RNA–Protein interactions for RNA: ENST00000440356.1

AC004854.1-201, humanhuman

BASIC

Gene AC004854.1, Length 349 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004854.1-201ENST00000440356 TMC2Q8TDI7 906 aa13.26□□□□□ -0.29
AC004854.1-201ENST00000440356 C2orf72A6NCS6 295 aa13.2□□□□□ -0.3
AC004854.1-201ENST00000440356 CADPS2Q86UW7 1296 aa13.18□□□□□ -0.3
AC004854.1-201ENST00000440356 KIF3CO14782 793 aa13.17□□□□□ -0.3
AC004854.1-201ENST00000440356 GPHNQ9NQX3 736 aaPredicted RBP13.17□□□□□ -0.3
AC004854.1-201ENST00000440356 SNPHO15079 494 aa13.16□□□□□ -0.3
AC004854.1-201ENST00000440356 PDE4AP27815 886 aa13.16□□□□□ -0.3
AC004854.1-201ENST00000440356 CRISPLD2Q9H0B8 497 aa13.14□□□□□ -0.31
AC004854.1-201ENST00000440356 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
AC004854.1-201ENST00000440356 TSHZ2Q9NRE2 1034 aa13.13□□□□□ -0.31
AC004854.1-201ENST00000440356 LARP6Q9BRS8 491 aaKnown RBP13.12□□□□□ -0.31
AC004854.1-201ENST00000440356 HAP1P54257 671 aaPredicted RBP13.1□□□□□ -0.31
AC004854.1-201ENST00000440356 FOXK1P85037 733 aa13.1□□□□□ -0.31
AC004854.1-201ENST00000440356 DSG2Q14126 1118 aa13.09□□□□□ -0.31
AC004854.1-201ENST00000440356 DOK7Q18PE1 504 aa13.09□□□□□ -0.31
AC004854.1-201ENST00000440356 FAM163AQ96GL9 167 aaPredicted RBP13.08□□□□□ -0.32
AC004854.1-201ENST00000440356 DDX27Q96GQ7 796 aaKnown RBP13.08□□□□□ -0.32
AC004854.1-201ENST00000440356 PPP1R15BQ5SWA1 713 aa13.07□□□□□ -0.32
AC004854.1-201ENST00000440356 PLPP6Q8IY26 295 aa13.07□□□□□ -0.32
AC004854.1-201ENST00000440356 ZNF710Q8N1W2 664 aa13.06□□□□□ -0.32
AC004854.1-201ENST00000440356 RIMBP2O15034 1052 aa13.05□□□□□ -0.32
AC004854.1-201ENST00000440356 HOXB3P14651 431 aaPredicted RBP13.05□□□□□ -0.32
AC004854.1-201ENST00000440356 MFSD10Q14728 455 aa13.04□□□□□ -0.32
AC004854.1-201ENST00000440356 WDR70Q9NW82 654 aa13.01□□□□□ -0.33
AC004854.1-201ENST00000440356 ST18O60284 1047 aa12.99□□□□□ -0.33
AC004854.1-201ENST00000440356 SLC34A2O95436 690 aa12.96□□□□□ -0.33
AC004854.1-201ENST00000440356 ZSWIM6Q9HCJ5 1215 aa12.96□□□□□ -0.33
AC004854.1-201ENST00000440356 LCE2DQ5TA82 110 aaPredicted RBP12.92□□□□□ -0.34
AC004854.1-201ENST00000440356 UPF1Q92900 1129 aaKnown RBP eCLIP12.92□□□□□ -0.34
AC004854.1-201ENST00000440356 ARSIQ5FYB1 569 aa12.91□□□□□ -0.34
AC004854.1-201ENST00000440356 PCDHGA4Q9Y5G9 962 aa12.91□□□□□ -0.34
AC004854.1-201ENST00000440356 TBC1D12O60347 775 aa12.9□□□□□ -0.34
AC004854.1-201ENST00000440356 HOXB1P14653 301 aaPredicted RBP12.9□□□□□ -0.34
AC004854.1-201ENST00000440356 PTCD2Q8WV60 388 aaKnown RBP12.9□□□□□ -0.34
AC004854.1-201ENST00000440356 GPR153Q6NV75 609 aa12.89□□□□□ -0.35
AC004854.1-201ENST00000440356 E2F4Q16254 413 aa12.88□□□□□ -0.35
AC004854.1-201ENST00000440356 CAMK2BQ13554 666 aa12.87□□□□□ -0.35
AC004854.1-201ENST00000440356 OXER1Q8TDS5 423 aa12.87□□□□□ -0.35
AC004854.1-201ENST00000440356 KHSRPQ92945 711 aaKnown RBP eCLIP12.87□□□□□ -0.35
AC004854.1-201ENST00000440356 MARVELD3Q96A59 401 aa12.87□□□□□ -0.35
AC004854.1-201ENST00000440356 EMP3P54852 163 aa12.86□□□□□ -0.35
AC004854.1-201ENST00000440356 EMILIN3Q9NT22 766 aa12.86□□□□□ -0.35
AC004854.1-201ENST00000440356 NUDT7P0C024 238 aa12.84□□□□□ -0.35
AC004854.1-201ENST00000440356 MAP3K9P80192 1104 aa12.84□□□□□ -0.35
AC004854.1-201ENST00000440356 VSIG10Q8N0Z9 540 aa12.84□□□□□ -0.35
AC004854.1-201ENST00000440356 KDM2AQ9Y2K7 1162 aa12.81□□□□□ -0.36
AC004854.1-201ENST00000440356 ZNF316A6NFI3 1004 aaPredicted RBP12.8□□□□□ -0.36
AC004854.1-201ENST00000440356 POTEMA6NI47 508 aa12.8□□□□□ -0.36
AC004854.1-201ENST00000440356 DPYSL4O14531 572 aa12.79□□□□□ -0.36
AC004854.1-201ENST00000440356 POTEGQ6S5H5 508 aa12.79□□□□□ -0.36
AC004854.1-201ENST00000440356 ERBB3P21860 1342 aa12.79□□□□□ -0.36
AC004854.1-201ENST00000440356 FAM205CA6NFA0 338 aa12.77□□□□□ -0.37
AC004854.1-201ENST00000440356 EVI5O60447 810 aa12.76□□□□□ -0.37
AC004854.1-201ENST00000440356 P3H3Q8IVL6 736 aa12.76□□□□□ -0.37
AC004854.1-201ENST00000440356 KCNV2Q8TDN2 545 aa12.75□□□□□ -0.37
AC004854.1-201ENST00000440356 LHX6Q9UPM6 363 aa12.74□□□□□ -0.37
AC004854.1-201ENST00000440356 VARS2Q5ST30 1063 aaKnown RBP12.73□□□□□ -0.37
AC004854.1-201ENST00000440356 KDM4FA0A1W2PPD8 638 aa12.72□□□□□ -0.37
AC004854.1-201ENST00000440356 HS3ST6Q96QI5 342 aa12.72□□□□□ -0.37
AC004854.1-201ENST00000440356 ARIH1Q9Y4X5 557 aaPredicted RBP12.71□□□□□ -0.37
AC004854.1-201ENST00000440356 ARHGEF1Q92888 912 aaKnown RBP12.7□□□□□ -0.38
AC004854.1-201ENST00000440356 PSDA5PKW4 1024 aaPredicted RBP12.68□□□□□ -0.38
AC004854.1-201ENST00000440356 SPDYE16A6NNV3 312 aaPredicted RBP12.67□□□□□ -0.38
AC004854.1-201ENST00000440356 SLC24A1O60721 1099 aa12.67□□□□□ -0.38
AC004854.1-201ENST00000440356 PDIA6Q15084 440 aa12.67□□□□□ -0.38
AC004854.1-201ENST00000440356 ANO8Q9HCE9 1232 aaPredicted RBP12.67□□□□□ -0.38
AC004854.1-201ENST00000440356 POTEB3A0JP26 581 aa12.65□□□□□ -0.38
AC004854.1-201ENST00000440356 POTEBQ6S5H4 581 aa12.65□□□□□ -0.38
AC004854.1-201ENST00000440356 ZNF454Q8N9F8 522 aa12.64□□□□□ -0.39
AC004854.1-201ENST00000440356 PPP4R3BQ5MIZ7 849 aa12.63□□□□□ -0.39
AC004854.1-201ENST00000440356 CDAN1Q8IWY9 1227 aa12.61□□□□□ -0.39
AC004854.1-201ENST00000440356 JPH4Q96JJ6 628 aa12.61□□□□□ -0.39
AC004854.1-201ENST00000440356 ZNF687Q8N1G0 1237 aa12.6□□□□□ -0.39
AC004854.1-201ENST00000440356 DDX12PQ92771 950 aa12.6□□□□□ -0.39
AC004854.1-201ENST00000440356 FOSBP53539 338 aa12.59□□□□□ -0.39
AC004854.1-201ENST00000440356 PHF14O94880 888 aa12.57□□□□□ -0.4
AC004854.1-201ENST00000440356 PTGER2P43116 358 aa12.57□□□□□ -0.4
AC004854.1-201ENST00000440356 GRXCR2A6NFK2 248 aa12.55□□□□□ -0.4
AC004854.1-201ENST00000440356 ZDHHC16Q969W1 377 aa12.55□□□□□ -0.4
AC004854.1-201ENST00000440356 PCDH10Q9P2E7 1040 aa12.55□□□□□ -0.4
AC004854.1-201ENST00000440356 PCDHGA10Q9Y5H3 936 aa12.55□□□□□ -0.4
AC004854.1-201ENST00000440356 NBR1Q14596 966 aa12.54□□□□□ -0.4
AC004854.1-201ENST00000440356 TYW1BQ6NUM6 668 aa12.54□□□□□ -0.4
AC004854.1-201ENST00000440356 EPAS1Q99814 870 aa12.53□□□□□ -0.4
AC004854.1-201ENST00000440356 FBXW7Q969H0 707 aa12.52□□□□□ -0.41
AC004854.1-201ENST00000440356 KCNH8Q96L42 1107 aa12.52□□□□□ -0.41
AC004854.1-201ENST00000440356 PBX2P40425 430 aa12.51□□□□□ -0.41
AC004854.1-201ENST00000440356 SEMA3EO15041 775 aa12.5□□□□□ -0.41
AC004854.1-201ENST00000440356 ADAM33Q9BZ11 813 aa12.5□□□□□ -0.41
AC004854.1-201ENST00000440356 MLLT3P42568 568 aaPredicted RBP12.49□□□□□ -0.41
AC004854.1-201ENST00000440356 BCL2L12Q9HB09 334 aa12.49□□□□□ -0.41
AC004854.1-201ENST00000440356 AXIN2Q9Y2T1 843 aa12.49□□□□□ -0.41
AC004854.1-201ENST00000440356 ARHGAP33O14559 1287 aa12.48□□□□□ -0.41
AC004854.1-201ENST00000440356 RBM33Q96EV2 1170 aaKnown RBP12.48□□□□□ -0.41
AC004854.1-201ENST00000440356 KCNK17Q96T54 332 aa12.48□□□□□ -0.41
AC004854.1-201ENST00000440356 PTPREP23469 700 aa12.47□□□□□ -0.41
AC004854.1-201ENST00000440356 KRTAP3-3Q9BYR6 98 aa12.47□□□□□ -0.41
AC004854.1-201ENST00000440356 KRTAP3-2Q9BYR7 98 aa12.47□□□□□ -0.41
AC004854.1-201ENST00000440356 POTEEQ6S8J3 1075 aa12.46□□□□□ -0.41
AC004854.1-201ENST00000440356 MAP3K7O43318 606 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms