RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 EFCAB2Q5VUJ9 269 aa22.67■■□□□ 1.22
PTPRE-203ENST00000442830 ATP1B4Q9UN42 357 aaPredicted RBP22.67■■□□□ 1.22
PTPRE-203ENST00000442830 TROQ12816 1431 aaPredicted RBP22.66■■□□□ 1.22
PTPRE-203ENST00000442830 SCAPERQ9BY12 1400 aa22.66■■□□□ 1.22
PTPRE-203ENST00000442830 PCF11O94913 1555 aaKnown RBP22.66■■□□□ 1.22
PTPRE-203ENST00000442830 CCDC18Q5T9S5 1454 aa22.63■■□□□ 1.21
PTPRE-203ENST00000442830 ZNF518AQ6AHZ1 1483 aa22.62■■□□□ 1.21
PTPRE-203ENST00000442830 YEATS2Q9ULM3 1422 aa22.61■■□□□ 1.21
PTPRE-203ENST00000442830 FER1L4A9Z1Z3 1794 aa22.61■■□□□ 1.21
PTPRE-203ENST00000442830 EHMT2Q96KQ7 1210 aa22.6■■□□□ 1.21
PTPRE-203ENST00000442830 ARHGAP5Q13017 1502 aa22.6■■□□□ 1.21
PTPRE-203ENST00000442830 C9orf84Q5VXU9 1444 aa22.59■■□□□ 1.21
PTPRE-203ENST00000442830 LRRIQ1Q96JM4 1722 aa22.59■■□□□ 1.21
PTPRE-203ENST00000442830 ATP10AO60312 1499 aa22.59■■□□□ 1.21
PTPRE-203ENST00000442830 LMTK3Q96Q04 1460 aa22.58■■□□□ 1.2
PTPRE-203ENST00000442830 CASKIN1Q8WXD9 1431 aa22.57■■□□□ 1.2
PTPRE-203ENST00000442830 KDM5CP41229 1560 aa22.56■■□□□ 1.2
PTPRE-203ENST00000442830 SIGLEC1Q9BZZ2 1709 aa22.54■■□□□ 1.2
PTPRE-203ENST00000442830 PREX2Q70Z35 1606 aa22.53■■□□□ 1.2
PTPRE-203ENST00000442830 CDC42BPBQ9Y5S2 1711 aa22.53■■□□□ 1.2
PTPRE-203ENST00000442830 FYCO1Q9BQS8 1478 aa22.53■■□□□ 1.2
PTPRE-203ENST00000442830 ARHGEF12Q9NZN5 1544 aa22.52■■□□□ 1.2
PTPRE-203ENST00000442830 REREQ9P2R6 1566 aa22.51■■□□□ 1.19
PTPRE-203ENST00000442830 MLH3Q9UHC1 1453 aa22.47■■□□□ 1.19
PTPRE-203ENST00000442830 ABCC1P33527 1531 aa22.47■■□□□ 1.19
PTPRE-203ENST00000442830 FBXO41Q8TF61 875 aa22.46■■□□□ 1.19
PTPRE-203ENST00000442830 ITSN2Q9NZM3 1697 aa22.46■■□□□ 1.19
PTPRE-203ENST00000442830 MLECQ14165 292 aa22.45■■□□□ 1.18
PTPRE-203ENST00000442830 PREX1Q8TCU6 1659 aa22.45■■□□□ 1.18
PTPRE-203ENST00000442830 CDC42BPAQ5VT25 1732 aa22.44■■□□□ 1.18
PTPRE-203ENST00000442830 SETD1BQ9UPS6 1966 aaKnown RBP22.44■■□□□ 1.18
PTPRE-203ENST00000442830 DIP2CQ9Y2E4 1556 aa22.44■■□□□ 1.18
PTPRE-203ENST00000442830 MYT1LQ9UL68 1186 aa22.43■■□□□ 1.18
PTPRE-203ENST00000442830 AFAP1Q8N556 730 aa22.41■■□□□ 1.18
PTPRE-203ENST00000442830 AGLP35573 1532 aa22.41■■□□□ 1.18
PTPRE-203ENST00000442830 ABCA6Q8N139 1617 aa22.4■■□□□ 1.18
PTPRE-203ENST00000442830 PLPPR3Q6T4P5 718 aa22.37■■□□□ 1.17
PTPRE-203ENST00000442830 PLEKHH2Q8IVE3 1493 aa22.34■■□□□ 1.17
PTPRE-203ENST00000442830 TRAPPC8Q9Y2L5 1435 aa22.34■■□□□ 1.17
PTPRE-203ENST00000442830 KIDINS220Q9ULH0 1771 aa22.34■■□□□ 1.17
PTPRE-203ENST00000442830 HSPA2P54652 639 aa22.33■■□□□ 1.17
PTPRE-203ENST00000442830 ESF1Q9H501 851 aaKnown RBP22.33■■□□□ 1.17
PTPRE-203ENST00000442830 UHRF1BP1Q6BDS2 1440 aa22.32■■□□□ 1.16
PTPRE-203ENST00000442830 CNTLNQ9NXG0 1405 aa22.32■■□□□ 1.16
PTPRE-203ENST00000442830 SAMD9LQ8IVG5 1584 aa22.3■■□□□ 1.16
PTPRE-203ENST00000442830 DMRT2Q9Y5R5 561 aa22.29■■□□□ 1.16
PTPRE-203ENST00000442830 GPATCH8Q9UKJ3 1502 aaKnown RBP22.29■■□□□ 1.16
PTPRE-203ENST00000442830 KIAA1107Q9UPP5 1409 aa22.29■■□□□ 1.16
PTPRE-203ENST00000442830 C3P01024 1663 aa22.29■■□□□ 1.16
PTPRE-203ENST00000442830 SYCP2Q9BX26 1530 aa22.28■■□□□ 1.16
PTPRE-203ENST00000442830 MTUS2Q5JR59 1369 aa22.27■■□□□ 1.16
PTPRE-203ENST00000442830 MROH2AA6NES4 1674 aa22.26■■□□□ 1.15
PTPRE-203ENST00000442830 CCNB3Q8WWL7 1395 aa22.25■■□□□ 1.15
PTPRE-203ENST00000442830 ZNF777Q9ULD5 760 aaPredicted RBP22.24■■□□□ 1.15
PTPRE-203ENST00000442830 SPAG9O60271 1321 aaKnown RBP22.24■■□□□ 1.15
PTPRE-203ENST00000442830 ATP7AQ04656 1500 aa22.23■■□□□ 1.15
PTPRE-203ENST00000442830 EHBP1L1Q8N3D4 1523 aa22.23■■□□□ 1.15
PTPRE-203ENST00000442830 CEBPAP49715 358 aaPredicted RBP22.23■■□□□ 1.15
PTPRE-203ENST00000442830 CFDP1Q9UEE9 299 aaPredicted RBP22.23■■□□□ 1.15
PTPRE-203ENST00000442830 INO80Q9ULG1 1556 aaPredicted RBP22.21■■□□□ 1.15
PTPRE-203ENST00000442830 STRCQ7RTU9 1775 aa22.2■■□□□ 1.14
PTPRE-203ENST00000442830 NPATQ14207 1427 aa22.19■■□□□ 1.14
PTPRE-203ENST00000442830 SUPT6HQ7KZ85 1726 aaKnown RBP22.18■■□□□ 1.14
PTPRE-203ENST00000442830 ADGBQ8N7X0 1667 aa22.18■■□□□ 1.14
PTPRE-203ENST00000442830 PLXNC1O60486 1568 aa22.18■■□□□ 1.14
PTPRE-203ENST00000442830 CERKQ8TCT0 537 aa22.18■■□□□ 1.14
PTPRE-203ENST00000442830 TIAM1Q13009 1591 aa22.16■■□□□ 1.14
PTPRE-203ENST00000442830 A2MP01023 1474 aa22.15■■□□□ 1.14
PTPRE-203ENST00000442830 PTPRTO14522 1441 aa22.15■■□□□ 1.14
PTPRE-203ENST00000442830 CEP162Q5TB80 1403 aa22.15■■□□□ 1.14
PTPRE-203ENST00000442830 HNRNPMP52272 730 aaKnown RBP eCLIP22.15■■□□□ 1.14
PTPRE-203ENST00000442830 PPP6R1Q9UPN7 881 aa22.13■■□□□ 1.13
PTPRE-203ENST00000442830 RTEL1-TNFRSF6BF6WH68 1400 aa22.11■■□□□ 1.13
PTPRE-203ENST00000442830 CLTCQ00610 1675 aaKnown RBP22.09■■□□□ 1.13
PTPRE-203ENST00000442830 ZMYM3Q14202 1370 aa22.09■■□□□ 1.13
PTPRE-203ENST00000442830 ZNF142P52746 1687 aaPredicted RBP22.07■■□□□ 1.12
PTPRE-203ENST00000442830 NCOA1Q15788 1441 aa22.07■■□□□ 1.12
PTPRE-203ENST00000442830 FAM135AQ9P2D6 1515 aa22.06■■□□□ 1.12
PTPRE-203ENST00000442830 RSPH4AQ5TD94 716 aa22.06■■□□□ 1.12
PTPRE-203ENST00000442830 MBD5Q9P267 1494 aa22.06■■□□□ 1.12
PTPRE-203ENST00000442830 IQSEC2Q5JU85 1478 aa22.03■■□□□ 1.12
PTPRE-203ENST00000442830 CCDC141Q6ZP82 1450 aa22.03■■□□□ 1.12
PTPRE-203ENST00000442830 CAMSAP1Q5T5Y3 1602 aa22.02■■□□□ 1.12
PTPRE-203ENST00000442830 MYO3AQ8NEV4 1616 aa22.02■■□□□ 1.12
PTPRE-203ENST00000442830 NCOA2Q15596 1464 aa22.02■■□□□ 1.12
PTPRE-203ENST00000442830 PLA2R1Q13018 1463 aa22.01■■□□□ 1.11
PTPRE-203ENST00000442830 DHX29Q7Z478 1369 aaKnown RBP22■■□□□ 1.11
PTPRE-203ENST00000442830 GGT6Q6P531 493 aa22■■□□□ 1.11
PTPRE-203ENST00000442830 CAMSAP2Q08AD1 1489 aa21.99■■□□□ 1.11
PTPRE-203ENST00000442830 CEP170BQ9Y4F5 1589 aaPredicted RBP21.99■■□□□ 1.11
PTPRE-203ENST00000442830 PTPRKQ15262 1439 aa21.98■■□□□ 1.11
PTPRE-203ENST00000442830 ARHGEF5Q12774 1597 aa21.98■■□□□ 1.11
PTPRE-203ENST00000442830 ZNF644Q9H582 1327 aaPredicted RBP21.98■■□□□ 1.11
PTPRE-203ENST00000442830 PKD2Q13563 968 aa21.96■■□□□ 1.11
PTPRE-203ENST00000442830 VPS8Q8N3P4 1428 aa21.95■■□□□ 1.1
PTPRE-203ENST00000442830 KDM5DQ9BY66 1539 aa21.94■■□□□ 1.1
PTPRE-203ENST00000442830 LTBP4Q8N2S1 1624 aa21.94■■□□□ 1.1
PTPRE-203ENST00000442830 MAP3K1Q13233 1512 aa21.93■■□□□ 1.1
PTPRE-203ENST00000442830 TSPY4P0CV99 314 aa21.91■■□□□ 1.1
PTPRE-203ENST00000442830 TSPY10P0CW01 314 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms