RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 NCKAP5LQ9HCH0 1330 aa13.67□□□□□ -0.22
SSXP3-201ENST00000442971 BIVM-ERCC5R4GMW8 1640 aa13.66□□□□□ -0.22
SSXP3-201ENST00000442971 RICTORQ6R327 1708 aa13.66□□□□□ -0.22
SSXP3-201ENST00000442971 CAMSAP1Q5T5Y3 1602 aa13.65□□□□□ -0.22
SSXP3-201ENST00000442971 ABCA9Q8IUA7 1624 aa13.64□□□□□ -0.23
SSXP3-201ENST00000442971 IQGAP2Q13576 1575 aa13.64□□□□□ -0.23
SSXP3-201ENST00000442971 ZFYVE16Q7Z3T8 1539 aa13.64□□□□□ -0.23
SSXP3-201ENST00000442971 DENND4BO75064 1496 aaPredicted RBP13.63□□□□□ -0.23
SSXP3-201ENST00000442971 PTPRKQ15262 1439 aa13.62□□□□□ -0.23
SSXP3-201ENST00000442971 FHOD3Q2V2M9 1422 aa13.62□□□□□ -0.23
SSXP3-201ENST00000442971 EFCAB5A4FU69 1503 aa13.62□□□□□ -0.23
SSXP3-201ENST00000442971 ALKQ9UM73 1620 aa13.61□□□□□ -0.23
SSXP3-201ENST00000442971 ZMYM4Q5VZL5 1548 aa13.59□□□□□ -0.23
SSXP3-201ENST00000442971 TRAPPC8Q9Y2L5 1435 aa13.59□□□□□ -0.23
SSXP3-201ENST00000442971 C3P01024 1663 aa13.57□□□□□ -0.24
SSXP3-201ENST00000442971 CPS1P31327 1500 aa13.57□□□□□ -0.24
SSXP3-201ENST00000442971 PKD2Q13563 968 aa13.57□□□□□ -0.24
SSXP3-201ENST00000442971 MAGI2Q86UL8 1455 aa13.57□□□□□ -0.24
SSXP3-201ENST00000442971 IGF1RP08069 1367 aa13.56□□□□□ -0.24
SSXP3-201ENST00000442971 ABCA8O94911 1581 aa13.52□□□□□ -0.25
SSXP3-201ENST00000442971 UGGT2Q9NYU1 1516 aa13.51□□□□□ -0.25
SSXP3-201ENST00000442971 ATP10AO60312 1499 aa13.5□□□□□ -0.25
SSXP3-201ENST00000442971 PLA2R1Q13018 1463 aa13.49□□□□□ -0.25
SSXP3-201ENST00000442971 C9orf84Q5VXU9 1444 aa13.49□□□□□ -0.25
SSXP3-201ENST00000442971 RBM33Q96EV2 1170 aaKnown RBP13.49□□□□□ -0.25
SSXP3-201ENST00000442971 HECW1Q76N89 1606 aa13.48□□□□□ -0.25
SSXP3-201ENST00000442971 TCOF1Q13428 1488 aaKnown RBP13.48□□□□□ -0.25
SSXP3-201ENST00000442971 SHANK2Q9UPX8 1470 aa13.48□□□□□ -0.25
SSXP3-201ENST00000442971 POTEDQ86YR6 584 aa13.48□□□□□ -0.25
SSXP3-201ENST00000442971 TRIM52Q96A61 297 aa13.47□□□□□ -0.25
SSXP3-201ENST00000442971 RAPGEF2Q9Y4G8 1499 aa13.47□□□□□ -0.25
SSXP3-201ENST00000442971 ZRANB1Q9UGI0 708 aa13.45□□□□□ -0.26
SSXP3-201ENST00000442971 ARID3CA6NKF2 412 aa13.44□□□□□ -0.26
SSXP3-201ENST00000442971 SETBP1Q9Y6X0 1596 aa13.44□□□□□ -0.26
SSXP3-201ENST00000442971 ESF1Q9H501 851 aaKnown RBP13.43□□□□□ -0.26
SSXP3-201ENST00000442971 CARMIL1Q5VZK9 1371 aa13.43□□□□□ -0.26
SSXP3-201ENST00000442971 SUPT6HQ7KZ85 1726 aaKnown RBP13.42□□□□□ -0.26
SSXP3-201ENST00000442971 ATP10BO94823 1461 aa13.42□□□□□ -0.26
SSXP3-201ENST00000442971 CFAP74Q9C0B2 1584 aa13.41□□□□□ -0.26
SSXP3-201ENST00000442971 NPATQ14207 1427 aa13.39□□□□□ -0.27
SSXP3-201ENST00000442971 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
SSXP3-201ENST00000442971 ZNF142P52746 1687 aaPredicted RBP13.36□□□□□ -0.27
SSXP3-201ENST00000442971 RNF17Q9BXT8 1623 aaKnown RBP13.36□□□□□ -0.27
SSXP3-201ENST00000442971 KIF27Q86VH2 1401 aa13.35□□□□□ -0.27
SSXP3-201ENST00000442971 VWDEQ8N2E2 1590 aa13.33□□□□□ -0.28
SSXP3-201ENST00000442971 CEP170BQ9Y4F5 1589 aaPredicted RBP13.32□□□□□ -0.28
SSXP3-201ENST00000442971 CNTLNQ9NXG0 1405 aa13.32□□□□□ -0.28
SSXP3-201ENST00000442971 RXRBP28702 533 aa13.32□□□□□ -0.28
SSXP3-201ENST00000442971 ZNF772Q68DY9 489 aaPredicted RBP13.32□□□□□ -0.28
SSXP3-201ENST00000442971 MYO3AQ8NEV4 1616 aa13.31□□□□□ -0.28
SSXP3-201ENST00000442971 SCAPERQ9BY12 1400 aa13.31□□□□□ -0.28
SSXP3-201ENST00000442971 AGLP35573 1532 aa13.3□□□□□ -0.28
SSXP3-201ENST00000442971 CDK12Q9NYV4 1490 aaPredicted RBP13.29□□□□□ -0.28
SSXP3-201ENST00000442971 GOLGA3Q08378 1498 aa13.28□□□□□ -0.28
SSXP3-201ENST00000442971 NEURL4Q96JN8 1562 aa13.27□□□□□ -0.28
SSXP3-201ENST00000442971 POLR1AO95602 1720 aaPredicted RBP13.27□□□□□ -0.28
SSXP3-201ENST00000442971 YY1P25490 414 aa13.27□□□□□ -0.29
SSXP3-201ENST00000442971 FAM135BQ49AJ0 1406 aa13.27□□□□□ -0.29
SSXP3-201ENST00000442971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.26□□□□□ -0.29
SSXP3-201ENST00000442971 HNRNPUL2Q1KMD3 747 aaKnown RBP13.26□□□□□ -0.29
SSXP3-201ENST00000442971 MROH2AA6NES4 1674 aa13.25□□□□□ -0.29
SSXP3-201ENST00000442971 ZMYM3Q14202 1370 aa13.25□□□□□ -0.29
SSXP3-201ENST00000442971 REREQ9P2R6 1566 aa13.24□□□□□ -0.29
SSXP3-201ENST00000442971 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.24□□□□□ -0.29
SSXP3-201ENST00000442971 LRP5O75197 1615 aa13.23□□□□□ -0.29
SSXP3-201ENST00000442971 STRCP1A6NGW2 1772 aa13.22□□□□□ -0.29
SSXP3-201ENST00000442971 FAM9AQ8IZU1 332 aaPredicted RBP13.22□□□□□ -0.29
SSXP3-201ENST00000442971 SYNMO15061 1565 aa13.22□□□□□ -0.29
SSXP3-201ENST00000442971 RAPGEF6Q8TEU7 1601 aa13.21□□□□□ -0.29
SSXP3-201ENST00000442971 SENP3-EIF4A1A0A087X0R7 540 aa13.21□□□□□ -0.29
SSXP3-201ENST00000442971 DIP2CQ9Y2E4 1556 aa13.21□□□□□ -0.29
SSXP3-201ENST00000442971 MYT1LQ9UL68 1186 aa13.2□□□□□ -0.3
SSXP3-201ENST00000442971 DNMT1P26358 1616 aaKnown RBP13.2□□□□□ -0.3
SSXP3-201ENST00000442971 NUTM2BA6NNL0 878 aaPredicted RBP13.19□□□□□ -0.3
SSXP3-201ENST00000442971 NUTM2EB1AL46 878 aaPredicted RBP13.19□□□□□ -0.3
SSXP3-201ENST00000442971 MEX3CQ5U5Q3 659 aaKnown RBP13.19□□□□□ -0.3
SSXP3-201ENST00000442971 NUTM2DQ5VT03 806 aaPredicted RBP13.19□□□□□ -0.3
SSXP3-201ENST00000442971 NUTM2AQ8IVF1 878 aaPredicted RBP13.19□□□□□ -0.3
SSXP3-201ENST00000442971 JCADQ9P266 1359 aa13.18□□□□□ -0.3
SSXP3-201ENST00000442971 A2ML1A8K2U0 1454 aa13.18□□□□□ -0.3
SSXP3-201ENST00000442971 CDK13Q14004 1512 aaKnown RBP13.17□□□□□ -0.3
SSXP3-201ENST00000442971 ANKLE2Q86XL3 938 aa13.15□□□□□ -0.3
SSXP3-201ENST00000442971 LRP6O75581 1613 aa13.15□□□□□ -0.3
SSXP3-201ENST00000442971 ZNF518AQ6AHZ1 1483 aa13.15□□□□□ -0.3
SSXP3-201ENST00000442971 RGS12O14924 1447 aa13.15□□□□□ -0.3
SSXP3-201ENST00000442971 ROBO1Q9Y6N7 1651 aa13.14□□□□□ -0.31
SSXP3-201ENST00000442971 NPHP4O75161 1426 aaPredicted RBP13.14□□□□□ -0.31
SSXP3-201ENST00000442971 ABCA6Q8N139 1617 aa13.14□□□□□ -0.31
SSXP3-201ENST00000442971 PLEKHD1A6NEE1 506 aa13.13□□□□□ -0.31
SSXP3-201ENST00000442971 AFAP1Q8N556 730 aa13.13□□□□□ -0.31
SSXP3-201ENST00000442971 ATAD2Q6PL18 1390 aa13.13□□□□□ -0.31
SSXP3-201ENST00000442971 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.13□□□□□ -0.31
SSXP3-201ENST00000442971 KDM5CP41229 1560 aa13.13□□□□□ -0.31
SSXP3-201ENST00000442971 MED14O60244 1454 aa13.12□□□□□ -0.31
SSXP3-201ENST00000442971 PLCH2O75038 1416 aa13.1□□□□□ -0.31
SSXP3-201ENST00000442971 XIRP1Q702N8 1843 aaKnown RBP13.1□□□□□ -0.31
SSXP3-201ENST00000442971 SPATA31A6Q5VVP1 1343 aa13.1□□□□□ -0.31
SSXP3-201ENST00000442971 PHLPP1O60346 1717 aa13.09□□□□□ -0.31
SSXP3-201ENST00000442971 CLTCQ00610 1675 aaKnown RBP13.09□□□□□ -0.31
SSXP3-201ENST00000442971 CTTNBP2Q8WZ74 1663 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms