RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 CAMK2BQ13554 666 aa9.48□□□□□ -0.89
TM9SF3-202ENST00000443638 TRIM66O15016 1216 aa9.46□□□□□ -0.9
TM9SF3-202ENST00000443638 CRISPLD2Q9H0B8 497 aa9.46□□□□□ -0.9
TM9SF3-202ENST00000443638 SOX12O15370 315 aa9.45□□□□□ -0.9
TM9SF3-202ENST00000443638 RBM26Q5T8P6 1007 aaKnown RBP9.45□□□□□ -0.9
TM9SF3-202ENST00000443638 NPM2Q86SE8 214 aaKnown RBP9.45□□□□□ -0.9
TM9SF3-202ENST00000443638 LARP6Q9BRS8 491 aaKnown RBP9.45□□□□□ -0.9
TM9SF3-202ENST00000443638 PDE4DQ08499 809 aa9.44□□□□□ -0.9
TM9SF3-202ENST00000443638 MKRN3Q13064 507 aaKnown RBP9.44□□□□□ -0.9
TM9SF3-202ENST00000443638 GPIHBP1Q8IV16 184 aa9.44□□□□□ -0.9
TM9SF3-202ENST00000443638 PDE4AP27815 886 aa9.43□□□□□ -0.9
TM9SF3-202ENST00000443638 EFCAB3Q8N7B9 438 aa9.43□□□□□ -0.9
TM9SF3-202ENST00000443638 PHF8Q9UPP1 1060 aa9.43□□□□□ -0.9
TM9SF3-202ENST00000443638 MLLT3P42568 568 aaPredicted RBP9.41□□□□□ -0.9
TM9SF3-202ENST00000443638 TSPYL2Q9H2G4 693 aaPredicted RBP9.41□□□□□ -0.9
TM9SF3-202ENST00000443638 KRI1Q8N9T8 703 aaKnown RBP9.4□□□□□ -0.9
TM9SF3-202ENST00000443638 OTUD5Q96G74 571 aa9.4□□□□□ -0.9
TM9SF3-202ENST00000443638 CCDC61Q9Y6R9 512 aa9.4□□□□□ -0.9
TM9SF3-202ENST00000443638 DDX27Q96GQ7 796 aaKnown RBP9.39□□□□□ -0.91
TM9SF3-202ENST00000443638 ARID3AQ99856 593 aa9.39□□□□□ -0.91
TM9SF3-202ENST00000443638 POTEB2H3BUK9 544 aa9.38□□□□□ -0.91
TM9SF3-202ENST00000443638 ASTLQ6HA08 431 aaPredicted RBP9.38□□□□□ -0.91
TM9SF3-202ENST00000443638 PELP1Q8IZL8 1130 aaKnown RBP9.37□□□□□ -0.91
TM9SF3-202ENST00000443638 MS4A3Q96HJ5 214 aa9.37□□□□□ -0.91
TM9SF3-202ENST00000443638 FAM117AQ9C073 453 aa9.37□□□□□ -0.91
TM9SF3-202ENST00000443638 PLEKHG3A1L390 1219 aa9.36□□□□□ -0.91
TM9SF3-202ENST00000443638 GPR37O15354 613 aa9.36□□□□□ -0.91
TM9SF3-202ENST00000443638 MS4A4AQ96JQ5 239 aa9.36□□□□□ -0.91
TM9SF3-202ENST00000443638 CABP2Q9NPB3 220 aa9.35□□□□□ -0.91
TM9SF3-202ENST00000443638 ARID3CA6NKF2 412 aa9.34□□□□□ -0.91
TM9SF3-202ENST00000443638 ATMINO43313 823 aaPredicted RBP9.34□□□□□ -0.91
TM9SF3-202ENST00000443638 ONECUT3O60422 494 aaPredicted RBP9.34□□□□□ -0.91
TM9SF3-202ENST00000443638 C7P10643 843 aa9.34□□□□□ -0.91
TM9SF3-202ENST00000443638 SLC39A7Q92504 469 aa9.34□□□□□ -0.91
TM9SF3-202ENST00000443638 APBB1O00213 710 aa9.33□□□□□ -0.92
TM9SF3-202ENST00000443638 FLIIQ13045 1269 aa9.33□□□□□ -0.92
TM9SF3-202ENST00000443638 IFNL1Q8IU54 200 aa9.33□□□□□ -0.92
TM9SF3-202ENST00000443638 METRNQ9UJH8 293 aa9.32□□□□□ -0.92
TM9SF3-202ENST00000443638 ZNF316A6NFI3 1004 aaPredicted RBP9.31□□□□□ -0.92
TM9SF3-202ENST00000443638 KIF12Q96FN5 646 aa9.29□□□□□ -0.92
TM9SF3-202ENST00000443638 DDRGK1Q96HY6 314 aa9.29□□□□□ -0.92
TM9SF3-202ENST00000443638 A6NJR5 290 aa9.28□□□□□ -0.92
TM9SF3-202ENST00000443638 NECTIN2Q92692 538 aa9.28□□□□□ -0.92
TM9SF3-202ENST00000443638 PDIA4P13667 645 aaKnown RBP9.27□□□□□ -0.93
TM9SF3-202ENST00000443638 AMHR2Q16671 573 aa9.27□□□□□ -0.93
TM9SF3-202ENST00000443638 MAMSTRQ6ZN01 415 aa9.27□□□□□ -0.93
TM9SF3-202ENST00000443638 GOPCQ9HD26 462 aa9.27□□□□□ -0.93
TM9SF3-202ENST00000443638 PDIA6Q15084 440 aa9.26□□□□□ -0.93
TM9SF3-202ENST00000443638 MINK1Q8N4C8 1332 aaPredicted RBP9.26□□□□□ -0.93
TM9SF3-202ENST00000443638 ZBTB7CA1YPR0 619 aa9.25□□□□□ -0.93
TM9SF3-202ENST00000443638 PLSCR2Q9NRY7 297 aa9.25□□□□□ -0.93
TM9SF3-202ENST00000443638 CCDC9Q9Y3X0 531 aaKnown RBP9.25□□□□□ -0.93
TM9SF3-202ENST00000443638 SPDYE16A6NNV3 312 aaPredicted RBP9.24□□□□□ -0.93
TM9SF3-202ENST00000443638 ATN1P54259 1190 aaPredicted RBP9.24□□□□□ -0.93
TM9SF3-202ENST00000443638 PARP9Q8IXQ6 854 aa9.24□□□□□ -0.93
TM9SF3-202ENST00000443638 EMILIN3Q9NT22 766 aa9.24□□□□□ -0.93
TM9SF3-202ENST00000443638 MAP3K13O43283 966 aa9.23□□□□□ -0.93
TM9SF3-202ENST00000443638 TRAK2O60296 914 aa9.23□□□□□ -0.93
TM9SF3-202ENST00000443638 MAP2K5Q13163 448 aa9.23□□□□□ -0.93
TM9SF3-202ENST00000443638 PPP1R15BQ5SWA1 713 aa9.23□□□□□ -0.93
TM9SF3-202ENST00000443638 CCDC82Q8N4S0 544 aa9.23□□□□□ -0.93
TM9SF3-202ENST00000443638 POTEJP0CG39 1038 aa9.22□□□□□ -0.93
TM9SF3-202ENST00000443638 CCDC102AQ96A19 550 aa9.22□□□□□ -0.93
TM9SF3-202ENST00000443638 POTEMA6NI47 508 aa9.21□□□□□ -0.94
TM9SF3-202ENST00000443638 DPYSL4O14531 572 aa9.21□□□□□ -0.94
TM9SF3-202ENST00000443638 TIE1P35590 1138 aa9.21□□□□□ -0.94
TM9SF3-202ENST00000443638 GPHNQ9NQX3 736 aaPredicted RBP9.21□□□□□ -0.94
TM9SF3-202ENST00000443638 BMP2KQ9NSY1 1161 aaPredicted RBP9.21□□□□□ -0.94
TM9SF3-202ENST00000443638 IRF6O14896 467 aa9.2□□□□□ -0.94
TM9SF3-202ENST00000443638 POTEGQ6S5H5 508 aa9.19□□□□□ -0.94
TM9SF3-202ENST00000443638 SCUBE2Q9NQ36 999 aa9.19□□□□□ -0.94
TM9SF3-202ENST00000443638 CLUAP1Q96AJ1 413 aa9.18□□□□□ -0.94
TM9SF3-202ENST00000443638 TRPC6Q9Y210 931 aa9.16□□□□□ -0.94
TM9SF3-202ENST00000443638 MCM6Q14566 821 aa9.15□□□□□ -0.94
TM9SF3-202ENST00000443638 TRAIPQ9BWF2 469 aa9.15□□□□□ -0.94
TM9SF3-202ENST00000443638 PCDH10Q9P2E7 1040 aa9.15□□□□□ -0.94
TM9SF3-202ENST00000443638 POTEFA5A3E0 1075 aa9.13□□□□□ -0.95
TM9SF3-202ENST00000443638 TTLL13PA6NNM8 815 aa9.13□□□□□ -0.95
TM9SF3-202ENST00000443638 ILDR1Q86SU0 546 aaPredicted RBP9.13□□□□□ -0.95
TM9SF3-202ENST00000443638 GNPATO15228 680 aa9.12□□□□□ -0.95
TM9SF3-202ENST00000443638 DSG2Q14126 1118 aa9.11□□□□□ -0.95
TM9SF3-202ENST00000443638 IER5LQ5T953 404 aa9.1□□□□□ -0.95
TM9SF3-202ENST00000443638 FNBP4Q8N3X1 1017 aaPredicted RBP9.1□□□□□ -0.95
TM9SF3-202ENST00000443638 PCMTD1Q96MG8 357 aaPredicted RBP9.1□□□□□ -0.95
TM9SF3-202ENST00000443638 SEC24BO95487 1268 aa9.09□□□□□ -0.95
TM9SF3-202ENST00000443638 MS4A1P11836 297 aa9.09□□□□□ -0.95
TM9SF3-202ENST00000443638 FECHP22830 423 aa9.09□□□□□ -0.95
TM9SF3-202ENST00000443638 HIC1Q14526 733 aa9.09□□□□□ -0.95
TM9SF3-202ENST00000443638 NUTM2FA1L443 756 aa9.08□□□□□ -0.96
TM9SF3-202ENST00000443638 OSBPP22059 807 aa9.08□□□□□ -0.96
TM9SF3-202ENST00000443638 SH3D19Q5HYK7 790 aa9.08□□□□□ -0.96
TM9SF3-202ENST00000443638 PROSER2Q86WR7 435 aaPredicted RBP9.08□□□□□ -0.96
TM9SF3-202ENST00000443638 OXER1Q8TDS5 423 aa9.08□□□□□ -0.96
TM9SF3-202ENST00000443638 LCE2DQ5TA82 110 aaPredicted RBP9.07□□□□□ -0.96
TM9SF3-202ENST00000443638 KCTD17Q8N5Z5 321 aa9.07□□□□□ -0.96
TM9SF3-202ENST00000443638 TRIM35Q9UPQ4 493 aa9.07□□□□□ -0.96
TM9SF3-202ENST00000443638 COLQQ9Y215 455 aaPredicted RBP9.07□□□□□ -0.96
TM9SF3-202ENST00000443638 FOXK1P85037 733 aa9.06□□□□□ -0.96
TM9SF3-202ENST00000443638 GIGYF2Q6Y7W6 1299 aaKnown RBP9.06□□□□□ -0.96
TM9SF3-202ENST00000443638 FAM163AQ96GL9 167 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms