RNA–Protein interactions for RNA: ENST00000444658.7

CCNDBP1-202, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-202ENST00000444658 NPM1P06748 294 aaKnown RBP eCLIP13.79□□□□□ -0.2
CCNDBP1-202ENST00000444658 SETD5Q9C0A6 1442 aa13.77□□□□□ -0.2
CCNDBP1-202ENST00000444658 CCER1Q8TC90 406 aaPredicted RBP13.77□□□□□ -0.21
CCNDBP1-202ENST00000444658 PTPN23Q9H3S7 1636 aa13.77□□□□□ -0.21
CCNDBP1-202ENST00000444658 KIF14Q15058 1648 aa13.76□□□□□ -0.21
CCNDBP1-202ENST00000444658 ITGAEP38570 1179 aa13.75□□□□□ -0.21
CCNDBP1-202ENST00000444658 ROCK1Q13464 1354 aa13.74□□□□□ -0.21
CCNDBP1-202ENST00000444658 PTPRKQ15262 1439 aa13.74□□□□□ -0.21
CCNDBP1-202ENST00000444658 AKNAQ7Z591 1439 aa13.74□□□□□ -0.21
CCNDBP1-202ENST00000444658 HFM1A2PYH4 1435 aa13.73□□□□□ -0.21
CCNDBP1-202ENST00000444658 ZCCHC11Q5TAX3 1644 aaKnown RBP13.71□□□□□ -0.21
CCNDBP1-202ENST00000444658 PLCH2O75038 1416 aa13.71□□□□□ -0.21
CCNDBP1-202ENST00000444658 ZNF644Q9H582 1327 aaPredicted RBP13.71□□□□□ -0.22
CCNDBP1-202ENST00000444658 RAB3GAP2Q9H2M9 1393 aa13.71□□□□□ -0.22
CCNDBP1-202ENST00000444658 ABCC5O15440 1437 aa13.7□□□□□ -0.22
CCNDBP1-202ENST00000444658 WDR7Q9Y4E6 1490 aa13.7□□□□□ -0.22
CCNDBP1-202ENST00000444658 KCNH8Q96L42 1107 aa13.7□□□□□ -0.22
CCNDBP1-202ENST00000444658 ITSN2Q9NZM3 1697 aa13.7□□□□□ -0.22
CCNDBP1-202ENST00000444658 KIAA1107Q9UPP5 1409 aa13.7□□□□□ -0.22
CCNDBP1-202ENST00000444658 EFCAB2Q5VUJ9 269 aa13.69□□□□□ -0.22
CCNDBP1-202ENST00000444658 DAPK1P53355 1430 aa13.69□□□□□ -0.22
CCNDBP1-202ENST00000444658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCNDBP1-202ENST00000444658 KCNA4P22459 653 aa13.68□□□□□ -0.22
CCNDBP1-202ENST00000444658 ARAP3Q8WWN8 1544 aa13.68□□□□□ -0.22
CCNDBP1-202ENST00000444658 NAIPQ13075 1403 aa13.67□□□□□ -0.22
CCNDBP1-202ENST00000444658 ASXL2Q76L83 1435 aa13.67□□□□□ -0.22
CCNDBP1-202ENST00000444658 CAMSAP2Q08AD1 1489 aa13.67□□□□□ -0.22
CCNDBP1-202ENST00000444658 PLEKHH2Q8IVE3 1493 aa13.67□□□□□ -0.22
CCNDBP1-202ENST00000444658 TSPY4P0CV99 314 aa13.67□□□□□ -0.22
CCNDBP1-202ENST00000444658 TSPY10P0CW01 314 aa13.67□□□□□ -0.22
CCNDBP1-202ENST00000444658 DHX57Q6P158 1386 aaKnown RBP13.67□□□□□ -0.22
CCNDBP1-202ENST00000444658 CYB5RLQ6IPT4 315 aa13.66□□□□□ -0.22
CCNDBP1-202ENST00000444658 ZNF777Q9ULD5 760 aaPredicted RBP13.66□□□□□ -0.22
CCNDBP1-202ENST00000444658 MBD5Q9P267 1494 aa13.65□□□□□ -0.22
CCNDBP1-202ENST00000444658 DNMT1P26358 1616 aaKnown RBP13.65□□□□□ -0.22
CCNDBP1-202ENST00000444658 NCOA1Q15788 1441 aa13.64□□□□□ -0.23
CCNDBP1-202ENST00000444658 ADGRL2O95490 1459 aa13.64□□□□□ -0.23
CCNDBP1-202ENST00000444658 SHANK2Q9UPX8 1470 aa13.63□□□□□ -0.23
CCNDBP1-202ENST00000444658 CDC42BPAQ5VT25 1732 aa13.63□□□□□ -0.23
CCNDBP1-202ENST00000444658 ARHGEF5Q12774 1597 aa13.62□□□□□ -0.23
CCNDBP1-202ENST00000444658 CHIC2Q9UKJ5 165 aa13.62□□□□□ -0.23
CCNDBP1-202ENST00000444658 PREX2Q70Z35 1606 aa13.62□□□□□ -0.23
CCNDBP1-202ENST00000444658 ANKRD30AQ9BXX3 1397 aa13.62□□□□□ -0.23
CCNDBP1-202ENST00000444658 HNRNPMP52272 730 aaKnown RBP eCLIP13.61□□□□□ -0.23
CCNDBP1-202ENST00000444658 RRP7BPQ9NSQ0 103 aa13.61□□□□□ -0.23
CCNDBP1-202ENST00000444658 RIMBP3CA6NJZ7 1639 aa13.61□□□□□ -0.23
CCNDBP1-202ENST00000444658 RIMBP3BA6NNM3 1639 aa13.61□□□□□ -0.23
CCNDBP1-202ENST00000444658 RIMBP3Q9UFD9 1639 aa13.61□□□□□ -0.23
CCNDBP1-202ENST00000444658 MAPKBP1O60336 1514 aa13.6□□□□□ -0.23
CCNDBP1-202ENST00000444658 TTC37Q6PGP7 1564 aa13.6□□□□□ -0.23
CCNDBP1-202ENST00000444658 ARHGAP5Q13017 1502 aa13.59□□□□□ -0.23
CCNDBP1-202ENST00000444658 ABCA9Q8IUA7 1624 aa13.59□□□□□ -0.23
CCNDBP1-202ENST00000444658 RNF216Q9NWF9 866 aaPredicted RBP13.59□□□□□ -0.23
CCNDBP1-202ENST00000444658 TIMELESSQ9UNS1 1208 aa13.59□□□□□ -0.23
CCNDBP1-202ENST00000444658 CDC42BPBQ9Y5S2 1711 aa13.58□□□□□ -0.24
CCNDBP1-202ENST00000444658 CCDC141Q6ZP82 1450 aa13.58□□□□□ -0.24
CCNDBP1-202ENST00000444658 C9orf84Q5VXU9 1444 aa13.57□□□□□ -0.24
CCNDBP1-202ENST00000444658 NPM3O75607 178 aaKnown RBP13.56□□□□□ -0.24
CCNDBP1-202ENST00000444658 SAMD9LQ8IVG5 1584 aa13.56□□□□□ -0.24
CCNDBP1-202ENST00000444658 RTEL1-TNFRSF6BF6WH68 1400 aa13.56□□□□□ -0.24
CCNDBP1-202ENST00000444658 HOXD11P31277 338 aaPredicted RBP13.55□□□□□ -0.24
CCNDBP1-202ENST00000444658 MYO5CQ9NQX4 1742 aa13.55□□□□□ -0.24
CCNDBP1-202ENST00000444658 CD109Q6YHK3 1445 aa13.55□□□□□ -0.24
CCNDBP1-202ENST00000444658 MAST1Q9Y2H9 1570 aa13.53□□□□□ -0.24
CCNDBP1-202ENST00000444658 FANCAO15360 1455 aa13.53□□□□□ -0.24
CCNDBP1-202ENST00000444658 GLI2P10070 1586 aa13.52□□□□□ -0.25
CCNDBP1-202ENST00000444658 ANKRD50Q9ULJ7 1429 aa13.52□□□□□ -0.25
CCNDBP1-202ENST00000444658 ARHGEF12Q9NZN5 1544 aa13.51□□□□□ -0.25
CCNDBP1-202ENST00000444658 GCC2Q8IWJ2 1684 aa13.51□□□□□ -0.25
CCNDBP1-202ENST00000444658 MPHOSPH9Q99550 1183 aa13.5□□□□□ -0.25
CCNDBP1-202ENST00000444658 ABCC1P33527 1531 aa13.5□□□□□ -0.25
CCNDBP1-202ENST00000444658 NEO1Q92859 1461 aa13.49□□□□□ -0.25
CCNDBP1-202ENST00000444658 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
CCNDBP1-202ENST00000444658 KIF15Q9NS87 1388 aa13.49□□□□□ -0.25
CCNDBP1-202ENST00000444658 CROCC2H7BZ55 1655 aa13.49□□□□□ -0.25
CCNDBP1-202ENST00000444658 TRIM52Q96A61 297 aa13.48□□□□□ -0.25
CCNDBP1-202ENST00000444658 SCAPERQ9BY12 1400 aa13.48□□□□□ -0.25
CCNDBP1-202ENST00000444658 TRAPPC8Q9Y2L5 1435 aa13.48□□□□□ -0.25
CCNDBP1-202ENST00000444658 SPAG9O60271 1321 aaKnown RBP13.48□□□□□ -0.25
CCNDBP1-202ENST00000444658 AFAP1Q8N556 730 aa13.47□□□□□ -0.25
CCNDBP1-202ENST00000444658 ADGBQ8N7X0 1667 aa13.46□□□□□ -0.25
CCNDBP1-202ENST00000444658 ADGRL1O94910 1474 aa13.46□□□□□ -0.26
CCNDBP1-202ENST00000444658 FAM69CQ0P6D2 419 aa13.45□□□□□ -0.26
CCNDBP1-202ENST00000444658 PLXNC1O60486 1568 aa13.44□□□□□ -0.26
CCNDBP1-202ENST00000444658 CFAP74Q9C0B2 1584 aa13.44□□□□□ -0.26
CCNDBP1-202ENST00000444658 DUOX2Q9NRD8 1548 aa13.44□□□□□ -0.26
CCNDBP1-202ENST00000444658 ZNF518AQ6AHZ1 1483 aa13.43□□□□□ -0.26
CCNDBP1-202ENST00000444658 ERBINQ96RT1 1412 aa13.43□□□□□ -0.26
CCNDBP1-202ENST00000444658 SLC4A1APQ9BWU0 796 aaKnown RBP13.43□□□□□ -0.26
CCNDBP1-202ENST00000444658 KDM6BO15054 1643 aa13.42□□□□□ -0.26
CCNDBP1-202ENST00000444658 MLH3Q9UHC1 1453 aa13.41□□□□□ -0.26
CCNDBP1-202ENST00000444658 NUP155O75694 1391 aa13.41□□□□□ -0.26
CCNDBP1-202ENST00000444658 DHX29Q7Z478 1369 aaKnown RBP13.41□□□□□ -0.26
CCNDBP1-202ENST00000444658 KDM5DQ9BY66 1539 aa13.41□□□□□ -0.26
CCNDBP1-202ENST00000444658 DENND4BO75064 1496 aaPredicted RBP13.4□□□□□ -0.26
CCNDBP1-202ENST00000444658 ANKRD30BQ9BXX2 1392 aa13.4□□□□□ -0.26
CCNDBP1-202ENST00000444658 MAP3K4Q9Y6R4 1608 aa13.4□□□□□ -0.26
CCNDBP1-202ENST00000444658 SIN3AQ96ST3 1273 aa13.39□□□□□ -0.27
CCNDBP1-202ENST00000444658 POGZQ7Z3K3 1410 aa13.39□□□□□ -0.27
CCNDBP1-202ENST00000444658 PZPP20742 1482 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms