RNA–Protein interactions for RNA: ENST00000441867.5

ABCF1-203, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 5

Gene ABCF1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-203ENST00000441867 CSRNP3Q8WYN3 585 aa15.58■□□□□ 0.08
ABCF1-203ENST00000441867 TTC37Q6PGP7 1564 aa15.57■□□□□ 0.08
ABCF1-203ENST00000441867 SCAPERQ9BY12 1400 aa15.56■□□□□ 0.08
ABCF1-203ENST00000441867 ATP10AO60312 1499 aa15.56■□□□□ 0.08
ABCF1-203ENST00000441867 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.55■□□□□ 0.08
ABCF1-203ENST00000441867 ARHGEF12Q9NZN5 1544 aa15.53■□□□□ 0.08
ABCF1-203ENST00000441867 PLCH2O75038 1416 aa15.53■□□□□ 0.08
ABCF1-203ENST00000441867 C9orf84Q5VXU9 1444 aa15.53■□□□□ 0.08
ABCF1-203ENST00000441867 UHRF1BP1Q6BDS2 1440 aa15.53■□□□□ 0.08
ABCF1-203ENST00000441867 CEBPAP49715 358 aaPredicted RBP15.53■□□□□ 0.08
ABCF1-203ENST00000441867 EFCAB2Q5VUJ9 269 aa15.53■□□□□ 0.08
ABCF1-203ENST00000441867 RANGAP1P46060 587 aaPredicted RBP15.52■□□□□ 0.08
ABCF1-203ENST00000441867 HECW1Q76N89 1606 aa15.52■□□□□ 0.08
ABCF1-203ENST00000441867 PTPRTO14522 1441 aa15.51■□□□□ 0.07
ABCF1-203ENST00000441867 FER1L4A9Z1Z3 1794 aa15.5■□□□□ 0.07
ABCF1-203ENST00000441867 PREX1Q8TCU6 1659 aa15.49■□□□□ 0.07
ABCF1-203ENST00000441867 STRCQ7RTU9 1775 aa15.48■□□□□ 0.07
ABCF1-203ENST00000441867 SIGLEC1Q9BZZ2 1709 aa15.48■□□□□ 0.07
ABCF1-203ENST00000441867 CDK11AQ9UQ88 783 aaPredicted RBP15.47■□□□□ 0.07
ABCF1-203ENST00000441867 ESF1Q9H501 851 aaKnown RBP15.46■□□□□ 0.07
ABCF1-203ENST00000441867 IQSEC2Q5JU85 1478 aa15.46■□□□□ 0.06
ABCF1-203ENST00000441867 MYT1LQ9UL68 1186 aa15.44■□□□□ 0.06
ABCF1-203ENST00000441867 ZNF518AQ6AHZ1 1483 aa15.44■□□□□ 0.06
ABCF1-203ENST00000441867 SETD1BQ9UPS6 1966 aaKnown RBP15.43■□□□□ 0.06
ABCF1-203ENST00000441867 EEA1Q15075 1411 aa15.43■□□□□ 0.06
ABCF1-203ENST00000441867 AFAP1Q8N556 730 aa15.42■□□□□ 0.06
ABCF1-203ENST00000441867 TRAPPC8Q9Y2L5 1435 aa15.42■□□□□ 0.06
ABCF1-203ENST00000441867 LTBP4Q8N2S1 1624 aa15.39■□□□□ 0.05
ABCF1-203ENST00000441867 CDK13Q14004 1512 aaKnown RBP15.39■□□□□ 0.05
ABCF1-203ENST00000441867 UBAP1LF5GYI3 381 aa15.39■□□□□ 0.05
ABCF1-203ENST00000441867 ATP1B4Q9UN42 357 aaPredicted RBP15.39■□□□□ 0.05
ABCF1-203ENST00000441867 NCOA1Q15788 1441 aa15.37■□□□□ 0.05
ABCF1-203ENST00000441867 REREQ9P2R6 1566 aa15.36■□□□□ 0.05
ABCF1-203ENST00000441867 CNTLNQ9NXG0 1405 aa15.36■□□□□ 0.05
ABCF1-203ENST00000441867 KDM5CP41229 1560 aa15.36■□□□□ 0.05
ABCF1-203ENST00000441867 MLH3Q9UHC1 1453 aa15.35■□□□□ 0.05
ABCF1-203ENST00000441867 FMN1Q68DA7 1419 aa15.34■□□□□ 0.05
ABCF1-203ENST00000441867 AGLP35573 1532 aa15.34■□□□□ 0.05
ABCF1-203ENST00000441867 ARHGAP5Q13017 1502 aa15.34■□□□□ 0.05
ABCF1-203ENST00000441867 CLIP1P30622 1438 aa15.33■□□□□ 0.04
ABCF1-203ENST00000441867 TROQ12816 1431 aaPredicted RBP15.32■□□□□ 0.04
ABCF1-203ENST00000441867 DIP2CQ9Y2E4 1556 aa15.32■□□□□ 0.04
ABCF1-203ENST00000441867 NPATQ14207 1427 aa15.31■□□□□ 0.04
ABCF1-203ENST00000441867 MYO5CQ9NQX4 1742 aa15.31■□□□□ 0.04
ABCF1-203ENST00000441867 PKD2Q13563 968 aa15.29■□□□□ 0.04
ABCF1-203ENST00000441867 KIF14Q15058 1648 aa15.28■□□□□ 0.04
ABCF1-203ENST00000441867 ZNF335Q9H4Z2 1342 aaPredicted RBP15.28■□□□□ 0.04
ABCF1-203ENST00000441867 HSPA1LP34931 641 aa15.28■□□□□ 0.04
ABCF1-203ENST00000441867 C3P01024 1663 aa15.28■□□□□ 0.04
ABCF1-203ENST00000441867 MED1Q15648 1581 aaPredicted RBP15.28■□□□□ 0.04
ABCF1-203ENST00000441867 NCKAP5LQ9HCH0 1330 aa15.27■□□□□ 0.04
ABCF1-203ENST00000441867 ZMYM3Q14202 1370 aa15.26■□□□□ 0.03
ABCF1-203ENST00000441867 CAMSAP1Q5T5Y3 1602 aa15.25■□□□□ 0.03
ABCF1-203ENST00000441867 SCAF1Q9H7N4 1312 aaKnown RBP15.25■□□□□ 0.03
ABCF1-203ENST00000441867 UBTFP17480 764 aaKnown RBP15.25■□□□□ 0.03
ABCF1-203ENST00000441867 ABCA6Q8N139 1617 aa15.25■□□□□ 0.03
ABCF1-203ENST00000441867 PLA2R1Q13018 1463 aa15.23■□□□□ 0.03
ABCF1-203ENST00000441867 PIP4K2BP78356 416 aa15.23■□□□□ 0.03
ABCF1-203ENST00000441867 PPP6R1Q9UPN7 881 aa15.21■□□□□ 0.03
ABCF1-203ENST00000441867 TOM1O60784 492 aa15.2■□□□□ 0.02
ABCF1-203ENST00000441867 ABCC1P33527 1531 aa15.2■□□□□ 0.02
ABCF1-203ENST00000441867 ARHGAP35Q9NRY4 1499 aa15.2■□□□□ 0.02
ABCF1-203ENST00000441867 SPAG9O60271 1321 aaKnown RBP15.19■□□□□ 0.02
ABCF1-203ENST00000441867 TCOF1Q13428 1488 aaKnown RBP15.19■□□□□ 0.02
ABCF1-203ENST00000441867 MROH2AA6NES4 1674 aa15.17■□□□□ 0.02
ABCF1-203ENST00000441867 PTPRKQ15262 1439 aa15.16■□□□□ 0.02
ABCF1-203ENST00000441867 ZNF777Q9ULD5 760 aaPredicted RBP15.15■□□□□ 0.02
ABCF1-203ENST00000441867 CDC42BPBQ9Y5S2 1711 aa15.14■□□□□ 0.01
ABCF1-203ENST00000441867 PREX2Q70Z35 1606 aa15.14■□□□□ 0.01
ABCF1-203ENST00000441867 KIDINS220Q9ULH0 1771 aa15.14■□□□□ 0.01
ABCF1-203ENST00000441867 CCDC18Q5T9S5 1454 aa15.14■□□□□ 0.01
ABCF1-203ENST00000441867 GGT6Q6P531 493 aa15.13■□□□□ 0.01
ABCF1-203ENST00000441867 ITSN2Q9NZM3 1697 aa15.12■□□□□ 0.01
ABCF1-203ENST00000441867 SAMD9LQ8IVG5 1584 aa15.12■□□□□ 0.01
ABCF1-203ENST00000441867 CEP170BQ9Y4F5 1589 aaPredicted RBP15.12■□□□□ 0.01
ABCF1-203ENST00000441867 CASKIN1Q8WXD9 1431 aa15.11■□□□□ 0.01
ABCF1-203ENST00000441867 KIAA1107Q9UPP5 1409 aa15.11■□□□□ 0.01
ABCF1-203ENST00000441867 HNRNPMP52272 730 aaKnown RBP eCLIP15.11■□□□□ 0.01
ABCF1-203ENST00000441867 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
ABCF1-203ENST00000441867 CPS1P31327 1500 aa15.11■□□□□ 0.01
ABCF1-203ENST00000441867 A2MP01023 1474 aa15.1■□□□□ 0.01
ABCF1-203ENST00000441867 ZNF142P52746 1687 aaPredicted RBP15.09■□□□□ 0.01
ABCF1-203ENST00000441867 A2ML1A8K2U0 1454 aa15.09■□□□□ 0.01
ABCF1-203ENST00000441867 PLEKHH2Q8IVE3 1493 aa15.09■□□□□ 0.01
ABCF1-203ENST00000441867 MYO3AQ8NEV4 1616 aa15.09■□□□□ 0.01
ABCF1-203ENST00000441867 CFDP1Q9UEE9 299 aaPredicted RBP15.08■□□□□ 0
ABCF1-203ENST00000441867 SHANK2Q9UPX8 1470 aa15.08■□□□□ 0
ABCF1-203ENST00000441867 RGS17Q9UGC6 210 aaPredicted RBP15.07■□□□□ 0
ABCF1-203ENST00000441867 ATP7AQ04656 1500 aa15.07■□□□□ 0
ABCF1-203ENST00000441867 GPATCH8Q9UKJ3 1502 aaKnown RBP15.07■□□□□ 0
ABCF1-203ENST00000441867 ANKLE2Q86XL3 938 aa15.06■□□□□ 0
ABCF1-203ENST00000441867 SYCP2Q9BX26 1530 aa15.06■□□□□ 0
ABCF1-203ENST00000441867 PLXNC1O60486 1568 aa15.06■□□□□ 0
ABCF1-203ENST00000441867 FOXD1Q16676 465 aa15.05■□□□□ -0
ABCF1-203ENST00000441867 CLTCQ00610 1675 aaKnown RBP15.05■□□□□ -0
ABCF1-203ENST00000441867 THEMISQ8N1K5 641 aaPredicted RBP15.04■□□□□ -0
ABCF1-203ENST00000441867 SUPT6HQ7KZ85 1726 aaKnown RBP15.03■□□□□ -0
ABCF1-203ENST00000441867 TNRQ92752 1358 aa15.03■□□□□ -0
ABCF1-203ENST00000441867 CCNB3Q8WWL7 1395 aa15.02■□□□□ -0
ABCF1-203ENST00000441867 CDC42BPAQ5VT25 1732 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms