RNA–Protein interactions for RNA: ENST00000442035.5

UBA1-206, Transcript of ubiquitin like modifier activating enzyme 1, human

TSL 5

Gene UBA1, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA1-206	ENST00000442035	MAGI2	Q86UL8	1455 aa		33.88	■■■■□ 3.01
UBA1-206	ENST00000442035	ARHGEF40	Q8TER5	1519 aa		33.88	■■■■□ 3.01
UBA1-206	ENST00000442035	ZMYM4	Q5VZL5	1548 aa		33.87	■■■■□ 3.01
UBA1-206	ENST00000442035	CEP162	Q5TB80	1403 aa		33.86	■■■■□ 3.01
UBA1-206	ENST00000442035	ZFYVE16	Q7Z3T8	1539 aa		33.84	■■■■□ 3.01
UBA1-206	ENST00000442035	YEATS2	Q9ULM3	1422 aa		33.84	■■■■□ 3.01
UBA1-206	ENST00000442035	MYT1L	Q9UL68	1186 aa		33.81	■■■■□ 3
UBA1-206	ENST00000442035	AFAP1	Q8N556	730 aa		33.8	■■■■□ 3
UBA1-206	ENST00000442035	LOC105371045	A0A1W2PR82	267 aa		33.79	■■■■□ 3
UBA1-206	ENST00000442035	ZNF518A	Q6AHZ1	1483 aa		33.77	■■■■□ 3
UBA1-206	ENST00000442035	ADAMTSL3	P82987	1691 aa		33.76	■■■□□ 2.99
UBA1-206	ENST00000442035	PTPRM	P28827	1452 aa		33.75	■■■□□ 2.99
UBA1-206	ENST00000442035	MTUS2	Q5JR59	1369 aa		33.74	■■■□□ 2.99
UBA1-206	ENST00000442035	BCORL1	Q5H9F3	1711 aa		33.74	■■■□□ 2.99
UBA1-206	ENST00000442035	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.73	■■■□□ 2.99
UBA1-206	ENST00000442035	CDC42BPB	Q9Y5S2	1711 aa		33.72	■■■□□ 2.99
UBA1-206	ENST00000442035	ATP10A	O60312	1499 aa		33.71	■■■□□ 2.99
UBA1-206	ENST00000442035	MLEC	Q14165	292 aa		33.71	■■■□□ 2.99
UBA1-206	ENST00000442035	PREX2	Q70Z35	1606 aa		33.71	■■■□□ 2.99
UBA1-206	ENST00000442035	C9orf84	Q5VXU9	1444 aa		33.67	■■■□□ 2.98
UBA1-206	ENST00000442035	HECW2	Q9P2P5	1572 aa		33.66	■■■□□ 2.98
UBA1-206	ENST00000442035	MADD	Q8WXG6	1647 aa		33.65	■■■□□ 2.98
UBA1-206	ENST00000442035	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.65	■■■□□ 2.98
UBA1-206	ENST00000442035	CCNB3	Q8WWL7	1395 aa		33.65	■■■□□ 2.98
UBA1-206	ENST00000442035	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.65	■■■□□ 2.98
UBA1-206	ENST00000442035	TRAPPC8	Q9Y2L5	1435 aa		33.63	■■■□□ 2.97
UBA1-206	ENST00000442035	KDM5C	P41229	1560 aa		33.63	■■■□□ 2.97
UBA1-206	ENST00000442035	ABCC1	P33527	1531 aa		33.62	■■■□□ 2.97
UBA1-206	ENST00000442035	ARHGEF12	Q9NZN5	1544 aa		33.61	■■■□□ 2.97
UBA1-206	ENST00000442035	CDC42BPA	Q5VT25	1732 aa		33.61	■■■□□ 2.97
UBA1-206	ENST00000442035	PLPPR3	Q6T4P5	718 aa		33.59	■■■□□ 2.97
UBA1-206	ENST00000442035	MLH3	Q9UHC1	1453 aa		33.58	■■■□□ 2.97
UBA1-206	ENST00000442035	HNRNPM	P52272	730 aa	Known RBP eCLIP	33.56	■■■□□ 2.96
UBA1-206	ENST00000442035	SIGLEC1	Q9BZZ2	1709 aa		33.54	■■■□□ 2.96
UBA1-206	ENST00000442035	RIMS1	Q86UR5	1692 aa	Known RBP	33.53	■■■□□ 2.96
UBA1-206	ENST00000442035	EHBP1L1	Q8N3D4	1523 aa		33.53	■■■□□ 2.96
UBA1-206	ENST00000442035	ITSN2	Q9NZM3	1697 aa		33.52	■■■□□ 2.96
UBA1-206	ENST00000442035	PLEKHH2	Q8IVE3	1493 aa		33.5	■■■□□ 2.95
UBA1-206	ENST00000442035	SAMD9L	Q8IVG5	1584 aa		33.5	■■■□□ 2.95
UBA1-206	ENST00000442035	KIAA1107	Q9UPP5	1409 aa		33.49	■■■□□ 2.95
UBA1-206	ENST00000442035	SPAG9	O60271	1321 aa	Known RBP	33.49	■■■□□ 2.95
UBA1-206	ENST00000442035	VPS8	Q8N3P4	1428 aa		33.48	■■■□□ 2.95
UBA1-206	ENST00000442035	DIP2C	Q9Y2E4	1556 aa		33.47	■■■□□ 2.95
UBA1-206	ENST00000442035	SYCP2	Q9BX26	1530 aa		33.47	■■■□□ 2.95
UBA1-206	ENST00000442035	RERE	Q9P2R6	1566 aa		33.42	■■■□□ 2.94
UBA1-206	ENST00000442035	ABCA6	Q8N139	1617 aa		33.42	■■■□□ 2.94
UBA1-206	ENST00000442035	ESF1	Q9H501	851 aa	Known RBP	33.41	■■■□□ 2.94
UBA1-206	ENST00000442035	ZNF644	Q9H582	1327 aa	Predicted RBP	33.41	■■■□□ 2.94
UBA1-206	ENST00000442035	FER1L4	A9Z1Z3	1794 aa		33.39	■■■□□ 2.94
UBA1-206	ENST00000442035	TIAM1	Q13009	1591 aa		33.39	■■■□□ 2.94
UBA1-206	ENST00000442035	KIDINS220	Q9ULH0	1771 aa		33.37	■■■□□ 2.93
UBA1-206	ENST00000442035	NCOA2	Q15596	1464 aa		33.36	■■■□□ 2.93
UBA1-206	ENST00000442035	AGL	P35573	1532 aa		33.35	■■■□□ 2.93
UBA1-206	ENST00000442035	CEBPA	P49715	358 aa	Predicted RBP	33.35	■■■□□ 2.93
UBA1-206	ENST00000442035	LMTK3	Q96Q04	1460 aa		33.33	■■■□□ 2.93
UBA1-206	ENST00000442035	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.31	■■■□□ 2.92
UBA1-206	ENST00000442035	ATP7A	Q04656	1500 aa		33.29	■■■□□ 2.92
UBA1-206	ENST00000442035	LRRC9	Q6ZRR7	1453 aa		33.29	■■■□□ 2.92
UBA1-206	ENST00000442035	HSPA2	P54652	639 aa		33.27	■■■□□ 2.92
UBA1-206	ENST00000442035	APLP2	Q06481	763 aa		33.27	■■■□□ 2.92
UBA1-206	ENST00000442035	MBD5	Q9P267	1494 aa		33.26	■■■□□ 2.92
UBA1-206	ENST00000442035	RSPH4A	Q5TD94	716 aa		33.26	■■■□□ 2.91
UBA1-206	ENST00000442035	KANK4	Q5T7N3	995 aa	Predicted RBP	33.25	■■■□□ 2.91
UBA1-206	ENST00000442035	MAP3K1	Q13233	1512 aa		33.23	■■■□□ 2.91
UBA1-206	ENST00000442035	A2M	P01023	1474 aa		33.22	■■■□□ 2.91
UBA1-206	ENST00000442035	INO80	Q9ULG1	1556 aa	Predicted RBP	33.21	■■■□□ 2.91
UBA1-206	ENST00000442035	CNTLN	Q9NXG0	1405 aa		33.19	■■■□□ 2.9
UBA1-206	ENST00000442035	RTEL1-TNFRSF6B	F6WH68	1400 aa		33.19	■■■□□ 2.9
UBA1-206	ENST00000442035	CAMSAP2	Q08AD1	1489 aa		33.18	■■■□□ 2.9
UBA1-206	ENST00000442035	GGT6	Q6P531	493 aa		33.16	■■■□□ 2.9
UBA1-206	ENST00000442035	TSPY4	P0CV99	314 aa		33.15	■■■□□ 2.9
UBA1-206	ENST00000442035	TSPY10	P0CW01	314 aa		33.15	■■■□□ 2.9
UBA1-206	ENST00000442035	CCDC141	Q6ZP82	1450 aa		33.15	■■■□□ 2.9
UBA1-206	ENST00000442035	ILDR1	Q86SU0	546 aa	Predicted RBP	33.11	■■■□□ 2.89
UBA1-206	ENST00000442035	UHRF1BP1	Q6BDS2	1440 aa		33.11	■■■□□ 2.89
UBA1-206	ENST00000442035	PLXNC1	O60486	1568 aa		33.1	■■■□□ 2.89
UBA1-206	ENST00000442035	PPP6R1	Q9UPN7	881 aa		33.09	■■■□□ 2.89
UBA1-206	ENST00000442035	DHX29	Q7Z478	1369 aa	Known RBP	33.09	■■■□□ 2.89
UBA1-206	ENST00000442035	ZMYM3	Q14202	1370 aa		33.08	■■■□□ 2.89
UBA1-206	ENST00000442035	ADGB	Q8N7X0	1667 aa		33.06	■■■□□ 2.88
UBA1-206	ENST00000442035	PREX1	Q8TCU6	1659 aa		33.06	■■■□□ 2.88
UBA1-206	ENST00000442035	SETD1B	Q9UPS6	1966 aa	Known RBP	33.05	■■■□□ 2.88
UBA1-206	ENST00000442035	MYOM3	Q5VTT5	1437 aa		33.05	■■■□□ 2.88
UBA1-206	ENST00000442035	C3	P01024	1663 aa		33.05	■■■□□ 2.88
UBA1-206	ENST00000442035	MIA2	Q96PC5	1412 aa		33.04	■■■□□ 2.88
UBA1-206	ENST00000442035	KIF3B	O15066	747 aa		33.03	■■■□□ 2.88
UBA1-206	ENST00000442035	ARHGEF5	Q12774	1597 aa		33.01	■■■□□ 2.88
UBA1-206	ENST00000442035	NPAT	Q14207	1427 aa		32.96	■■■□□ 2.87
UBA1-206	ENST00000442035	DMRT2	Q9Y5R5	561 aa		32.95	■■■□□ 2.87
UBA1-206	ENST00000442035	MROH2A	A6NES4	1674 aa		32.94	■■■□□ 2.86
UBA1-206	ENST00000442035	CLTC	Q00610	1675 aa	Known RBP	32.91	■■■□□ 2.86
UBA1-206	ENST00000442035	WASHC2C	Q9Y4E1	1318 aa		32.88	■■■□□ 2.85
UBA1-206	ENST00000442035	PTPRK	Q15262	1439 aa		32.85	■■■□□ 2.85
UBA1-206	ENST00000442035	FBXO41	Q8TF61	875 aa		32.84	■■■□□ 2.85
UBA1-206	ENST00000442035	MAST1	Q9Y2H9	1570 aa		32.83	■■■□□ 2.85
UBA1-206	ENST00000442035	FGD6	Q6ZV73	1430 aa		32.78	■■■□□ 2.84
UBA1-206	ENST00000442035	PTPN23	Q9H3S7	1636 aa		32.77	■■■□□ 2.84
UBA1-206	ENST00000442035	KDM5D	Q9BY66	1539 aa		32.77	■■■□□ 2.84
UBA1-206	ENST00000442035	FAM135A	Q9P2D6	1515 aa		32.76	■■■□□ 2.83
UBA1-206	ENST00000442035	ABCC5	O15440	1437 aa		32.76	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms