.05■■□□□ 1.28
ATG9A-215ENST00000446716 SUPT16HQ9Y5B9 1047 aaKnown RBP23.05■■□□□ 1.28
ATG9A-215ENST00000446716 ROCK2O75116 1388 aaKnown RBP23.05■■□□□ 1.28
ATG9A-215ENST00000446716 NUTM2DQ5VT03 806 aaPredicted RBP23.02■■□□□ 1.28
ATG9A-215ENST00000446716 GOLGA2Q08379 1002 aa23.02■■□□□ 1.28
ATG9A-215ENST00000446716 SMARCA4P51532 1647 aa23.01■■□□□ 1.27
ATG9A-215ENST00000446716 CDK11BP21127 795 aaKnown RBP23■■□□□ 1.27
ATG9A-215ENST00000446716 EIF5BO60841 1220 aaKnown RBP23■■□□□ 1.27
ATG9A-215ENST00000446716 NCLP19338 710 aaKnown RBP23■■□□□ 1.27
ATG9A-215ENST00000446716 RAB3GAP2Q9H2M9 1393 aa22.99■■□□□ 1.27
ATG9A-215ENST00000446716 CCDC9Q9Y3X0 531 aaKnown RBP22.98■■□□□ 1.27
ATG9A-215ENST00000446716 NBR1Q14596 966 aa22.96■■□□□ 1.27
ATG9A-215ENST00000446716 NGDNQ8NEJ9 315 aaKnown RBP22.96■■□□□ 1.27
ATG9A-215ENST00000446716 EIF3AQ14152 1382 aaKnown RBP22.96■■□□□ 1.27
ATG9A-215ENST00000446716 KTN1Q86UP2 1357 aaKnown RBP22.96■■□□□ 1.27
ATG9A-215ENST00000446716 U2AF1L5P0DN76 240 aaPredicted RBP22.95■■□□□ 1.26
ATG9A-215ENST00000446716 U2AF1Q01081 240 aaKnown RBP eCLIP22.95■■□□□ 1.263e-6■□□□□ 11.1
ATG9A-215ENST00000446716 DDRGK1Q96HY6 314 aa22.95■■□□□ 1.26
ATG9A-215ENST00000446716 RGS3P49796 1198 aa22.94■■□□□ 1.26
ATG9A-215ENST00000446716 TERF2IPQ9NYB0 399 aa22.94■■□□□ 1.26
ATG9A-215ENST00000446716 GOLGA6L22H0YM25 854 aa22.91■■□□□ 1.26
ATG9A-215ENST00000446716 ZNF330Q9Y3S2 320 aaPredicted RBP22.9■■□□□ 1.26
ATG9A-215ENST00000446716 NUTM2FA1L443 756 aa22.89■■□□□ 1.25
ATG9A-215ENST00000446716 KCNJ4P48050 445 aa22.89■■□□□ 1.25
ATG9A-215ENST00000446716 FGD1P98174 961 aa22.89■■□□□ 1.25
ATG9A-215ENST00000446716 L3MBTL2Q969R5 705 aa22.86■■□□□ 1.25
ATG9A-215ENST00000446716 ZRSR1Q15695 479 aaKnown RBP22.86■■□□□ 1.25
ATG9A-215ENST00000446716 CALD1Q05682 793 aaKnown RBP22.85■■□□□ 1.25
ATG9A-215ENST00000446716 FAM69CQ0P6D2 419 aa22.85■■□□□ 1.25
ATG9A-215ENST00000446716 GAPVD1Q14C86 1478 aa22.85■■□□□ 1.25
ATG9A-215ENST00000446716 TAOK2Q9UL54 1235 aa22.85■■□□□ 1.25
ATG9A-215ENST00000446716 TRAK1Q9UPV9 953 aa22.84■■□□□ 1.25
ATG9A-215ENST00000446716 PPP4R2Q9NY27 417 aa22.81■■□□□ 1.24
ATG9A-215ENST00000446716 RALBP1Q15311 655 aa22.8■■□□□ 1.24
ATG9A-215ENST00000446716 AMPHP49418 695 aa22.8■■□□□ 1.24
ATG9A-215ENST00000446716 FGD5Q6ZNL6 1462 aa22.8■■□□□ 1.24
ATG9A-215ENST00000446716 IPO8O15397 1037 aaKnown RBP22.79■■□□□ 1.24
ATG9A-215ENST00000446716 NAP1L2Q9ULW6 460 aaPredicted RBP22.78■■□□□ 1.24
ATG9A-215ENST00000446716 CHMP4AQ9BY43 222 aa22.78■■□□□ 1.24
ATG9A-215ENST00000446716 CCER2I3L3R5 266 aa22.78■■□□□ 1.24
ATG9A-215ENST00000446716 VGFO15240 615 aaPredicted RBP22.78■■□□□ 1.24
ATG9A-215ENST00000446716 TPRNQ4KMQ1 711 aa22.77■■□□□ 1.24
ATG9A-215ENST00000446716 TULP1O00294 542 aaPredicted RBP22.77■■□□□ 1.24
ATG9A-215ENST00000446716 CCDC144AA2RUR9 1427 aa22.77■■□□□ 1.23
ATG9A-215ENST00000446716 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.76■■□□□ 1.23
ATG9A-215ENST00000446716 RAD54L2Q9Y4B4 1467 aa22.76■■□□□ 1.23
ATG9A-215ENST00000446716 LTV1Q96GA3 475 aaPredicted RBP22.76■■□□□ 1.23
ATG9A-215ENST00000446716 ANP32EQ9BTT0 268 aa22.74■■□□□ 1.23
ATG9A-215ENST00000446716 STK31Q9BXU1 1019 aa22.73■■□□□ 1.23
ATG9A-215ENST00000446716 RUSC2Q8N2Y8 1516 aa22.73■■□□□ 1.23
ATG9A-215ENST00000446716 IGF1RP08069 1367 aa22.72■■□□□ 1.23
ATG9A-215ENST00000446716 NCAPD3P42695 1498 aa22.71■■□□□ 1.23
ATG9A-215ENST00000446716 UACAQ9BZF9 1416 aa22.7■■□□□ 1.23
ATG9A-215ENST00000446716 AQRO60306 1485 aaKnown RBP eCLIP22.7■■□□□ 1.229e-7■■■■■ 28.7
ATG9A-215ENST00000446716 APBB1O00213 710 aa22.7■■□□□ 1.22
ATG9A-215ENST00000446716 TMX4Q9H1E5 349 aaPredicted RBP22.7■■□□□ 1.22
ATG9A-215ENST00000446716 AEBP2Q6ZN18 517 aaPredicted RBP22.69■■□□□ 1.22
ATG9A-215ENST00000446716 ISY1Q9ULR0 285 aaKnown RBP22.67■■□□□ 1.22
ATG9A-215ENST00000446716 B4GALNT3Q6L9W6 998 aa22.67■■□□□ 1.22
ATG9A-215ENST00000446716 HSP90AB1P08238 724 aaKnown RBP22.65■■□□□ 1.22
ATG9A-215ENST00000446716 MCCP23508 829 aa22.63■■□□□ 1.21
ATG9A-215ENST00000446716 ITPRIPQ8IWB1 547 aa22.63■■□□□ 1.21
ATG9A-215ENST00000446716 LMOD3Q0VAK6 560 aa22.62■■□□□ 1.21
ATG9A-215ENST00000446716 ST20-MTHFSA0A0A6YYL1 179 aa22.62■■□□□ 1.21
ATG9A-215ENST00000446716 NLRP13Q86W25 1043 aa22.61■■□□□ 1.21
ATG9A-215ENST00000446716 CHMP3Q9Y3E7 222 aa22.61■■□□□ 1.21
ATG9A-215ENST00000446716 MINK1Q8N4C8 1332 aaPredicted RBP22.61■■□□□ 1.21
ATG9A-215ENST00000446716 EVC2Q86UK5 1308 aa22.6■■□□□ 1.21
ATG9A-215ENST00000446716 TRIM44Q96DX7 344 aaPredicted RBP22.6■■□□□ 1.21
ATG9A-215ENST00000446716 COG3Q96JB2 828 aa22.6■■□□□ 1.21
ATG9A-215ENST00000446716 TAF7LQ5H9L4 462 aa22.59■■□□□ 1.21
ATG9A-215ENST00000446716 HDAC5Q9UQL6 1122 aa22.59■■□□□ 1.21
ATG9A-215ENST00000446716 EVA1CP58658 441 aa22.58■■□□□ 1.21
ATG9A-215ENST00000446716 GORABQ5T7V8 394 aa22.58■■□□□ 1.2
ATG9A-215ENST00000446716 CFAP44Q96MT7 982 aa22.58■■□□□ 1.2
ATG9A-215ENST00000446716 SMC4Q9NTJ3 1288 aa22.57■■□□□ 1.2
ATG9A-215ENST00000446716 RCAN3Q9UKA8 241 aa22.57■■□□□ 1.2
ATG9A-215ENST00000446716 CCDC146Q8IYE0 955 aa22.57■■□□□ 1.2
ATG9A-215ENST00000446716 PTMAP06454 111 aaKnown RBP22.56■■□□□ 1.2
ATG9A-215ENST00000446716 GTF2E1P29083 439 aaPredicted RBP22.56■■□□□ 1.2
ATG9A-215ENST00000446716 KIAA1211Q6ZU35 1233 aa22.56■■□□□ 1.2
ATG9A-215ENST00000446716 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.55■■□□□ 1.2
ATG9A-215ENST00000446716 MYOM3Q5VTT5 1437 aa22.55■■□□□ 1.2
ATG9A-215ENST00000446716 SLC4A10Q6U841 1118 aa22.54■■□□□ 1.2
ATG9A-215ENST00000446716 PANK3Q9H999 370 aa22.53■■□□□ 1.2
ATG9A-215ENST00000446716 GRIN2BQ13224 1484 aa22.53■■□□□ 1.2
ATG9A-215ENST00000446716 RWDD1Q9H446 243 aaPredicted RBP22.53■■□□□ 1.2
ATG9A-215ENST00000446716 GOLGA6L4A6NEF3 574 aa22.52■■□□□ 1.2
ATG9A-215ENST00000446716 HSCBQ8IWL3 235 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms