RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 CUX2O14529 1486 aa6.56□□□□□ -1.36
SCN11A-202ENST00000444237 PAK3O75914 559 aaPredicted RBP6.56□□□□□ -1.36
SCN11A-202ENST00000444237 PDCL3Q9H2J4 239 aa6.56□□□□□ -1.36
SCN11A-202ENST00000444237 SOGA1O94964 1423 aa6.56□□□□□ -1.36
SCN11A-202ENST00000444237 ABCC8Q09428 1581 aa6.56□□□□□ -1.36
SCN11A-202ENST00000444237 CCDC66A2RUB6 948 aa6.55□□□□□ -1.36
SCN11A-202ENST00000444237 ZNF777Q9ULD5 760 aaPredicted RBP6.55□□□□□ -1.36
SCN11A-202ENST00000444237 KIF27Q86VH2 1401 aa6.55□□□□□ -1.36
SCN11A-202ENST00000444237 SLKQ9H2G2 1235 aaPredicted RBP6.55□□□□□ -1.36
SCN11A-202ENST00000444237 NESP48681 1621 aa6.55□□□□□ -1.36
SCN11A-202ENST00000444237 TAF7LQ5H9L4 462 aa6.55□□□□□ -1.36
SCN11A-202ENST00000444237 TNIKQ9UKE5 1360 aa6.55□□□□□ -1.36
SCN11A-202ENST00000444237 NUDCQ9Y266 331 aa6.55□□□□□ -1.36
SCN11A-202ENST00000444237 MRE11P49959 708 aa6.54□□□□□ -1.36
SCN11A-202ENST00000444237 C11orf95C9JLR9 678 aaPredicted RBP6.54□□□□□ -1.36
SCN11A-202ENST00000444237 CALRP27797 417 aaKnown RBP6.54□□□□□ -1.36
SCN11A-202ENST00000444237 WDR43Q15061 677 aaKnown RBP eCLIP6.54□□□□□ -1.36
SCN11A-202ENST00000444237 SKOR2Q2VWA4 1001 aaPredicted RBP6.54□□□□□ -1.36
SCN11A-202ENST00000444237 GOLGA6L6A8MZA4 724 aa6.53□□□□□ -1.36
SCN11A-202ENST00000444237 RBM10P98175 930 aaKnown RBP6.53□□□□□ -1.36
SCN11A-202ENST00000444237 CLIP1P30622 1438 aa6.53□□□□□ -1.36
SCN11A-202ENST00000444237 TDRD9Q8NDG6 1382 aaKnown RBP6.53□□□□□ -1.36
SCN11A-202ENST00000444237 TULP1O00294 542 aaPredicted RBP6.53□□□□□ -1.36
SCN11A-202ENST00000444237 NCBP3Q53F19 620 aaKnown RBP6.53□□□□□ -1.36
SCN11A-202ENST00000444237 GOLGA6L1Q8N7Z2 621 aa6.53□□□□□ -1.36
SCN11A-202ENST00000444237 NRDCO43847 1150 aa6.52□□□□□ -1.37
SCN11A-202ENST00000444237 HMGXB3Q12766 1538 aa6.52□□□□□ -1.37
SCN11A-202ENST00000444237 BBXQ8WY36 941 aaPredicted RBP6.52□□□□□ -1.37
SCN11A-202ENST00000444237 SLC4A1APQ9BWU0 796 aaKnown RBP6.52□□□□□ -1.37
SCN11A-202ENST00000444237 GOLGA3Q08378 1498 aa6.51□□□□□ -1.37
SCN11A-202ENST00000444237 ISY1Q9ULR0 285 aaKnown RBP6.51□□□□□ -1.37
SCN11A-202ENST00000444237 FAM161AQ3B820 660 aa6.51□□□□□ -1.37
SCN11A-202ENST00000444237 KCNH8Q96L42 1107 aa6.51□□□□□ -1.37
SCN11A-202ENST00000444237 ZBED9Q6R2W3 1325 aa6.5□□□□□ -1.37
SCN11A-202ENST00000444237 PLCB2Q00722 1185 aa6.5□□□□□ -1.37
SCN11A-202ENST00000444237 RCAN3Q9UKA8 241 aa6.5□□□□□ -1.37
SCN11A-202ENST00000444237 SYAP1Q96A49 352 aaPredicted RBP6.5□□□□□ -1.37
SCN11A-202ENST00000444237 DNAJC5Q9H3Z4 198 aa6.5□□□□□ -1.37
SCN11A-202ENST00000444237 MRC2Q9UBG0 1479 aa6.5□□□□□ -1.37
SCN11A-202ENST00000444237 CYB5RLQ6IPT4 315 aa6.49□□□□□ -1.37
SCN11A-202ENST00000444237 R3HCC1Q9Y3T6 440 aaKnown RBP6.49□□□□□ -1.37
SCN11A-202ENST00000444237 SETQ01105 290 aaPredicted RBP6.49□□□□□ -1.37
SCN11A-202ENST00000444237 TSPYL1Q9H0U9 437 aa6.49□□□□□ -1.37
SCN11A-202ENST00000444237 CALD1Q05682 793 aaKnown RBP6.48□□□□□ -1.37
SCN11A-202ENST00000444237 SPRYD3Q8NCJ5 442 aa6.48□□□□□ -1.37
SCN11A-202ENST00000444237 SLC4A3P48751 1232 aa6.48□□□□□ -1.37
SCN11A-202ENST00000444237 NOM1Q5C9Z4 860 aaKnown RBP6.48□□□□□ -1.37
SCN11A-202ENST00000444237 KIAA1211Q6ZU35 1233 aa6.48□□□□□ -1.37
SCN11A-202ENST00000444237 ESPNB1AK53 854 aa6.47□□□□□ -1.37
SCN11A-202ENST00000444237 CASC1Q6TDU7 716 aa6.47□□□□□ -1.37
SCN11A-202ENST00000444237 CFAP44Q96MT7 982 aa6.47□□□□□ -1.37
SCN11A-202ENST00000444237 C14orf37Q86TY3 774 aa6.47□□□□□ -1.37
SCN11A-202ENST00000444237 HTATSF1O43719 755 aaKnown RBP6.47□□□□□ -1.37
SCN11A-202ENST00000444237 HMGN5P82970 282 aaKnown RBP6.47□□□□□ -1.37
SCN11A-202ENST00000444237 TEX35Q5T0J7 233 aa6.47□□□□□ -1.37
SCN11A-202ENST00000444237 CARMIL1Q5VZK9 1371 aa6.47□□□□□ -1.37
SCN11A-202ENST00000444237 CENPQQ7L2Z9 268 aaPredicted RBP6.46□□□□□ -1.37
SCN11A-202ENST00000444237 CCDC173Q0VFZ6 552 aa6.46□□□□□ -1.38
SCN11A-202ENST00000444237 PDE3BQ13370 1112 aa6.46□□□□□ -1.38
SCN11A-202ENST00000444237 CHMP5Q9NZZ3 219 aa6.45□□□□□ -1.38
SCN11A-202ENST00000444237 FRAT2O75474 233 aaPredicted RBP6.45□□□□□ -1.38
SCN11A-202ENST00000444237 PHF14O94880 888 aa6.45□□□□□ -1.38
SCN11A-202ENST00000444237 GPS2Q13227 327 aa6.45□□□□□ -1.38
SCN11A-202ENST00000444237 ZRSR1Q15695 479 aaKnown RBP6.45□□□□□ -1.38
SCN11A-202ENST00000444237 FGD5Q6ZNL6 1462 aa6.45□□□□□ -1.38
SCN11A-202ENST00000444237 RAD54L2Q9Y4B4 1467 aa6.45□□□□□ -1.38
SCN11A-202ENST00000444237 DRC7Q8IY82 874 aa6.45□□□□□ -1.38
SCN11A-202ENST00000444237 ZBTB7CA1YPR0 619 aa6.45□□□□□ -1.38
SCN11A-202ENST00000444237 SIN3AQ96ST3 1273 aa6.45□□□□□ -1.38
SCN11A-202ENST00000444237 DIAPH3Q9NSV4 1193 aa6.45□□□□□ -1.38
SCN11A-202ENST00000444237 CLCN1P35523 988 aa6.44□□□□□ -1.38
SCN11A-202ENST00000444237 KLHL34Q8N239 644 aa6.44□□□□□ -1.38
SCN11A-202ENST00000444237 CWC15Q9P013 229 aaKnown RBP6.44□□□□□ -1.38
SCN11A-202ENST00000444237 CCDC39Q9UFE4 941 aa6.44□□□□□ -1.38
SCN11A-202ENST00000444237 WASHC2AQ641Q2 1341 aa6.44□□□□□ -1.38
SCN11A-202ENST00000444237 LAMC3Q9Y6N6 1575 aa6.44□□□□□ -1.38
SCN11A-202ENST00000444237 FGD1P98174 961 aa6.43□□□□□ -1.38
SCN11A-202ENST00000444237 MAPK8IP3Q9UPT6 1336 aa6.43□□□□□ -1.38
SCN11A-202ENST00000444237 UQCRHLA0A096LP55 91 aa6.43□□□□□ -1.38
SCN11A-202ENST00000444237 UQCRHP07919 91 aa6.43□□□□□ -1.38
SCN11A-202ENST00000444237 NAP1L2Q9ULW6 460 aaPredicted RBP6.43□□□□□ -1.38
SCN11A-202ENST00000444237 RRP1P56182 461 aaKnown RBP6.43□□□□□ -1.38
SCN11A-202ENST00000444237 IRX3P78415 501 aaPredicted RBP6.43□□□□□ -1.38
SCN11A-202ENST00000444237 DDX49Q9Y6V7 483 aaKnown RBP6.43□□□□□ -1.38
SCN11A-202ENST00000444237 WASHC2CQ9Y4E1 1318 aa6.43□□□□□ -1.38
SCN11A-202ENST00000444237 DHX57Q6P158 1386 aaKnown RBP6.43□□□□□ -1.38
SCN11A-202ENST00000444237 NASPP49321 788 aaPredicted RBP6.43□□□□□ -1.38
SCN11A-202ENST00000444237 CCNB3Q8WWL7 1395 aa6.42□□□□□ -1.38
SCN11A-202ENST00000444237 AQRO60306 1485 aaKnown RBP eCLIP6.42□□□□□ -1.38
SCN11A-202ENST00000444237 PLEKHD1A6NEE1 506 aa6.42□□□□□ -1.38
SCN11A-202ENST00000444237 CFTRP13569 1480 aa6.42□□□□□ -1.38
SCN11A-202ENST00000444237 FTSJ3Q8IY81 847 aaKnown RBP6.42□□□□□ -1.38
SCN11A-202ENST00000444237 SMAP1Q8IYB5 467 aaPredicted RBP6.42□□□□□ -1.38
SCN11A-202ENST00000444237 ZHX1Q9UKY1 873 aaPredicted RBP6.42□□□□□ -1.38
SCN11A-202ENST00000444237 CARMIL2Q6F5E8 1435 aa6.42□□□□□ -1.38
SCN11A-202ENST00000444237 KTN1Q86UP2 1357 aaKnown RBP6.42□□□□□ -1.38
SCN11A-202ENST00000444237 BACH2Q9BYV9 841 aa6.42□□□□□ -1.38
SCN11A-202ENST00000444237 CHMP4BQ9H444 224 aaKnown RBP6.42□□□□□ -1.38
SCN11A-202ENST00000444237 LETM1O95202 739 aaPredicted RBP6.41□□□□□ -1.38
SCN11A-202ENST00000444237 MTUS2Q5JR59 1369 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms