RNA–Protein interactions for RNA: ENST00000441867.5

ABCF1-203, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 5

Gene ABCF1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-203ENST00000441867 DDX3XO00571 662 aaKnown RBP eCLIP9.38□□□□□ -0.916e-21■■■■■ 26.8
ABCF1-203ENST00000441867 GPKOWQ92917 476 aaPredicted RBP eCLIP10.63□□□□□ -0.717e-16■□□□□ 10.7
ABCF1-203ENST00000441867 SRSF1Q07955 248 aaKnown RBP eCLIP9.74□□□□□ -0.859e-12■■□□□ 14.2
ABCF1-203ENST00000441867 PUM1Q14671 1186 aaKnown RBP eCLIP10.61□□□□□ -0.711e-11■□□□□ 10.8
ABCF1-203ENST00000441867 PPIGQ13427 754 aaKnown RBP eCLIP11.24□□□□□ -0.617e-11■□□□□ 9.4
ABCF1-203ENST00000441867 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.55□□□□□ -0.881e-10■■■■■ 50.7
ABCF1-203ENST00000441867 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.24□□□□□ -0.612e-9■□□□□ 9.9
ABCF1-203ENST00000441867 DDX6P26196 483 aaKnown RBP eCLIP10□□□□□ -0.813e-9■□□□□ 10.4
ABCF1-203ENST00000441867 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.76□□□□□ -0.854e-9■■■■■ 58.7
ABCF1-203ENST00000441867 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.61□□□□□ -0.551e-8■■□□□ 13
ABCF1-203ENST00000441867 AQRO60306 1485 aaKnown RBP eCLIP17.38■□□□□ 0.371e-8■■■■■ 27.4
ABCF1-203ENST00000441867 RBFOX2O43251 390 aaKnown RBP eCLIP7.14□□□□□ -1.272e-8■■■■□ 20.3
ABCF1-203ENST00000441867 ZNF622Q969S3 477 aaKnown RBP eCLIP12.63□□□□□ -0.392e-8■■■■□ 24.2
ABCF1-203ENST00000441867 LARP4Q71RC2 724 aaKnown RBP eCLIP8.47□□□□□ -1.054e-8■■■□□ 16.7
ABCF1-203ENST00000441867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.58□□□□□ -0.086e-8■■■■□ 19.3
ABCF1-203ENST00000441867 YBX3P16989 372 aaKnown RBP eCLIP13.26□□□□□ -0.291e-7■□□□□ 8.2
ABCF1-203ENST00000441867 G3BP1Q13283 466 aaKnown RBP eCLIP11.21□□□□□ -0.611e-7■■■□□ 18.1
ABCF1-203ENST00000441867 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.95□□□□□ -0.981e-7■■■■□ 21.8
ABCF1-203ENST00000441867 TRA2AQ13595 282 aaKnown RBP eCLIP9.3□□□□□ -0.921e-7■■■■■ 27
ABCF1-203ENST00000441867 NPM1P06748 294 aaKnown RBP eCLIP16.76■□□□□ 0.272e-7■■■■□ 21.1
ABCF1-203ENST00000441867 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.39□□□□□ -1.072e-7■■■□□ 14.6
ABCF1-203ENST00000441867 EFTUD2Q15029 972 aaKnown RBP eCLIP8.77□□□□□ -1.013e-7■■■□□ 15.7
ABCF1-203ENST00000441867 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.88□□□□□ -0.993e-7■■■■■ 38.6
ABCF1-203ENST00000441867 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.4□□□□□ -1.064e-7■■■□□ 18.7
ABCF1-203ENST00000441867 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.19□□□□□ -1.14e-7■■■■■ 30.9
ABCF1-203ENST00000441867 FTOQ9C0B1 505 aaKnown RBP eCLIP11.01□□□□□ -0.656e-7■■■□□ 15
ABCF1-203ENST00000441867 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.41□□□□□ -1.068e-7■■■■■ 40.9
ABCF1-203ENST00000441867 RBM5P52756 815 aaKnown RBP eCLIP11.8□□□□□ -0.528e-7■□□□□ 8.3
ABCF1-203ENST00000441867 FXR2P51116 673 aaKnown RBP eCLIP10.33□□□□□ -0.761e-6■■■□□ 17.3
ABCF1-203ENST00000441867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.9□□□□□ -0.341e-6■■■■■ 32.7
ABCF1-203ENST00000441867 FMR1Q06787 632 aaKnown RBP eCLIP12.38□□□□□ -0.432e-6■■■□□ 16.8
ABCF1-203ENST00000441867 XRCC6P12956 609 aaKnown RBP eCLIP10.11□□□□□ -0.792e-6■□□□□ 9.4
ABCF1-203ENST00000441867 TARDBPQ13148 414 aaKnown RBP eCLIP9.72□□□□□ -0.853e-6■□□□□ 10.6
ABCF1-203ENST00000441867 AARSP49588 968 aaKnown RBP eCLIP9.98□□□□□ -0.814e-6■■■□□ 17.5
ABCF1-203ENST00000441867 HLTFQ14527 1009 aaKnown RBP eCLIP9.29□□□□□ -0.925e-6■□□□□ 8.8
ABCF1-203ENST00000441867 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.64□□□□□ -0.876e-6■■■■□ 19.3
ABCF1-203ENST00000441867 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.23□□□□□ -0.937e-6■■■■□ 21.6
Retrieved 37 of 37 RNA–protein pairs in 9.5 ms