RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 TTC37Q6PGP7 1564 aa24.82■■□□□ 1.56
MRPL40-202ENST00000443660 DMRT2Q9Y5R5 561 aa24.82■■□□□ 1.56
MRPL40-202ENST00000443660 HECW1Q76N89 1606 aa24.82■■□□□ 1.56
MRPL40-202ENST00000443660 ATP10AO60312 1499 aa24.81■■□□□ 1.56
MRPL40-202ENST00000443660 CDK11AQ9UQ88 783 aaPredicted RBP24.8■■□□□ 1.56
MRPL40-202ENST00000443660 CEBPAP49715 358 aaPredicted RBP24.78■■□□□ 1.56
MRPL40-202ENST00000443660 MYT1LQ9UL68 1186 aa24.76■■□□□ 1.55
MRPL40-202ENST00000443660 C9orf84Q5VXU9 1444 aa24.76■■□□□ 1.55
MRPL40-202ENST00000443660 CDK13Q14004 1512 aaKnown RBP24.76■■□□□ 1.55
MRPL40-202ENST00000443660 SIGLEC1Q9BZZ2 1709 aa24.75■■□□□ 1.55
MRPL40-202ENST00000443660 FER1L4A9Z1Z3 1794 aa24.73■■□□□ 1.55
MRPL40-202ENST00000443660 ARHGEF12Q9NZN5 1544 aa24.72■■□□□ 1.55
MRPL40-202ENST00000443660 UBTFP17480 764 aaKnown RBP24.69■■□□□ 1.54
MRPL40-202ENST00000443660 AFAP1Q8N556 730 aa24.69■■□□□ 1.54
MRPL40-202ENST00000443660 DISP3Q9P2K9 1392 aa24.68■■□□□ 1.54
MRPL40-202ENST00000443660 FMN1Q68DA7 1419 aa24.67■■□□□ 1.54
MRPL40-202ENST00000443660 ESF1Q9H501 851 aaKnown RBP24.66■■□□□ 1.54
MRPL40-202ENST00000443660 UHRF1BP1Q6BDS2 1440 aa24.66■■□□□ 1.54
MRPL40-202ENST00000443660 ZNF518AQ6AHZ1 1483 aa24.65■■□□□ 1.54
MRPL40-202ENST00000443660 PREX1Q8TCU6 1659 aa24.65■■□□□ 1.54
MRPL40-202ENST00000443660 EHMT2Q96KQ7 1210 aa24.64■■□□□ 1.54
MRPL40-202ENST00000443660 ARHGAP5Q13017 1502 aa24.6■■□□□ 1.53
MRPL40-202ENST00000443660 CLIP1P30622 1438 aa24.6■■□□□ 1.53
MRPL40-202ENST00000443660 MYO5CQ9NQX4 1742 aa24.59■■□□□ 1.53
MRPL40-202ENST00000443660 SOCS7O14512 581 aa24.59■■□□□ 1.53
MRPL40-202ENST00000443660 ILDR2Q71H61 639 aa24.59■■□□□ 1.53
MRPL40-202ENST00000443660 TROQ12816 1431 aaPredicted RBP24.58■■□□□ 1.53
MRPL40-202ENST00000443660 PTPRTO14522 1441 aa24.55■■□□□ 1.52
MRPL40-202ENST00000443660 KIF14Q15058 1648 aa24.54■■□□□ 1.52
MRPL40-202ENST00000443660 KDM5CP41229 1560 aa24.53■■□□□ 1.52
MRPL40-202ENST00000443660 STRCQ7RTU9 1775 aa24.52■■□□□ 1.52
MRPL40-202ENST00000443660 ARHGAP35Q9NRY4 1499 aa24.51■■□□□ 1.51
MRPL40-202ENST00000443660 MLH3Q9UHC1 1453 aa24.51■■□□□ 1.51
MRPL40-202ENST00000443660 SETD1BQ9UPS6 1966 aaKnown RBP24.51■■□□□ 1.51
MRPL40-202ENST00000443660 TRAPPC8Q9Y2L5 1435 aa24.51■■□□□ 1.51
MRPL40-202ENST00000443660 DIP2CQ9Y2E4 1556 aa24.49■■□□□ 1.51
MRPL40-202ENST00000443660 REREQ9P2R6 1566 aa24.48■■□□□ 1.51
MRPL40-202ENST00000443660 AGLP35573 1532 aa24.45■■□□□ 1.5
MRPL40-202ENST00000443660 CNTLNQ9NXG0 1405 aa24.44■■□□□ 1.5
MRPL40-202ENST00000443660 C3P01024 1663 aa24.41■■□□□ 1.5
MRPL40-202ENST00000443660 ABCA6Q8N139 1617 aa24.4■■□□□ 1.5
MRPL40-202ENST00000443660 NCOA1Q15788 1441 aa24.38■■□□□ 1.49
MRPL40-202ENST00000443660 ZNF777Q9ULD5 760 aaPredicted RBP24.38■■□□□ 1.49
MRPL40-202ENST00000443660 IQSEC2Q5JU85 1478 aa24.38■■□□□ 1.49
MRPL40-202ENST00000443660 LTBP4Q8N2S1 1624 aa24.36■■□□□ 1.49
MRPL40-202ENST00000443660 CDC42BPBQ9Y5S2 1711 aa24.36■■□□□ 1.49
MRPL40-202ENST00000443660 ABCC1P33527 1531 aa24.35■■□□□ 1.49
MRPL40-202ENST00000443660 SPATA31D1Q6ZQQ2 1576 aa24.35■■□□□ 1.49
MRPL40-202ENST00000443660 ZMYM3Q14202 1370 aa24.35■■□□□ 1.49
MRPL40-202ENST00000443660 NPATQ14207 1427 aa24.34■■□□□ 1.49
MRPL40-202ENST00000443660 SPAG9O60271 1321 aaKnown RBP24.34■■□□□ 1.49
MRPL40-202ENST00000443660 CCDC18Q5T9S5 1454 aa24.33■■□□□ 1.49
MRPL40-202ENST00000443660 NCKAP5LQ9HCH0 1330 aa24.33■■□□□ 1.48
MRPL40-202ENST00000443660 PREX2Q70Z35 1606 aa24.32■■□□□ 1.48
MRPL40-202ENST00000443660 CASKIN1Q8WXD9 1431 aa24.32■■□□□ 1.48
MRPL40-202ENST00000443660 UBAP1LF5GYI3 381 aa24.31■■□□□ 1.48
MRPL40-202ENST00000443660 CAMSAP1Q5T5Y3 1602 aa24.29■■□□□ 1.48
MRPL40-202ENST00000443660 HNRNPMP52272 730 aaKnown RBP eCLIP24.29■■□□□ 1.48
MRPL40-202ENST00000443660 ITSN2Q9NZM3 1697 aa24.28■■□□□ 1.48
MRPL40-202ENST00000443660 PKD2Q13563 968 aa24.28■■□□□ 1.48
MRPL40-202ENST00000443660 KIDINS220Q9ULH0 1771 aa24.28■■□□□ 1.48
MRPL40-202ENST00000443660 ZNF335Q9H4Z2 1342 aaPredicted RBP24.27■■□□□ 1.48
MRPL40-202ENST00000443660 LRRIQ1Q96JM4 1722 aa24.27■■□□□ 1.48
MRPL40-202ENST00000443660 GGT6Q6P531 493 aa24.24■■□□□ 1.47
MRPL40-202ENST00000443660 SAMD9LQ8IVG5 1584 aa24.24■■□□□ 1.47
MRPL40-202ENST00000443660 CFDP1Q9UEE9 299 aaPredicted RBP24.23■■□□□ 1.47
MRPL40-202ENST00000443660 CHIC1Q5VXU3 224 aa24.21■■□□□ 1.47
MRPL40-202ENST00000443660 MROH2AA6NES4 1674 aa24.21■■□□□ 1.47
MRPL40-202ENST00000443660 PPP6R1Q9UPN7 881 aa24.2■■□□□ 1.46
MRPL40-202ENST00000443660 GPATCH8Q9UKJ3 1502 aaKnown RBP24.2■■□□□ 1.46
MRPL40-202ENST00000443660 KIAA1107Q9UPP5 1409 aa24.18■■□□□ 1.46
MRPL40-202ENST00000443660 SYCP2Q9BX26 1530 aa24.18■■□□□ 1.46
MRPL40-202ENST00000443660 PLA2R1Q13018 1463 aa24.18■■□□□ 1.46
MRPL40-202ENST00000443660 CDC42BPAQ5VT25 1732 aa24.18■■□□□ 1.46
MRPL40-202ENST00000443660 A2MP01023 1474 aa24.17■■□□□ 1.46
MRPL40-202ENST00000443660 PLEKHH2Q8IVE3 1493 aa24.17■■□□□ 1.46
MRPL40-202ENST00000443660 PTPRKQ15262 1439 aa24.16■■□□□ 1.46
MRPL40-202ENST00000443660 FYCO1Q9BQS8 1478 aa24.15■■□□□ 1.46
MRPL40-202ENST00000443660 SUPT6HQ7KZ85 1726 aaKnown RBP24.15■■□□□ 1.46
MRPL40-202ENST00000443660 CCNB3Q8WWL7 1395 aa24.15■■□□□ 1.46
MRPL40-202ENST00000443660 ATP7AQ04656 1500 aa24.15■■□□□ 1.46
MRPL40-202ENST00000443660 TCOF1Q13428 1488 aaKnown RBP24.12■■□□□ 1.45
MRPL40-202ENST00000443660 CLTCQ00610 1675 aaKnown RBP24.11■■□□□ 1.45
MRPL40-202ENST00000443660 SCAF1Q9H7N4 1312 aaKnown RBP24.1■■□□□ 1.45
MRPL40-202ENST00000443660 CEP170BQ9Y4F5 1589 aaPredicted RBP24.1■■□□□ 1.45
MRPL40-202ENST00000443660 MYO3AQ8NEV4 1616 aa24.09■■□□□ 1.45
MRPL40-202ENST00000443660 TOM1O60784 492 aa24.08■■□□□ 1.45
MRPL40-202ENST00000443660 PLXNC1O60486 1568 aa24.08■■□□□ 1.44
MRPL40-202ENST00000443660 PIP4K2BP78356 416 aa24.07■■□□□ 1.44
MRPL40-202ENST00000443660 MTUS2Q5JR59 1369 aa24.06■■□□□ 1.44
MRPL40-202ENST00000443660 ZNF142P52746 1687 aaPredicted RBP24.05■■□□□ 1.44
MRPL40-202ENST00000443660 INO80Q9ULG1 1556 aaPredicted RBP24.04■■□□□ 1.44
MRPL40-202ENST00000443660 HSPA1LP34931 641 aa24.04■■□□□ 1.44
MRPL40-202ENST00000443660 A2ML1A8K2U0 1454 aa24.04■■□□□ 1.44
MRPL40-202ENST00000443660 ZNF644Q9H582 1327 aaPredicted RBP24.03■■□□□ 1.44
MRPL40-202ENST00000443660 FBXO31Q5XUX0 539 aaPredicted RBP24■■□□□ 1.43
MRPL40-202ENST00000443660 ANKLE2Q86XL3 938 aa24■■□□□ 1.43
MRPL40-202ENST00000443660 DHX29Q7Z478 1369 aaKnown RBP24■■□□□ 1.43
MRPL40-202ENST00000443660 KIF3BO15066 747 aa23.99■■□□□ 1.43
MRPL40-202ENST00000443660 TNRQ92752 1358 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms