RNA–Protein interactions for RNA: ENST00000440765.2

SIL1-203, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-203ENST00000440765 IQSEC2Q5JU85 1478 aa13.12□□□□□ -0.31
SIL1-203ENST00000440765 UBAP1LF5GYI3 381 aa13.12□□□□□ -0.31
SIL1-203ENST00000440765 HECW1Q76N89 1606 aa13.12□□□□□ -0.31
SIL1-203ENST00000440765 ARHGEF12Q9NZN5 1544 aa13.12□□□□□ -0.31
SIL1-203ENST00000440765 SETD1BQ9UPS6 1966 aaKnown RBP13.11□□□□□ -0.31
SIL1-203ENST00000440765 RAPGEF6Q8TEU7 1601 aa13.1□□□□□ -0.31
SIL1-203ENST00000440765 MAGI2Q86UL8 1455 aa13.09□□□□□ -0.31
SIL1-203ENST00000440765 MED1Q15648 1581 aaPredicted RBP13.07□□□□□ -0.32
SIL1-203ENST00000440765 C9orf84Q5VXU9 1444 aa13.05□□□□□ -0.32
SIL1-203ENST00000440765 ATP10AO60312 1499 aa13.05□□□□□ -0.32
SIL1-203ENST00000440765 SCAF1Q9H7N4 1312 aaKnown RBP13.05□□□□□ -0.32
SIL1-203ENST00000440765 C3P01024 1663 aa13.04□□□□□ -0.32
SIL1-203ENST00000440765 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.03□□□□□ -0.32
SIL1-203ENST00000440765 PLEKHD1A6NEE1 506 aa13.03□□□□□ -0.32
SIL1-203ENST00000440765 PHF23Q9BUL5 403 aaPredicted RBP13.03□□□□□ -0.32
SIL1-203ENST00000440765 SCAPERQ9BY12 1400 aa13.03□□□□□ -0.32
SIL1-203ENST00000440765 ZNF335Q9H4Z2 1342 aaPredicted RBP13.02□□□□□ -0.33
SIL1-203ENST00000440765 NUP153P49790 1475 aaKnown RBP13.02□□□□□ -0.33
SIL1-203ENST00000440765 HSPA1LP34931 641 aa13.01□□□□□ -0.33
SIL1-203ENST00000440765 NCOA1Q15788 1441 aa13.01□□□□□ -0.33
SIL1-203ENST00000440765 PIP4K2BP78356 416 aa13□□□□□ -0.33
SIL1-203ENST00000440765 MYT1LQ9UL68 1186 aa13□□□□□ -0.33
SIL1-203ENST00000440765 ESF1Q9H501 851 aaKnown RBP12.99□□□□□ -0.33
SIL1-203ENST00000440765 CAMSAP1Q5T5Y3 1602 aa12.99□□□□□ -0.33
SIL1-203ENST00000440765 SAMD9Q5K651 1589 aa12.98□□□□□ -0.33
SIL1-203ENST00000440765 RANGAP1P46060 587 aaPredicted RBP12.97□□□□□ -0.33
SIL1-203ENST00000440765 NCKAP5LQ9HCH0 1330 aa12.96□□□□□ -0.33
SIL1-203ENST00000440765 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.34
SIL1-203ENST00000440765 PRXQ9BXM0 1461 aa12.94□□□□□ -0.34
SIL1-203ENST00000440765 SUPT6HQ7KZ85 1726 aaKnown RBP12.93□□□□□ -0.34
SIL1-203ENST00000440765 PLCH2O75038 1416 aa12.92□□□□□ -0.34
SIL1-203ENST00000440765 MYO5CQ9NQX4 1742 aa12.92□□□□□ -0.34
SIL1-203ENST00000440765 DIP2CQ9Y2E4 1556 aa12.91□□□□□ -0.34
SIL1-203ENST00000440765 SENP3Q9H4L4 574 aaPredicted RBP12.91□□□□□ -0.34
SIL1-203ENST00000440765 ZNF518AQ6AHZ1 1483 aa12.9□□□□□ -0.34
SIL1-203ENST00000440765 EFCAB2Q5VUJ9 269 aa12.89□□□□□ -0.35
SIL1-203ENST00000440765 AFAP1Q8N556 730 aa12.89□□□□□ -0.35
SIL1-203ENST00000440765 ABCA6Q8N139 1617 aa12.88□□□□□ -0.35
SIL1-203ENST00000440765 TOM1O60784 492 aa12.88□□□□□ -0.35
SIL1-203ENST00000440765 CDK13Q14004 1512 aaKnown RBP12.88□□□□□ -0.35
SIL1-203ENST00000440765 KDM5CP41229 1560 aa12.86□□□□□ -0.35
SIL1-203ENST00000440765 REREQ9P2R6 1566 aa12.86□□□□□ -0.35
SIL1-203ENST00000440765 PPP6R1Q9UPN7 881 aa12.86□□□□□ -0.35
SIL1-203ENST00000440765 AGLP35573 1532 aa12.85□□□□□ -0.35
SIL1-203ENST00000440765 ARHGAP5Q13017 1502 aa12.85□□□□□ -0.35
SIL1-203ENST00000440765 PKD2Q13563 968 aa12.85□□□□□ -0.35
SIL1-203ENST00000440765 CNTLNQ9NXG0 1405 aa12.85□□□□□ -0.35
SIL1-203ENST00000440765 MYO3AQ8NEV4 1616 aa12.84□□□□□ -0.35
SIL1-203ENST00000440765 NPATQ14207 1427 aa12.83□□□□□ -0.36
SIL1-203ENST00000440765 MROH2AA6NES4 1674 aa12.83□□□□□ -0.36
SIL1-203ENST00000440765 ZNF142P52746 1687 aaPredicted RBP12.83□□□□□ -0.36
SIL1-203ENST00000440765 ATP1B4Q9UN42 357 aaPredicted RBP12.82□□□□□ -0.36
SIL1-203ENST00000440765 PLA2R1Q13018 1463 aa12.82□□□□□ -0.36
SIL1-203ENST00000440765 CEP170BQ9Y4F5 1589 aaPredicted RBP12.81□□□□□ -0.36
SIL1-203ENST00000440765 KIF14Q15058 1648 aa12.81□□□□□ -0.36
SIL1-203ENST00000440765 TCOF1Q13428 1488 aaKnown RBP12.81□□□□□ -0.36
SIL1-203ENST00000440765 ZMYM3Q14202 1370 aa12.8□□□□□ -0.36
SIL1-203ENST00000440765 CLTCQ00610 1675 aaKnown RBP12.8□□□□□ -0.36
SIL1-203ENST00000440765 MLH3Q9UHC1 1453 aa12.79□□□□□ -0.36
SIL1-203ENST00000440765 CPS1P31327 1500 aa12.79□□□□□ -0.36
SIL1-203ENST00000440765 CHIC1Q5VXU3 224 aa12.77□□□□□ -0.37
SIL1-203ENST00000440765 RGS17Q9UGC6 210 aaPredicted RBP12.77□□□□□ -0.37
SIL1-203ENST00000440765 PTPRKQ15262 1439 aa12.77□□□□□ -0.37
SIL1-203ENST00000440765 SHANK2Q9UPX8 1470 aa12.77□□□□□ -0.37
SIL1-203ENST00000440765 POLR1AO95602 1720 aaPredicted RBP12.76□□□□□ -0.37
SIL1-203ENST00000440765 KIDINS220Q9ULH0 1771 aa12.76□□□□□ -0.37
SIL1-203ENST00000440765 ITSN2Q9NZM3 1697 aa12.75□□□□□ -0.37
SIL1-203ENST00000440765 CDC42BPBQ9Y5S2 1711 aa12.75□□□□□ -0.37
SIL1-203ENST00000440765 ALKQ9UM73 1620 aa12.74□□□□□ -0.37
SIL1-203ENST00000440765 CDK11AQ9UQ88 783 aaPredicted RBP12.73□□□□□ -0.37
SIL1-203ENST00000440765 SETD1AO15047 1707 aaKnown RBP12.73□□□□□ -0.37
SIL1-203ENST00000440765 ABCC1P33527 1531 aa12.72□□□□□ -0.37
SIL1-203ENST00000440765 DNMT1P26358 1616 aaKnown RBP12.71□□□□□ -0.37
SIL1-203ENST00000440765 CSRNP3Q8WYN3 585 aa12.71□□□□□ -0.37
SIL1-203ENST00000440765 NEURL4Q96JN8 1562 aa12.71□□□□□ -0.37
SIL1-203ENST00000440765 CLIP1P30622 1438 aa12.7□□□□□ -0.38
SIL1-203ENST00000440765 POTEAQ6S8J7 498 aa12.69□□□□□ -0.38
SIL1-203ENST00000440765 A2ML1A8K2U0 1454 aa12.69□□□□□ -0.38
SIL1-203ENST00000440765 PREX2Q70Z35 1606 aa12.69□□□□□ -0.38
SIL1-203ENST00000440765 VWDEQ8N2E2 1590 aa12.69□□□□□ -0.38
SIL1-203ENST00000440765 GGT6Q6P531 493 aa12.68□□□□□ -0.38
SIL1-203ENST00000440765 TROQ12816 1431 aaPredicted RBP12.68□□□□□ -0.38
SIL1-203ENST00000440765 RNF17Q9BXT8 1623 aaKnown RBP12.66□□□□□ -0.38
SIL1-203ENST00000440765 SAMD9LQ8IVG5 1584 aa12.66□□□□□ -0.38
SIL1-203ENST00000440765 ZNF777Q9ULD5 760 aaPredicted RBP12.65□□□□□ -0.38
SIL1-203ENST00000440765 STRCP1A6NGW2 1772 aa12.64□□□□□ -0.39
SIL1-203ENST00000440765 SPAG9O60271 1321 aaKnown RBP12.63□□□□□ -0.39
SIL1-203ENST00000440765 LRRIQ1Q96JM4 1722 aa12.63□□□□□ -0.39
SIL1-203ENST00000440765 ANKLE2Q86XL3 938 aa12.63□□□□□ -0.39
SIL1-203ENST00000440765 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.63□□□□□ -0.39
SIL1-203ENST00000440765 LRRC7Q96NW7 1537 aa12.62□□□□□ -0.39
SIL1-203ENST00000440765 CDC42BPAQ5VT25 1732 aa12.62□□□□□ -0.39
SIL1-203ENST00000440765 NPHP4O75161 1426 aaPredicted RBP12.62□□□□□ -0.39
SIL1-203ENST00000440765 FMN1Q68DA7 1419 aa12.62□□□□□ -0.39
SIL1-203ENST00000440765 ATP7AQ04656 1500 aa12.61□□□□□ -0.39
SIL1-203ENST00000440765 SYCP2Q9BX26 1530 aa12.61□□□□□ -0.39
SIL1-203ENST00000440765 IQGAP1P46940 1657 aa12.61□□□□□ -0.39
SIL1-203ENST00000440765 SYNMO15061 1565 aa12.6□□□□□ -0.39
SIL1-203ENST00000440765 PLXNC1O60486 1568 aa12.6□□□□□ -0.39
SIL1-203ENST00000440765 A2MP01023 1474 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms