RNA–Protein interactions for RNA: ENST00000441896.1

TNRC18P3-201, Transcript of trinucleotide repeat containing 18 pseudogene 3, humanhuman

BASIC

Gene TNRC18P3, Length 2,691 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18P3-201ENST00000441896 CCDC18Q5T9S5 1454 aa23.74■■□□□ 1.39
TNRC18P3-201ENST00000441896 B4GALNT3Q6L9W6 998 aa23.74■■□□□ 1.39
TNRC18P3-201ENST00000441896 CDK13Q14004 1512 aaKnown RBP23.73■■□□□ 1.39
TNRC18P3-201ENST00000441896 MTUS2Q5JR59 1369 aa23.73■■□□□ 1.39
TNRC18P3-201ENST00000441896 NUP153P49790 1475 aaKnown RBP23.71■■□□□ 1.39
TNRC18P3-201ENST00000441896 RTN4Q9NQC3 1192 aaKnown RBP23.71■■□□□ 1.39
TNRC18P3-201ENST00000441896 ERCC6L2Q5T890 1561 aa23.7■■□□□ 1.38
TNRC18P3-201ENST00000441896 PTPRGP23470 1445 aa23.69■■□□□ 1.38
TNRC18P3-201ENST00000441896 SETD5Q9C0A6 1442 aa23.69■■□□□ 1.38
TNRC18P3-201ENST00000441896 PHLDB1Q86UU1 1377 aa23.69■■□□□ 1.38
TNRC18P3-201ENST00000441896 MAGI3Q5TCQ9 1506 aa23.67■■□□□ 1.38
TNRC18P3-201ENST00000441896 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.67■■□□□ 1.38
TNRC18P3-201ENST00000441896 RTL5Q5HYW3 569 aaPredicted RBP23.66■■□□□ 1.38
TNRC18P3-201ENST00000441896 ABCA8O94911 1581 aa23.63■■□□□ 1.37
TNRC18P3-201ENST00000441896 EHBP1L1Q8N3D4 1523 aa23.63■■□□□ 1.37
TNRC18P3-201ENST00000441896 OSCARQ8IYS5 282 aa23.62■■□□□ 1.37
TNRC18P3-201ENST00000441896 TIMELESSQ9UNS1 1208 aa23.62■■□□□ 1.37
TNRC18P3-201ENST00000441896 UBE2Q2Q8WVN8 375 aa23.6■■□□□ 1.37
TNRC18P3-201ENST00000441896 NCOA2Q15596 1464 aa23.58■■□□□ 1.37
TNRC18P3-201ENST00000441896 IPO9Q96P70 1041 aaKnown RBP23.56■■□□□ 1.36
TNRC18P3-201ENST00000441896 SUPT6HQ7KZ85 1726 aaKnown RBP23.56■■□□□ 1.36
TNRC18P3-201ENST00000441896 UACAQ9BZF9 1416 aa23.53■■□□□ 1.36
TNRC18P3-201ENST00000441896 ANP32AP39687 249 aaKnown RBP23.52■■□□□ 1.36
TNRC18P3-201ENST00000441896 ATP10BO94823 1461 aa23.52■■□□□ 1.36
TNRC18P3-201ENST00000441896 FAM50AQ14320 339 aaKnown RBP23.52■■□□□ 1.36
TNRC18P3-201ENST00000441896 ZBTB47Q9UFB7 747 aaPredicted RBP23.5■■□□□ 1.35
TNRC18P3-201ENST00000441896 ARHGEF11O15085 1522 aa23.5■■□□□ 1.35
TNRC18P3-201ENST00000441896 FGD6Q6ZV73 1430 aa23.48■■□□□ 1.35
TNRC18P3-201ENST00000441896 MYOM3Q5VTT5 1437 aa23.47■■□□□ 1.35
TNRC18P3-201ENST00000441896 WASHC2AQ641Q2 1341 aa23.47■■□□□ 1.35
TNRC18P3-201ENST00000441896 CCDC184Q52MB2 194 aa23.46■■□□□ 1.35
TNRC18P3-201ENST00000441896 TROQ12816 1431 aaPredicted RBP23.46■■□□□ 1.35
TNRC18P3-201ENST00000441896 ABCC2Q92887 1545 aa23.44■■□□□ 1.34
TNRC18P3-201ENST00000441896 PLEKHD1A6NEE1 506 aa23.43■■□□□ 1.34
TNRC18P3-201ENST00000441896 TONSLQ96HA7 1378 aa23.42■■□□□ 1.34
TNRC18P3-201ENST00000441896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.38■■□□□ 1.33
TNRC18P3-201ENST00000441896 KIF14Q15058 1648 aa23.37■■□□□ 1.33
TNRC18P3-201ENST00000441896 ZBED9Q6R2W3 1325 aa23.36■■□□□ 1.33
TNRC18P3-201ENST00000441896 FAM9BQ8IZU0 186 aa23.36■■□□□ 1.33
TNRC18P3-201ENST00000441896 UHRF1BP1LA0JNW5 1464 aa23.35■■□□□ 1.33
TNRC18P3-201ENST00000441896 PTPN23Q9H3S7 1636 aa23.35■■□□□ 1.33
TNRC18P3-201ENST00000441896 ADCY10Q96PN6 1610 aa23.34■■□□□ 1.33
TNRC18P3-201ENST00000441896 C11orf95C9JLR9 678 aaPredicted RBP23.32■■□□□ 1.32
TNRC18P3-201ENST00000441896 MIA2Q96PC5 1412 aa23.31■■□□□ 1.32
TNRC18P3-201ENST00000441896 WASHC2CQ9Y4E1 1318 aa23.31■■□□□ 1.32
TNRC18P3-201ENST00000441896 NEFMP07197 916 aa23.31■■□□□ 1.32
TNRC18P3-201ENST00000441896 LAS1LQ9Y4W2 734 aaKnown RBP23.31■■□□□ 1.32
TNRC18P3-201ENST00000441896 TCOF1Q13428 1488 aaKnown RBP23.29■■□□□ 1.32
TNRC18P3-201ENST00000441896 KDM5BQ9UGL1 1544 aa23.28■■□□□ 1.32
TNRC18P3-201ENST00000441896 ZCCHC11Q5TAX3 1644 aaKnown RBP23.28■■□□□ 1.32
TNRC18P3-201ENST00000441896 AKNAQ7Z591 1439 aa23.28■■□□□ 1.32
TNRC18P3-201ENST00000441896 GPATCH8Q9UKJ3 1502 aaKnown RBP23.27■■□□□ 1.32
TNRC18P3-201ENST00000441896 ABCC10Q5T3U5 1492 aa23.26■■□□□ 1.31
TNRC18P3-201ENST00000441896 BRPF3Q9ULD4 1205 aa23.26■■□□□ 1.31
TNRC18P3-201ENST00000441896 PTPRKQ15262 1439 aa23.26■■□□□ 1.31
TNRC18P3-201ENST00000441896 ZNF644Q9H582 1327 aaPredicted RBP23.25■■□□□ 1.31
TNRC18P3-201ENST00000441896 SLC24A1O60721 1099 aa23.25■■□□□ 1.31
TNRC18P3-201ENST00000441896 MRS2Q9HD23 443 aa23.25■■□□□ 1.31
TNRC18P3-201ENST00000441896 CFDP1Q9UEE9 299 aaPredicted RBP23.25■■□□□ 1.31
TNRC18P3-201ENST00000441896 CNTLNQ9NXG0 1405 aa23.24■■□□□ 1.31
TNRC18P3-201ENST00000441896 HSPA5P11021 654 aaKnown RBP23.24■■□□□ 1.31
TNRC18P3-201ENST00000441896 NPM2Q86SE8 214 aaKnown RBP23.24■■□□□ 1.31
TNRC18P3-201ENST00000441896 USP35Q9P2H5 1018 aa23.23■■□□□ 1.31
TNRC18P3-201ENST00000441896 EIF5BO60841 1220 aaKnown RBP23.22■■□□□ 1.31
TNRC18P3-201ENST00000441896 ITSN2Q9NZM3 1697 aa23.21■■□□□ 1.31
TNRC18P3-201ENST00000441896 PRKRIP1Q9H875 184 aaPredicted RBP23.21■■□□□ 1.31
TNRC18P3-201ENST00000441896 ZNF777Q9ULD5 760 aaPredicted RBP23.2■■□□□ 1.3
TNRC18P3-201ENST00000441896 CDC42BPAQ5VT25 1732 aa23.18■■□□□ 1.3
TNRC18P3-201ENST00000441896 SMG6Q86US8 1419 aaKnown RBP23.17■■□□□ 1.3
TNRC18P3-201ENST00000441896 CHIC2Q9UKJ5 165 aa23.16■■□□□ 1.3
TNRC18P3-201ENST00000441896 CAMSAP2Q08AD1 1489 aa23.16■■□□□ 1.3
TNRC18P3-201ENST00000441896 RNF123Q5XPI4 1314 aa23.15■■□□□ 1.3
TNRC18P3-201ENST00000441896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.15■■□□□ 1.3
TNRC18P3-201ENST00000441896 TTC37Q6PGP7 1564 aa23.14■■□□□ 1.29
TNRC18P3-201ENST00000441896 DAPK1P53355 1430 aa23.11■■□□□ 1.29
TNRC18P3-201ENST00000441896 ABCC5O15440 1437 aa23.11■■□□□ 1.29
TNRC18P3-201ENST00000441896 NUDCQ9Y266 331 aa23.1■■□□□ 1.29
TNRC18P3-201ENST00000441896 NPM1P06748 294 aaKnown RBP eCLIP23.1■■□□□ 1.29
TNRC18P3-201ENST00000441896 PPM1GO15355 546 aaPredicted RBP23.09■■□□□ 1.29
TNRC18P3-201ENST00000441896 WDR7Q9Y4E6 1490 aa23.09■■□□□ 1.29
TNRC18P3-201ENST00000441896 HFM1A2PYH4 1435 aa23.09■■□□□ 1.29
TNRC18P3-201ENST00000441896 RRP7BPQ9NSQ0 103 aa23.09■■□□□ 1.29
TNRC18P3-201ENST00000441896 DNMT1P26358 1616 aaKnown RBP23.09■■□□□ 1.29
TNRC18P3-201ENST00000441896 CYB5RLQ6IPT4 315 aa23.08■■□□□ 1.29
TNRC18P3-201ENST00000441896 RIMBP3CA6NJZ7 1639 aa23.07■■□□□ 1.28
TNRC18P3-201ENST00000441896 RIMBP3BA6NNM3 1639 aa23.07■■□□□ 1.28
TNRC18P3-201ENST00000441896 PREX2Q70Z35 1606 aa23.07■■□□□ 1.28
TNRC18P3-201ENST00000441896 RIMBP3Q9UFD9 1639 aa23.07■■□□□ 1.28
TNRC18P3-201ENST00000441896 NAIPQ13075 1403 aa23.07■■□□□ 1.28
TNRC18P3-201ENST00000441896 ASXL2Q76L83 1435 aa23.07■■□□□ 1.28
TNRC18P3-201ENST00000441896 CDC42BPBQ9Y5S2 1711 aa23.06■■□□□ 1.28
TNRC18P3-201ENST00000441896 EIF4G2P78344 907 aaKnown RBP eCLIP23.06■■□□□ 1.28
TNRC18P3-201ENST00000441896 GSE1Q14687 1217 aa23.06■■□□□ 1.28
TNRC18P3-201ENST00000441896 CCDC7Q96M83 1385 aa23.04■■□□□ 1.28
TNRC18P3-201ENST00000441896 ARHGAP5Q13017 1502 aa23.03■■□□□ 1.28
TNRC18P3-201ENST00000441896 PDE4AP27815 886 aa23.03■■□□□ 1.28
TNRC18P3-201ENST00000441896 HNRNPMP52272 730 aaKnown RBP eCLIP23.02■■□□□ 1.28
TNRC18P3-201ENST00000441896 MYO5CQ9NQX4 1742 aa23.02■■□□□ 1.27
TNRC18P3-201ENST00000441896 NCOA1Q15788 1441 aa23.01■■□□□ 1.27
TNRC18P3-201ENST00000441896 SAMD9LQ8IVG5 1584 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms