RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 SLC24A1O60721 1099 aa19.25■□□□□ 0.67
LTBR-204ENST00000444814 TTC37Q6PGP7 1564 aa19.25■□□□□ 0.67
LTBR-204ENST00000444814 EHBP1L1Q8N3D4 1523 aa19.24■□□□□ 0.67
LTBR-204ENST00000444814 MAP3K1Q13233 1512 aa19.21■□□□□ 0.67
LTBR-204ENST00000444814 MYO5CQ9NQX4 1742 aa19.21■□□□□ 0.67
LTBR-204ENST00000444814 AKNAQ7Z591 1439 aa19.21■□□□□ 0.67
LTBR-204ENST00000444814 ARHGAP5Q13017 1502 aa19.19■□□□□ 0.66
LTBR-204ENST00000444814 CCNB3Q8WWL7 1395 aa19.19■□□□□ 0.66
LTBR-204ENST00000444814 DENND4BO75064 1496 aaPredicted RBP19.19■□□□□ 0.66
LTBR-204ENST00000444814 TIAM1Q13009 1591 aa19.18■□□□□ 0.66
LTBR-204ENST00000444814 ADGRL1O94910 1474 aa19.16■□□□□ 0.66
LTBR-204ENST00000444814 COL17A1Q9UMD9 1497 aaPredicted RBP19.15■□□□□ 0.66
LTBR-204ENST00000444814 CFDP1Q9UEE9 299 aaPredicted RBP19.13■□□□□ 0.65
LTBR-204ENST00000444814 PREX2Q70Z35 1606 aa19.12■□□□□ 0.65
LTBR-204ENST00000444814 SCAPERQ9BY12 1400 aa19.12■□□□□ 0.65
LTBR-204ENST00000444814 LRRC9Q6ZRR7 1453 aa19.12■□□□□ 0.65
LTBR-204ENST00000444814 SUPT6HQ7KZ85 1726 aaKnown RBP19.12■□□□□ 0.65
LTBR-204ENST00000444814 PLEKHH2Q8IVE3 1493 aa19.11■□□□□ 0.65
LTBR-204ENST00000444814 RAPGEF3O95398 923 aa19.1■□□□□ 0.65
LTBR-204ENST00000444814 GPATCH8Q9UKJ3 1502 aaKnown RBP19.09■□□□□ 0.65
LTBR-204ENST00000444814 ITSN2Q9NZM3 1697 aa19.08■□□□□ 0.65
LTBR-204ENST00000444814 ZNF777Q9ULD5 760 aaPredicted RBP19.08■□□□□ 0.65
LTBR-204ENST00000444814 ZNF518AQ6AHZ1 1483 aa19.08■□□□□ 0.64
LTBR-204ENST00000444814 MAGI2Q86UL8 1455 aa19.08■□□□□ 0.64
LTBR-204ENST00000444814 POGZQ7Z3K3 1410 aa19.07■□□□□ 0.64
LTBR-204ENST00000444814 NCOA2Q15596 1464 aa19.07■□□□□ 0.64
LTBR-204ENST00000444814 CDC42BPAQ5VT25 1732 aa19.05■□□□□ 0.64
LTBR-204ENST00000444814 CDC42BPBQ9Y5S2 1711 aa19.05■□□□□ 0.64
LTBR-204ENST00000444814 MYT1LQ9UL68 1186 aa19.05■□□□□ 0.64
LTBR-204ENST00000444814 KIAA1107Q9UPP5 1409 aa19.03■□□□□ 0.64
LTBR-204ENST00000444814 ZMYM4Q5VZL5 1548 aa19.03■□□□□ 0.64
LTBR-204ENST00000444814 ABCC1P33527 1531 aa19.02■□□□□ 0.64
LTBR-204ENST00000444814 RICTORQ6R327 1708 aa19.01■□□□□ 0.63
LTBR-204ENST00000444814 RSPH4AQ5TD94 716 aa19.01■□□□□ 0.63
LTBR-204ENST00000444814 FRMPD1Q5SYB0 1578 aa19■□□□□ 0.63
LTBR-204ENST00000444814 KANK4Q5T7N3 995 aaPredicted RBP19■□□□□ 0.63
LTBR-204ENST00000444814 ZFYVE16Q7Z3T8 1539 aa18.99■□□□□ 0.63
LTBR-204ENST00000444814 ARHGEF40Q8TER5 1519 aa18.97■□□□□ 0.63
LTBR-204ENST00000444814 MIA2Q96PC5 1412 aa18.97■□□□□ 0.63
LTBR-204ENST00000444814 AFAP1Q8N556 730 aa18.97■□□□□ 0.63
LTBR-204ENST00000444814 MYOM3Q5VTT5 1437 aa18.96■□□□□ 0.63
LTBR-204ENST00000444814 ARID4BQ4LE39 1312 aaPredicted RBP18.96■□□□□ 0.63
LTBR-204ENST00000444814 SAMD9LQ8IVG5 1584 aa18.96■□□□□ 0.63
LTBR-204ENST00000444814 KDM5CP41229 1560 aa18.95■□□□□ 0.62
LTBR-204ENST00000444814 SPAG9O60271 1321 aaKnown RBP18.94■□□□□ 0.62
LTBR-204ENST00000444814 SYCP2Q9BX26 1530 aa18.94■□□□□ 0.62
LTBR-204ENST00000444814 MLH3Q9UHC1 1453 aa18.94■□□□□ 0.62
LTBR-204ENST00000444814 HNRNPMP52272 730 aaKnown RBP eCLIP18.93■□□□□ 0.62
LTBR-204ENST00000444814 HECW2Q9P2P5 1572 aa18.93■□□□□ 0.62
LTBR-204ENST00000444814 TRAPPC8Q9Y2L5 1435 aa18.93■□□□□ 0.62
LTBR-204ENST00000444814 ATP10AO60312 1499 aa18.92■□□□□ 0.62
LTBR-204ENST00000444814 C9orf84Q5VXU9 1444 aa18.91■□□□□ 0.62
LTBR-204ENST00000444814 ARHGEF12Q9NZN5 1544 aa18.91■□□□□ 0.62
LTBR-204ENST00000444814 CAMSAP2Q08AD1 1489 aa18.91■□□□□ 0.62
LTBR-204ENST00000444814 TSPY4P0CV99 314 aa18.9■□□□□ 0.62
LTBR-204ENST00000444814 TSPY10P0CW01 314 aa18.9■□□□□ 0.62
LTBR-204ENST00000444814 YEATS2Q9ULM3 1422 aa18.89■□□□□ 0.61
LTBR-204ENST00000444814 CCDC141Q6ZP82 1450 aa18.88■□□□□ 0.61
LTBR-204ENST00000444814 ZNF644Q9H582 1327 aaPredicted RBP18.87■□□□□ 0.61
LTBR-204ENST00000444814 RTEL1-TNFRSF6BF6WH68 1400 aa18.86■□□□□ 0.61
LTBR-204ENST00000444814 MBD5Q9P267 1494 aa18.85■□□□□ 0.61
LTBR-204ENST00000444814 ARHGEF5Q12774 1597 aa18.84■□□□□ 0.61
LTBR-204ENST00000444814 ATP7AQ04656 1500 aa18.84■□□□□ 0.61
LTBR-204ENST00000444814 FGD6Q6ZV73 1430 aa18.83■□□□□ 0.61
LTBR-204ENST00000444814 KDM4FA0A1W2PPD8 638 aa18.83■□□□□ 0.6
LTBR-204ENST00000444814 REREQ9P2R6 1566 aa18.83■□□□□ 0.6
LTBR-204ENST00000444814 DIP2CQ9Y2E4 1556 aa18.81■□□□□ 0.6
LTBR-204ENST00000444814 ESF1Q9H501 851 aaKnown RBP18.81■□□□□ 0.6
LTBR-204ENST00000444814 PTPN23Q9H3S7 1636 aa18.79■□□□□ 0.6
LTBR-204ENST00000444814 INO80Q9ULG1 1556 aaPredicted RBP18.79■□□□□ 0.6
LTBR-204ENST00000444814 KIDINS220Q9ULH0 1771 aa18.79■□□□□ 0.6
LTBR-204ENST00000444814 AGLP35573 1532 aa18.78■□□□□ 0.6
LTBR-204ENST00000444814 ABCA6Q8N139 1617 aa18.78■□□□□ 0.6
LTBR-204ENST00000444814 TCOF1Q13428 1488 aaKnown RBP18.77■□□□□ 0.6
LTBR-204ENST00000444814 A2MP01023 1474 aa18.77■□□□□ 0.59
LTBR-204ENST00000444814 BCORL1Q5H9F3 1711 aa18.76■□□□□ 0.59
LTBR-204ENST00000444814 MLECQ14165 292 aa18.76■□□□□ 0.59
LTBR-204ENST00000444814 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
LTBR-204ENST00000444814 SHANK2Q9UPX8 1470 aa18.74■□□□□ 0.59
LTBR-204ENST00000444814 ADGBQ8N7X0 1667 aa18.74■□□□□ 0.59
LTBR-204ENST00000444814 MAST1Q9Y2H9 1570 aa18.73■□□□□ 0.59
LTBR-204ENST00000444814 DHX29Q7Z478 1369 aaKnown RBP18.72■□□□□ 0.59
LTBR-204ENST00000444814 ADAMTSL3P82987 1691 aa18.72■□□□□ 0.59
LTBR-204ENST00000444814 DAPK1P53355 1430 aa18.71■□□□□ 0.59
LTBR-204ENST00000444814 CNTLNQ9NXG0 1405 aa18.69■□□□□ 0.58
LTBR-204ENST00000444814 ANKRD30AQ9BXX3 1397 aa18.69■□□□□ 0.58
LTBR-204ENST00000444814 DNMT1P26358 1616 aaKnown RBP18.69■□□□□ 0.58
LTBR-204ENST00000444814 PPARGC1BQ86YN6 1023 aaKnown RBP18.68■□□□□ 0.58
LTBR-204ENST00000444814 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.68■□□□□ 0.58
LTBR-204ENST00000444814 ABCC5O15440 1437 aa18.68■□□□□ 0.58
LTBR-204ENST00000444814 PLXNC1O60486 1568 aa18.68■□□□□ 0.58
LTBR-204ENST00000444814 PTPRMP28827 1452 aa18.67■□□□□ 0.58
LTBR-204ENST00000444814 MADDQ8WXG6 1647 aa18.67■□□□□ 0.58
LTBR-204ENST00000444814 KIF3BO15066 747 aa18.64■□□□□ 0.58
LTBR-204ENST00000444814 GGT6Q6P531 493 aa18.64■□□□□ 0.58
LTBR-204ENST00000444814 FER1L4A9Z1Z3 1794 aa18.64■□□□□ 0.57
LTBR-204ENST00000444814 CROCC2H7BZ55 1655 aa18.64■□□□□ 0.57
LTBR-204ENST00000444814 DUOX2Q9NRD8 1548 aa18.64■□□□□ 0.57
LTBR-204ENST00000444814 KIF15Q9NS87 1388 aa18.63■□□□□ 0.57
LTBR-204ENST00000444814 RIMS1Q86UR5 1692 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms