RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 MAGI2Q86UL8 1455 aa30.18■■■□□ 2.42
ATPAF2-201ENST00000444058 ARHGAP5Q13017 1502 aa30.17■■■□□ 2.42
ATPAF2-201ENST00000444058 POGZQ7Z3K3 1410 aa30.17■■■□□ 2.42
ATPAF2-201ENST00000444058 ARHGEF40Q8TER5 1519 aa30.14■■■□□ 2.42
ATPAF2-201ENST00000444058 PREX2Q70Z35 1606 aa30.11■■■□□ 2.41
ATPAF2-201ENST00000444058 CDC42BPBQ9Y5S2 1711 aa30.1■■■□□ 2.41
ATPAF2-201ENST00000444058 ZFYVE16Q7Z3T8 1539 aa30.08■■■□□ 2.41
ATPAF2-201ENST00000444058 ZNF518AQ6AHZ1 1483 aa30.07■■■□□ 2.4
ATPAF2-201ENST00000444058 MTUS2Q5JR59 1369 aa30.07■■■□□ 2.4
ATPAF2-201ENST00000444058 YEATS2Q9ULM3 1422 aa30.05■■■□□ 2.4
ATPAF2-201ENST00000444058 GPATCH8Q9UKJ3 1502 aaKnown RBP30.03■■■□□ 2.4
ATPAF2-201ENST00000444058 CDC42BPAQ5VT25 1732 aa30.02■■■□□ 2.4
ATPAF2-201ENST00000444058 ARID4BQ4LE39 1312 aaPredicted RBP30.02■■■□□ 2.4
ATPAF2-201ENST00000444058 KDM5CP41229 1560 aa30.01■■■□□ 2.39
ATPAF2-201ENST00000444058 VPS8Q8N3P4 1428 aa30■■■□□ 2.39
ATPAF2-201ENST00000444058 AFAP1Q8N556 730 aa30■■■□□ 2.39
ATPAF2-201ENST00000444058 ADAMTSL3P82987 1691 aa30■■■□□ 2.39
ATPAF2-201ENST00000444058 ABCC1P33527 1531 aa30■■■□□ 2.39
ATPAF2-201ENST00000444058 EHBP1L1Q8N3D4 1523 aa29.99■■■□□ 2.39
ATPAF2-201ENST00000444058 BCORL1Q5H9F3 1711 aa29.97■■■□□ 2.39
ATPAF2-201ENST00000444058 CCNB3Q8WWL7 1395 aa29.97■■■□□ 2.39
ATPAF2-201ENST00000444058 ATP10AO60312 1499 aa29.97■■■□□ 2.39
ATPAF2-201ENST00000444058 ARHGEF12Q9NZN5 1544 aa29.95■■■□□ 2.38
ATPAF2-201ENST00000444058 MLH3Q9UHC1 1453 aa29.94■■■□□ 2.38
ATPAF2-201ENST00000444058 CFDP1Q9UEE9 299 aaPredicted RBP29.93■■■□□ 2.38
ATPAF2-201ENST00000444058 C9orf84Q5VXU9 1444 aa29.92■■■□□ 2.38
ATPAF2-201ENST00000444058 TRAPPC8Q9Y2L5 1435 aa29.92■■■□□ 2.38
ATPAF2-201ENST00000444058 ITSN2Q9NZM3 1697 aa29.91■■■□□ 2.38
ATPAF2-201ENST00000444058 HECW2Q9P2P5 1572 aa29.9■■■□□ 2.38
ATPAF2-201ENST00000444058 KIAA1107Q9UPP5 1409 aa29.9■■■□□ 2.38
ATPAF2-201ENST00000444058 ZNF777Q9ULD5 760 aaPredicted RBP29.9■■■□□ 2.38
ATPAF2-201ENST00000444058 PLEKHH2Q8IVE3 1493 aa29.9■■■□□ 2.38
ATPAF2-201ENST00000444058 PTPRMP28827 1452 aa29.89■■■□□ 2.38
ATPAF2-201ENST00000444058 TIAM1Q13009 1591 aa29.89■■■□□ 2.38
ATPAF2-201ENST00000444058 SAMD9LQ8IVG5 1584 aa29.89■■■□□ 2.38
ATPAF2-201ENST00000444058 SIGLEC1Q9BZZ2 1709 aa29.85■■■□□ 2.37
ATPAF2-201ENST00000444058 MAP3K1Q13233 1512 aa29.85■■■□□ 2.37
ATPAF2-201ENST00000444058 MADDQ8WXG6 1647 aa29.85■■■□□ 2.37
ATPAF2-201ENST00000444058 MYT1LQ9UL68 1186 aa29.84■■■□□ 2.37
ATPAF2-201ENST00000444058 REREQ9P2R6 1566 aa29.83■■■□□ 2.37
ATPAF2-201ENST00000444058 SYCP2Q9BX26 1530 aa29.82■■■□□ 2.36
ATPAF2-201ENST00000444058 DIP2CQ9Y2E4 1556 aa29.81■■■□□ 2.36
ATPAF2-201ENST00000444058 NCOA2Q15596 1464 aa29.8■■■□□ 2.36
ATPAF2-201ENST00000444058 SUPT6HQ7KZ85 1726 aaKnown RBP29.8■■■□□ 2.36
ATPAF2-201ENST00000444058 HNRNPMP52272 730 aaKnown RBP eCLIP29.79■■■□□ 2.36
ATPAF2-201ENST00000444058 LRRC9Q6ZRR7 1453 aa29.79■■■□□ 2.36
ATPAF2-201ENST00000444058 ABCA6Q8N139 1617 aa29.77■■■□□ 2.36
ATPAF2-201ENST00000444058 KIDINS220Q9ULH0 1771 aa29.76■■■□□ 2.35
ATPAF2-201ENST00000444058 SPAG9O60271 1321 aaKnown RBP29.75■■■□□ 2.35
ATPAF2-201ENST00000444058 MLECQ14165 292 aa29.74■■■□□ 2.35
ATPAF2-201ENST00000444058 AGLP35573 1532 aa29.74■■■□□ 2.35
ATPAF2-201ENST00000444058 RIMS1Q86UR5 1692 aaKnown RBP29.72■■■□□ 2.35
ATPAF2-201ENST00000444058 ZNF644Q9H582 1327 aaPredicted RBP29.71■■■□□ 2.35
ATPAF2-201ENST00000444058 MBD5Q9P267 1494 aa29.71■■■□□ 2.35
ATPAF2-201ENST00000444058 ATP7AQ04656 1500 aa29.67■■■□□ 2.34
ATPAF2-201ENST00000444058 KANK4Q5T7N3 995 aaPredicted RBP29.67■■■□□ 2.34
ATPAF2-201ENST00000444058 FER1L4A9Z1Z3 1794 aa29.67■■■□□ 2.34
ATPAF2-201ENST00000444058 INO80Q9ULG1 1556 aaPredicted RBP29.66■■■□□ 2.34
ATPAF2-201ENST00000444058 RSPH4AQ5TD94 716 aa29.66■■■□□ 2.34
ATPAF2-201ENST00000444058 APLP2Q06481 763 aa29.64■■■□□ 2.34
ATPAF2-201ENST00000444058 RTEL1-TNFRSF6BF6WH68 1400 aa29.62■■■□□ 2.33
ATPAF2-201ENST00000444058 CAMSAP2Q08AD1 1489 aa29.61■■■□□ 2.33
ATPAF2-201ENST00000444058 A2MP01023 1474 aa29.57■■■□□ 2.32
ATPAF2-201ENST00000444058 CCDC141Q6ZP82 1450 aa29.57■■■□□ 2.32
ATPAF2-201ENST00000444058 PLXNC1O60486 1568 aa29.56■■■□□ 2.32
ATPAF2-201ENST00000444058 MIA2Q96PC5 1412 aa29.56■■■□□ 2.32
ATPAF2-201ENST00000444058 MYOM3Q5VTT5 1437 aa29.55■■■□□ 2.32
ATPAF2-201ENST00000444058 ARHGEF5Q12774 1597 aa29.54■■■□□ 2.32
ATPAF2-201ENST00000444058 LMTK3Q96Q04 1460 aa29.54■■■□□ 2.32
ATPAF2-201ENST00000444058 ESF1Q9H501 851 aaKnown RBP29.52■■■□□ 2.32
ATPAF2-201ENST00000444058 CNTLNQ9NXG0 1405 aa29.52■■■□□ 2.32
ATPAF2-201ENST00000444058 ADGBQ8N7X0 1667 aa29.51■■■□□ 2.31
ATPAF2-201ENST00000444058 PLPPR3Q6T4P5 718 aa29.5■■■□□ 2.31
ATPAF2-201ENST00000444058 TSPY4P0CV99 314 aa29.48■■■□□ 2.31
ATPAF2-201ENST00000444058 TSPY10P0CW01 314 aa29.48■■■□□ 2.31
ATPAF2-201ENST00000444058 CEBPAP49715 358 aaPredicted RBP29.47■■■□□ 2.31
ATPAF2-201ENST00000444058 PPP6R1Q9UPN7 881 aa29.46■■■□□ 2.31
ATPAF2-201ENST00000444058 DHX29Q7Z478 1369 aaKnown RBP29.46■■■□□ 2.31
ATPAF2-201ENST00000444058 C3P01024 1663 aa29.39■■■□□ 2.3
ATPAF2-201ENST00000444058 SETD1BQ9UPS6 1966 aaKnown RBP29.38■■■□□ 2.29
ATPAF2-201ENST00000444058 MAST1Q9Y2H9 1570 aa29.38■■■□□ 2.29
ATPAF2-201ENST00000444058 MROH2AA6NES4 1674 aa29.37■■■□□ 2.29
ATPAF2-201ENST00000444058 GGT6Q6P531 493 aa29.37■■■□□ 2.29
ATPAF2-201ENST00000444058 PREX1Q8TCU6 1659 aa29.37■■■□□ 2.29
ATPAF2-201ENST00000444058 ZMYM3Q14202 1370 aa29.36■■■□□ 2.29
ATPAF2-201ENST00000444058 HSPA2P54652 639 aa29.33■■■□□ 2.29
ATPAF2-201ENST00000444058 NPATQ14207 1427 aa29.33■■■□□ 2.29
ATPAF2-201ENST00000444058 UHRF1BP1Q6BDS2 1440 aa29.33■■■□□ 2.29
ATPAF2-201ENST00000444058 FGD6Q6ZV73 1430 aa29.33■■■□□ 2.29
ATPAF2-201ENST00000444058 KIF3BO15066 747 aa29.31■■■□□ 2.28
ATPAF2-201ENST00000444058 PTPN23Q9H3S7 1636 aa29.31■■■□□ 2.28
ATPAF2-201ENST00000444058 TCOF1Q13428 1488 aaKnown RBP29.3■■■□□ 2.28
ATPAF2-201ENST00000444058 FAM135AQ9P2D6 1515 aa29.29■■■□□ 2.28
ATPAF2-201ENST00000444058 CLTCQ00610 1675 aaKnown RBP29.28■■■□□ 2.28
ATPAF2-201ENST00000444058 SHANK2Q9UPX8 1470 aa29.27■■■□□ 2.28
ATPAF2-201ENST00000444058 ABCC5O15440 1437 aa29.26■■■□□ 2.27
ATPAF2-201ENST00000444058 DAPK1P53355 1430 aa29.21■■■□□ 2.27
ATPAF2-201ENST00000444058 PTPRKQ15262 1439 aa29.21■■■□□ 2.27
ATPAF2-201ENST00000444058 DNMT1P26358 1616 aaKnown RBP29.2■■■□□ 2.27
ATPAF2-201ENST00000444058 KDM5DQ9BY66 1539 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms