RNA–Protein interactions for RNA: ENST00000446026.1

SMIM12-204, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-204ENST00000446026 COL17A1Q9UMD9 1497 aaPredicted RBP13.2□□□□□ -0.3
SMIM12-204ENST00000446026 MAGI2Q86UL8 1455 aa13.2□□□□□ -0.3
SMIM12-204ENST00000446026 REREQ9P2R6 1566 aa13.19□□□□□ -0.3
SMIM12-204ENST00000446026 CLIP1P30622 1438 aa13.19□□□□□ -0.3
SMIM12-204ENST00000446026 CDC42BPBQ9Y5S2 1711 aa13.18□□□□□ -0.3
SMIM12-204ENST00000446026 CDC42BPAQ5VT25 1732 aa13.18□□□□□ -0.3
SMIM12-204ENST00000446026 ITSN2Q9NZM3 1697 aa13.18□□□□□ -0.3
SMIM12-204ENST00000446026 PLCH2O75038 1416 aa13.17□□□□□ -0.3
SMIM12-204ENST00000446026 KDM5CP41229 1560 aa13.17□□□□□ -0.3
SMIM12-204ENST00000446026 MAP3K1Q13233 1512 aa13.16□□□□□ -0.3
SMIM12-204ENST00000446026 ADAMTSL3P82987 1691 aa13.15□□□□□ -0.3
SMIM12-204ENST00000446026 FANCAO15360 1455 aa13.14□□□□□ -0.31
SMIM12-204ENST00000446026 EHBP1L1Q8N3D4 1523 aa13.14□□□□□ -0.31
SMIM12-204ENST00000446026 ZNF316A6NFI3 1004 aaPredicted RBP13.14□□□□□ -0.31
SMIM12-204ENST00000446026 PLEKHD1A6NEE1 506 aa13.14□□□□□ -0.31
SMIM12-204ENST00000446026 PRKCSHP14314 528 aaPredicted RBP13.14□□□□□ -0.31
SMIM12-204ENST00000446026 BCORL1Q5H9F3 1711 aa13.14□□□□□ -0.31
SMIM12-204ENST00000446026 CDK11AQ9UQ88 783 aaPredicted RBP13.13□□□□□ -0.31
SMIM12-204ENST00000446026 AKNAQ7Z591 1439 aa13.12□□□□□ -0.31
SMIM12-204ENST00000446026 DENND4BO75064 1496 aaPredicted RBP13.12□□□□□ -0.31
SMIM12-204ENST00000446026 ANP32EQ9BTT0 268 aa13.12□□□□□ -0.31
SMIM12-204ENST00000446026 ABCC1P33527 1531 aa13.12□□□□□ -0.31
SMIM12-204ENST00000446026 P3H3Q8IVL6 736 aa13.12□□□□□ -0.31
SMIM12-204ENST00000446026 POGZQ7Z3K3 1410 aa13.11□□□□□ -0.31
SMIM12-204ENST00000446026 ADGRL1O94910 1474 aa13.1□□□□□ -0.31
SMIM12-204ENST00000446026 ZFYVE16Q7Z3T8 1539 aa13.1□□□□□ -0.31
SMIM12-204ENST00000446026 HECW2Q9P2P5 1572 aa13.09□□□□□ -0.31
SMIM12-204ENST00000446026 MIER1Q8N108 512 aa13.09□□□□□ -0.31
SMIM12-204ENST00000446026 SUPT6HQ7KZ85 1726 aaKnown RBP13.07□□□□□ -0.32
SMIM12-204ENST00000446026 PLEKHH2Q8IVE3 1493 aa13.07□□□□□ -0.32
SMIM12-204ENST00000446026 ZNF518AQ6AHZ1 1483 aa13.07□□□□□ -0.32
SMIM12-204ENST00000446026 TIAM1Q13009 1591 aa13.06□□□□□ -0.32
SMIM12-204ENST00000446026 ARHGAP5Q13017 1502 aa13.04□□□□□ -0.32
SMIM12-204ENST00000446026 MLH3Q9UHC1 1453 aa13.04□□□□□ -0.32
SMIM12-204ENST00000446026 AGLP35573 1532 aa13.04□□□□□ -0.32
SMIM12-204ENST00000446026 KCNH8Q96L42 1107 aa13.03□□□□□ -0.32
SMIM12-204ENST00000446026 SAMD9LQ8IVG5 1584 aa13.03□□□□□ -0.32
SMIM12-204ENST00000446026 INO80Q9ULG1 1556 aaPredicted RBP13.03□□□□□ -0.32
SMIM12-204ENST00000446026 VPS8Q8N3P4 1428 aa13.03□□□□□ -0.32
SMIM12-204ENST00000446026 KIAA1107Q9UPP5 1409 aa13.03□□□□□ -0.32
SMIM12-204ENST00000446026 FAM135AQ9P2D6 1515 aa13.02□□□□□ -0.32
SMIM12-204ENST00000446026 DIP2CQ9Y2E4 1556 aa13.02□□□□□ -0.32
SMIM12-204ENST00000446026 ADGBQ8N7X0 1667 aa13.02□□□□□ -0.33
SMIM12-204ENST00000446026 APLP2Q06481 763 aa13.02□□□□□ -0.33
SMIM12-204ENST00000446026 MROH2AA6NES4 1674 aa13.01□□□□□ -0.33
SMIM12-204ENST00000446026 SIGLEC1Q9BZZ2 1709 aa13.01□□□□□ -0.33
SMIM12-204ENST00000446026 FER1L4A9Z1Z3 1794 aa13.01□□□□□ -0.33
SMIM12-204ENST00000446026 KIDINS220Q9ULH0 1771 aa13□□□□□ -0.33
SMIM12-204ENST00000446026 ABCA6Q8N139 1617 aa13□□□□□ -0.33
SMIM12-204ENST00000446026 ARHGEF12Q9NZN5 1544 aa13□□□□□ -0.33
SMIM12-204ENST00000446026 C9orf84Q5VXU9 1444 aa13□□□□□ -0.33
SMIM12-204ENST00000446026 ARHGEF5Q12774 1597 aa12.99□□□□□ -0.33
SMIM12-204ENST00000446026 GPATCH8Q9UKJ3 1502 aaKnown RBP12.99□□□□□ -0.33
SMIM12-204ENST00000446026 EFCAB2Q5VUJ9 269 aa12.98□□□□□ -0.33
SMIM12-204ENST00000446026 ATP10AO60312 1499 aa12.98□□□□□ -0.33
SMIM12-204ENST00000446026 PLXNC1O60486 1568 aa12.98□□□□□ -0.33
SMIM12-204ENST00000446026 KDM4FA0A1W2PPD8 638 aa12.98□□□□□ -0.33
SMIM12-204ENST00000446026 MADDQ8WXG6 1647 aa12.97□□□□□ -0.33
SMIM12-204ENST00000446026 SCAPERQ9BY12 1400 aa12.97□□□□□ -0.33
SMIM12-204ENST00000446026 MAST1Q9Y2H9 1570 aa12.97□□□□□ -0.33
SMIM12-204ENST00000446026 KANK4Q5T7N3 995 aaPredicted RBP12.96□□□□□ -0.34
SMIM12-204ENST00000446026 AEBP2Q6ZN18 517 aaPredicted RBP12.94□□□□□ -0.34
SMIM12-204ENST00000446026 RIMS1Q86UR5 1692 aaKnown RBP12.94□□□□□ -0.34
SMIM12-204ENST00000446026 CROCC2H7BZ55 1655 aa12.93□□□□□ -0.34
SMIM12-204ENST00000446026 SYCP2Q9BX26 1530 aa12.93□□□□□ -0.34
SMIM12-204ENST00000446026 RTEL1-TNFRSF6BF6WH68 1400 aa12.93□□□□□ -0.34
SMIM12-204ENST00000446026 TSHZ2Q9NRE2 1034 aa12.93□□□□□ -0.34
SMIM12-204ENST00000446026 ATP7AQ04656 1500 aa12.92□□□□□ -0.34
SMIM12-204ENST00000446026 LRRC9Q6ZRR7 1453 aa12.92□□□□□ -0.34
SMIM12-204ENST00000446026 PREX1Q8TCU6 1659 aa12.91□□□□□ -0.34
SMIM12-204ENST00000446026 EIF2AK4Q9P2K8 1649 aaKnown RBP12.91□□□□□ -0.34
SMIM12-204ENST00000446026 PTPRMP28827 1452 aa12.91□□□□□ -0.34
SMIM12-204ENST00000446026 ARID3CA6NKF2 412 aa12.9□□□□□ -0.34
SMIM12-204ENST00000446026 ITGAEP38570 1179 aa12.9□□□□□ -0.34
SMIM12-204ENST00000446026 MTUS2Q5JR59 1369 aa12.9□□□□□ -0.34
SMIM12-204ENST00000446026 NCOA2Q15596 1464 aa12.9□□□□□ -0.34
SMIM12-204ENST00000446026 YEATS2Q9ULM3 1422 aa12.89□□□□□ -0.35
SMIM12-204ENST00000446026 MIA2Q96PC5 1412 aa12.89□□□□□ -0.35
SMIM12-204ENST00000446026 CCNB3Q8WWL7 1395 aa12.89□□□□□ -0.35
SMIM12-204ENST00000446026 MBD5Q9P267 1494 aa12.88□□□□□ -0.35
SMIM12-204ENST00000446026 ZC3H13Q5T200 1668 aaKnown RBP12.87□□□□□ -0.35
SMIM12-204ENST00000446026 SUPT16HQ9Y5B9 1047 aaKnown RBP12.87□□□□□ -0.35
SMIM12-204ENST00000446026 DHX57Q6P158 1386 aaKnown RBP12.87□□□□□ -0.35
SMIM12-204ENST00000446026 CNTLNQ9NXG0 1405 aa12.87□□□□□ -0.35
SMIM12-204ENST00000446026 TRAPPC8Q9Y2L5 1435 aa12.87□□□□□ -0.35
SMIM12-204ENST00000446026 RAPGEF3O95398 923 aa12.86□□□□□ -0.35
SMIM12-204ENST00000446026 RNF17Q9BXT8 1623 aaKnown RBP12.86□□□□□ -0.35
SMIM12-204ENST00000446026 SHANK2Q9UPX8 1470 aa12.86□□□□□ -0.35
SMIM12-204ENST00000446026 ZNF142P52746 1687 aaPredicted RBP12.86□□□□□ -0.35
SMIM12-204ENST00000446026 CAMSAP2Q08AD1 1489 aa12.85□□□□□ -0.35
SMIM12-204ENST00000446026 CCDC141Q6ZP82 1450 aa12.85□□□□□ -0.35
SMIM12-204ENST00000446026 C3P01024 1663 aa12.85□□□□□ -0.35
SMIM12-204ENST00000446026 TCOF1Q13428 1488 aaKnown RBP12.84□□□□□ -0.35
SMIM12-204ENST00000446026 RSPH4AQ5TD94 716 aa12.84□□□□□ -0.35
SMIM12-204ENST00000446026 DNMT1P26358 1616 aaKnown RBP12.81□□□□□ -0.36
SMIM12-204ENST00000446026 MYOM3Q5VTT5 1437 aa12.81□□□□□ -0.36
SMIM12-204ENST00000446026 SETD1BQ9UPS6 1966 aaKnown RBP12.8□□□□□ -0.36
SMIM12-204ENST00000446026 A2MP01023 1474 aa12.8□□□□□ -0.36
SMIM12-204ENST00000446026 ATP1B4Q9UN42 357 aaPredicted RBP12.8□□□□□ -0.36
SMIM12-204ENST00000446026 PPP6R1Q9UPN7 881 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms