RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 ADAMTSL3P82987 1691 aa29.94■■■□□ 2.38
AC004540.1-201ENST00000439120 BCORL1Q5H9F3 1711 aa29.93■■■□□ 2.38
AC004540.1-201ENST00000439120 ZFYVE16Q7Z3T8 1539 aa29.92■■■□□ 2.38
AC004540.1-201ENST00000439120 ARHGAP5Q13017 1502 aa29.91■■■□□ 2.38
AC004540.1-201ENST00000439120 POGZQ7Z3K3 1410 aa29.9■■■□□ 2.38
AC004540.1-201ENST00000439120 MAGI2Q86UL8 1455 aa29.89■■■□□ 2.38
AC004540.1-201ENST00000439120 FYCO1Q9BQS8 1478 aa29.89■■■□□ 2.38
AC004540.1-201ENST00000439120 PTPRMP28827 1452 aa29.87■■■□□ 2.37
AC004540.1-201ENST00000439120 MADDQ8WXG6 1647 aa29.85■■■□□ 2.37
AC004540.1-201ENST00000439120 YEATS2Q9ULM3 1422 aa29.85■■■□□ 2.37
AC004540.1-201ENST00000439120 ZNF518AQ6AHZ1 1483 aa29.79■■■□□ 2.36
AC004540.1-201ENST00000439120 CDC42BPBQ9Y5S2 1711 aa29.78■■■□□ 2.36
AC004540.1-201ENST00000439120 PREX2Q70Z35 1606 aa29.78■■■□□ 2.36
AC004540.1-201ENST00000439120 RIMS1Q86UR5 1692 aaKnown RBP29.77■■■□□ 2.36
AC004540.1-201ENST00000439120 MYT1LQ9UL68 1186 aa29.75■■■□□ 2.35
AC004540.1-201ENST00000439120 SIGLEC1Q9BZZ2 1709 aa29.73■■■□□ 2.35
AC004540.1-201ENST00000439120 ATP10AO60312 1499 aa29.73■■■□□ 2.35
AC004540.1-201ENST00000439120 C9orf84Q5VXU9 1444 aa29.71■■■□□ 2.35
AC004540.1-201ENST00000439120 MLECQ14165 292 aa29.71■■■□□ 2.35
AC004540.1-201ENST00000439120 AFAP1Q8N556 730 aa29.7■■■□□ 2.35
AC004540.1-201ENST00000439120 KDM5CP41229 1560 aa29.69■■■□□ 2.34
AC004540.1-201ENST00000439120 CDC42BPAQ5VT25 1732 aa29.69■■■□□ 2.34
AC004540.1-201ENST00000439120 ABCC1P33527 1531 aa29.66■■■□□ 2.34
AC004540.1-201ENST00000439120 FER1L4A9Z1Z3 1794 aa29.65■■■□□ 2.34
AC004540.1-201ENST00000439120 PLPPR3Q6T4P5 718 aa29.65■■■□□ 2.34
AC004540.1-201ENST00000439120 ITSN2Q9NZM3 1697 aa29.64■■■□□ 2.34
AC004540.1-201ENST00000439120 CEP162Q5TB80 1403 aa29.63■■■□□ 2.33
AC004540.1-201ENST00000439120 MTUS2Q5JR59 1369 aa29.62■■■□□ 2.33
AC004540.1-201ENST00000439120 ZNF777Q9ULD5 760 aaPredicted RBP29.61■■■□□ 2.33
AC004540.1-201ENST00000439120 TRAPPC8Q9Y2L5 1435 aa29.59■■■□□ 2.33
AC004540.1-201ENST00000439120 MLH3Q9UHC1 1453 aa29.59■■■□□ 2.33
AC004540.1-201ENST00000439120 DIP2CQ9Y2E4 1556 aa29.59■■■□□ 2.33
AC004540.1-201ENST00000439120 ARHGEF12Q9NZN5 1544 aa29.58■■■□□ 2.33
AC004540.1-201ENST00000439120 GPATCH8Q9UKJ3 1502 aaKnown RBP29.56■■■□□ 2.32
AC004540.1-201ENST00000439120 ABCA6Q8N139 1617 aa29.56■■■□□ 2.32
AC004540.1-201ENST00000439120 CCNB3Q8WWL7 1395 aa29.55■■■□□ 2.32
AC004540.1-201ENST00000439120 SAMD9LQ8IVG5 1584 aa29.54■■■□□ 2.32
AC004540.1-201ENST00000439120 LMTK3Q96Q04 1460 aa29.54■■■□□ 2.32
AC004540.1-201ENST00000439120 REREQ9P2R6 1566 aa29.53■■■□□ 2.32
AC004540.1-201ENST00000439120 CFDP1Q9UEE9 299 aaPredicted RBP29.52■■■□□ 2.32
AC004540.1-201ENST00000439120 SYCP2Q9BX26 1530 aa29.51■■■□□ 2.32
AC004540.1-201ENST00000439120 EHBP1L1Q8N3D4 1523 aa29.5■■■□□ 2.31
AC004540.1-201ENST00000439120 KIDINS220Q9ULH0 1771 aa29.48■■■□□ 2.31
AC004540.1-201ENST00000439120 PLEKHH2Q8IVE3 1493 aa29.48■■■□□ 2.31
AC004540.1-201ENST00000439120 HNRNPMP52272 730 aaKnown RBP eCLIP29.45■■■□□ 2.31
AC004540.1-201ENST00000439120 ILDR1Q86SU0 546 aaPredicted RBP29.45■■■□□ 2.31
AC004540.1-201ENST00000439120 SPAG9O60271 1321 aaKnown RBP29.44■■■□□ 2.3
AC004540.1-201ENST00000439120 ESF1Q9H501 851 aaKnown RBP29.43■■■□□ 2.3
AC004540.1-201ENST00000439120 AGLP35573 1532 aa29.43■■■□□ 2.3
AC004540.1-201ENST00000439120 KIAA1107Q9UPP5 1409 aa29.42■■■□□ 2.3
AC004540.1-201ENST00000439120 TIAM1Q13009 1591 aa29.41■■■□□ 2.3
AC004540.1-201ENST00000439120 HSPA2P54652 639 aa29.4■■■□□ 2.3
AC004540.1-201ENST00000439120 LOC105371045A0A1W2PR82 267 aa29.39■■■□□ 2.3
AC004540.1-201ENST00000439120 CEBPAP49715 358 aaPredicted RBP29.38■■■□□ 2.29
AC004540.1-201ENST00000439120 ATP7AQ04656 1500 aa29.37■■■□□ 2.29
AC004540.1-201ENST00000439120 PREX1Q8TCU6 1659 aa29.37■■■□□ 2.29
AC004540.1-201ENST00000439120 SUPT6HQ7KZ85 1726 aaKnown RBP29.34■■■□□ 2.29
AC004540.1-201ENST00000439120 INO80Q9ULG1 1556 aaPredicted RBP29.34■■■□□ 2.29
AC004540.1-201ENST00000439120 VPS8Q8N3P4 1428 aa29.31■■■□□ 2.28
AC004540.1-201ENST00000439120 ZNF644Q9H582 1327 aaPredicted RBP29.3■■■□□ 2.28
AC004540.1-201ENST00000439120 C3P01024 1663 aa29.3■■■□□ 2.28
AC004540.1-201ENST00000439120 NCOA2Q15596 1464 aa29.29■■■□□ 2.28
AC004540.1-201ENST00000439120 CNTLNQ9NXG0 1405 aa29.28■■■□□ 2.28
AC004540.1-201ENST00000439120 UHRF1BP1Q6BDS2 1440 aa29.28■■■□□ 2.28
AC004540.1-201ENST00000439120 A2MP01023 1474 aa29.26■■■□□ 2.27
AC004540.1-201ENST00000439120 SETD1BQ9UPS6 1966 aaKnown RBP29.24■■■□□ 2.27
AC004540.1-201ENST00000439120 ADGBQ8N7X0 1667 aa29.23■■■□□ 2.27
AC004540.1-201ENST00000439120 MBD5Q9P267 1494 aa29.23■■■□□ 2.27
AC004540.1-201ENST00000439120 PLXNC1O60486 1568 aa29.22■■■□□ 2.27
AC004540.1-201ENST00000439120 CAMSAP2Q08AD1 1489 aa29.2■■■□□ 2.26
AC004540.1-201ENST00000439120 MROH2AA6NES4 1674 aa29.19■■■□□ 2.26
AC004540.1-201ENST00000439120 LRRC9Q6ZRR7 1453 aa29.19■■■□□ 2.26
AC004540.1-201ENST00000439120 CCDC141Q6ZP82 1450 aa29.17■■■□□ 2.26
AC004540.1-201ENST00000439120 RTEL1-TNFRSF6BF6WH68 1400 aa29.17■■■□□ 2.26
AC004540.1-201ENST00000439120 GGT6Q6P531 493 aa29.15■■■□□ 2.26
AC004540.1-201ENST00000439120 CLTCQ00610 1675 aaKnown RBP29.15■■■□□ 2.26
AC004540.1-201ENST00000439120 RSPH4AQ5TD94 716 aa29.14■■■□□ 2.26
AC004540.1-201ENST00000439120 FBXO41Q8TF61 875 aa29.14■■■□□ 2.26
AC004540.1-201ENST00000439120 MAP3K1Q13233 1512 aa29.12■■■□□ 2.25
AC004540.1-201ENST00000439120 ZMYM3Q14202 1370 aa29.12■■■□□ 2.25
AC004540.1-201ENST00000439120 NPATQ14207 1427 aa29.1■■■□□ 2.25
AC004540.1-201ENST00000439120 DMRT2Q9Y5R5 561 aa29.09■■■□□ 2.25
AC004540.1-201ENST00000439120 ARHGEF5Q12774 1597 aa29.07■■■□□ 2.24
AC004540.1-201ENST00000439120 DHX29Q7Z478 1369 aaKnown RBP29.07■■■□□ 2.24
AC004540.1-201ENST00000439120 PPP6R1Q9UPN7 881 aa29.07■■■□□ 2.24
AC004540.1-201ENST00000439120 STRCQ7RTU9 1775 aa29.06■■■□□ 2.24
AC004540.1-201ENST00000439120 TSPY4P0CV99 314 aa29.06■■■□□ 2.24
AC004540.1-201ENST00000439120 TSPY10P0CW01 314 aa29.06■■■□□ 2.24
AC004540.1-201ENST00000439120 APLP2Q06481 763 aa29.06■■■□□ 2.24
AC004540.1-201ENST00000439120 KANK4Q5T7N3 995 aaPredicted RBP29.06■■■□□ 2.24
AC004540.1-201ENST00000439120 KIF3BO15066 747 aa29■■■□□ 2.23
AC004540.1-201ENST00000439120 MYOM3Q5VTT5 1437 aa29■■■□□ 2.23
AC004540.1-201ENST00000439120 MIA2Q96PC5 1412 aa28.97■■■□□ 2.23
AC004540.1-201ENST00000439120 CERKQ8TCT0 537 aa28.97■■■□□ 2.23
AC004540.1-201ENST00000439120 PTPRKQ15262 1439 aa28.96■■■□□ 2.23
AC004540.1-201ENST00000439120 MYO3AQ8NEV4 1616 aa28.96■■■□□ 2.23
AC004540.1-201ENST00000439120 CAMSAP1Q5T5Y3 1602 aa28.94■■■□□ 2.22
AC004540.1-201ENST00000439120 KDM5DQ9BY66 1539 aa28.93■■■□□ 2.22
AC004540.1-201ENST00000439120 PTPRTO14522 1441 aa28.93■■■□□ 2.22
AC004540.1-201ENST00000439120 NCOA1Q15788 1441 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms