RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 ZFYVE16Q7Z3T8 1539 aa17.92■□□□□ 0.46
HLA-F-221ENST00000444621 YEATS2Q9ULM3 1422 aa17.91■□□□□ 0.46
HLA-F-221ENST00000444621 MLECQ14165 292 aa17.91■□□□□ 0.46
HLA-F-221ENST00000444621 TTC37Q6PGP7 1564 aa17.9■□□□□ 0.46
HLA-F-221ENST00000444621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.89■□□□□ 0.45
HLA-F-221ENST00000444621 SOCS7O14512 581 aa17.89■□□□□ 0.45
HLA-F-221ENST00000444621 CDK11AQ9UQ88 783 aaPredicted RBP17.88■□□□□ 0.45
HLA-F-221ENST00000444621 ARHGAP35Q9NRY4 1499 aa17.88■□□□□ 0.45
HLA-F-221ENST00000444621 HECW1Q76N89 1606 aa17.87■□□□□ 0.45
HLA-F-221ENST00000444621 PREX1Q8TCU6 1659 aa17.87■□□□□ 0.45
HLA-F-221ENST00000444621 MAGI2Q86UL8 1455 aa17.86■□□□□ 0.45
HLA-F-221ENST00000444621 STRCQ7RTU9 1775 aa17.84■□□□□ 0.45
HLA-F-221ENST00000444621 ARHGEF12Q9NZN5 1544 aa17.82■□□□□ 0.44
HLA-F-221ENST00000444621 CEBPAP49715 358 aaPredicted RBP17.8■□□□□ 0.44
HLA-F-221ENST00000444621 SCAPERQ9BY12 1400 aa17.8■□□□□ 0.44
HLA-F-221ENST00000444621 CLIP1P30622 1438 aa17.79■□□□□ 0.44
HLA-F-221ENST00000444621 SPATA31D1Q6ZQQ2 1576 aa17.79■□□□□ 0.44
HLA-F-221ENST00000444621 ATP10AO60312 1499 aa17.78■□□□□ 0.44
HLA-F-221ENST00000444621 DMRT2Q9Y5R5 561 aa17.78■□□□□ 0.44
HLA-F-221ENST00000444621 C9orf84Q5VXU9 1444 aa17.77■□□□□ 0.44
HLA-F-221ENST00000444621 CDK13Q14004 1512 aaKnown RBP17.75■□□□□ 0.43
HLA-F-221ENST00000444621 SETD1BQ9UPS6 1966 aaKnown RBP17.75■□□□□ 0.43
HLA-F-221ENST00000444621 PLCH2O75038 1416 aa17.74■□□□□ 0.43
HLA-F-221ENST00000444621 UHRF1BP1Q6BDS2 1440 aa17.73■□□□□ 0.43
HLA-F-221ENST00000444621 CASKIN1Q8WXD9 1431 aa17.72■□□□□ 0.43
HLA-F-221ENST00000444621 MYO5CQ9NQX4 1742 aa17.72■□□□□ 0.43
HLA-F-221ENST00000444621 CCDC18Q5T9S5 1454 aa17.71■□□□□ 0.43
HLA-F-221ENST00000444621 PTPRTO14522 1441 aa17.69■□□□□ 0.42
HLA-F-221ENST00000444621 EFCAB2Q5VUJ9 269 aa17.68■□□□□ 0.42
HLA-F-221ENST00000444621 FYCO1Q9BQS8 1478 aa17.68■□□□□ 0.42
HLA-F-221ENST00000444621 C3P01024 1663 aa17.67■□□□□ 0.42
HLA-F-221ENST00000444621 LTBP4Q8N2S1 1624 aa17.66■□□□□ 0.42
HLA-F-221ENST00000444621 KIF14Q15058 1648 aa17.65■□□□□ 0.42
HLA-F-221ENST00000444621 TROQ12816 1431 aaPredicted RBP17.65■□□□□ 0.42
HLA-F-221ENST00000444621 ZNF518AQ6AHZ1 1483 aa17.65■□□□□ 0.42
HLA-F-221ENST00000444621 CEP162Q5TB80 1403 aa17.64■□□□□ 0.42
HLA-F-221ENST00000444621 LOC105371045A0A1W2PR82 267 aa17.64■□□□□ 0.41
HLA-F-221ENST00000444621 AFAP1Q8N556 730 aa17.64■□□□□ 0.41
HLA-F-221ENST00000444621 KDM5CP41229 1560 aa17.64■□□□□ 0.41
HLA-F-221ENST00000444621 DIP2CQ9Y2E4 1556 aa17.63■□□□□ 0.41
HLA-F-221ENST00000444621 MYT1LQ9UL68 1186 aa17.63■□□□□ 0.41
HLA-F-221ENST00000444621 LRRIQ1Q96JM4 1722 aa17.62■□□□□ 0.41
HLA-F-221ENST00000444621 IQSEC2Q5JU85 1478 aa17.61■□□□□ 0.41
HLA-F-221ENST00000444621 ARHGAP5Q13017 1502 aa17.61■□□□□ 0.41
HLA-F-221ENST00000444621 REREQ9P2R6 1566 aa17.61■□□□□ 0.41
HLA-F-221ENST00000444621 ABCA6Q8N139 1617 aa17.6■□□□□ 0.41
HLA-F-221ENST00000444621 TRAPPC8Q9Y2L5 1435 aa17.58■□□□□ 0.41
HLA-F-221ENST00000444621 NCOA1Q15788 1441 aa17.57■□□□□ 0.4
HLA-F-221ENST00000444621 ESF1Q9H501 851 aaKnown RBP17.57■□□□□ 0.4
HLA-F-221ENST00000444621 CDC42BPBQ9Y5S2 1711 aa17.55■□□□□ 0.4
HLA-F-221ENST00000444621 AGLP35573 1532 aa17.55■□□□□ 0.4
HLA-F-221ENST00000444621 MLH3Q9UHC1 1453 aa17.55■□□□□ 0.4
HLA-F-221ENST00000444621 MTUS2Q5JR59 1369 aa17.54■□□□□ 0.4
HLA-F-221ENST00000444621 CAMSAP1Q5T5Y3 1602 aa17.53■□□□□ 0.4
HLA-F-221ENST00000444621 CNTLNQ9NXG0 1405 aa17.5■□□□□ 0.39
HLA-F-221ENST00000444621 UBAP1LF5GYI3 381 aa17.5■□□□□ 0.39
HLA-F-221ENST00000444621 ITSN2Q9NZM3 1697 aa17.5■□□□□ 0.39
HLA-F-221ENST00000444621 KIDINS220Q9ULH0 1771 aa17.5■□□□□ 0.39
HLA-F-221ENST00000444621 MROH2AA6NES4 1674 aa17.48■□□□□ 0.39
HLA-F-221ENST00000444621 ZNF335Q9H4Z2 1342 aaPredicted RBP17.48■□□□□ 0.39
HLA-F-221ENST00000444621 NCKAP5LQ9HCH0 1330 aa17.48■□□□□ 0.39
HLA-F-221ENST00000444621 ABCC1P33527 1531 aa17.48■□□□□ 0.39
HLA-F-221ENST00000444621 PREX2Q70Z35 1606 aa17.48■□□□□ 0.39
HLA-F-221ENST00000444621 APLP2Q06481 763 aa17.48■□□□□ 0.39
HLA-F-221ENST00000444621 CCNB3Q8WWL7 1395 aa17.48■□□□□ 0.39
HLA-F-221ENST00000444621 ZNF777Q9ULD5 760 aaPredicted RBP17.47■□□□□ 0.39
HLA-F-221ENST00000444621 SUPT6HQ7KZ85 1726 aaKnown RBP17.46■□□□□ 0.39
HLA-F-221ENST00000444621 NPATQ14207 1427 aa17.46■□□□□ 0.39
HLA-F-221ENST00000444621 VPS8Q8N3P4 1428 aa17.46■□□□□ 0.39
HLA-F-221ENST00000444621 CFDP1Q9UEE9 299 aaPredicted RBP17.45■□□□□ 0.38
HLA-F-221ENST00000444621 EHBP1L1Q8N3D4 1523 aa17.44■□□□□ 0.38
HLA-F-221ENST00000444621 CDC42BPAQ5VT25 1732 aa17.44■□□□□ 0.38
HLA-F-221ENST00000444621 ZMYM3Q14202 1370 aa17.43■□□□□ 0.38
HLA-F-221ENST00000444621 ZNF142P52746 1687 aaPredicted RBP17.42■□□□□ 0.38
HLA-F-221ENST00000444621 CLTCQ00610 1675 aaKnown RBP17.42■□□□□ 0.38
HLA-F-221ENST00000444621 MYO3AQ8NEV4 1616 aa17.41■□□□□ 0.38
HLA-F-221ENST00000444621 GPATCH8Q9UKJ3 1502 aaKnown RBP17.4■□□□□ 0.38
HLA-F-221ENST00000444621 SAMD9LQ8IVG5 1584 aa17.4■□□□□ 0.38
HLA-F-221ENST00000444621 PLEKHH2Q8IVE3 1493 aa17.39■□□□□ 0.37
HLA-F-221ENST00000444621 PLA2R1Q13018 1463 aa17.38■□□□□ 0.37
HLA-F-221ENST00000444621 MED1Q15648 1581 aaPredicted RBP17.38■□□□□ 0.37
HLA-F-221ENST00000444621 CEP170BQ9Y4F5 1589 aaPredicted RBP17.38■□□□□ 0.37
HLA-F-221ENST00000444621 PKD2Q13563 968 aa17.38■□□□□ 0.37
HLA-F-221ENST00000444621 TCOF1Q13428 1488 aaKnown RBP17.37■□□□□ 0.37
HLA-F-221ENST00000444621 TIAM1Q13009 1591 aa17.37■□□□□ 0.37
HLA-F-221ENST00000444621 HSPA1LP34931 641 aa17.35■□□□□ 0.37
HLA-F-221ENST00000444621 HNRNPMP52272 730 aaKnown RBP eCLIP17.35■□□□□ 0.37
HLA-F-221ENST00000444621 SPAG9O60271 1321 aaKnown RBP17.34■□□□□ 0.37
HLA-F-221ENST00000444621 PTPRKQ15262 1439 aa17.34■□□□□ 0.37
HLA-F-221ENST00000444621 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
HLA-F-221ENST00000444621 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
HLA-F-221ENST00000444621 MAP3K1Q13233 1512 aa17.33■□□□□ 0.37
HLA-F-221ENST00000444621 SYCP2Q9BX26 1530 aa17.33■□□□□ 0.37
HLA-F-221ENST00000444621 KIAA1107Q9UPP5 1409 aa17.33■□□□□ 0.36
HLA-F-221ENST00000444621 PIP4K2BP78356 416 aa17.33■□□□□ 0.36
HLA-F-221ENST00000444621 PLXNC1O60486 1568 aa17.32■□□□□ 0.36
HLA-F-221ENST00000444621 NCOA2Q15596 1464 aa17.31■□□□□ 0.36
HLA-F-221ENST00000444621 LRRC9Q6ZRR7 1453 aa17.31■□□□□ 0.36
HLA-F-221ENST00000444621 ATP7AQ04656 1500 aa17.31■□□□□ 0.36
HLA-F-221ENST00000444621 RSPH4AQ5TD94 716 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms