RNA–Protein interactions for RNA: ENST00000438446.1

FYCO1-203, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

TSL 5 BASIC

Gene FYCO1, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-203ENST00000438446 EHMT2Q96KQ7 1210 aa26.11■■□□□ 1.77
FYCO1-203ENST00000438446 LMTK3Q96Q04 1460 aa26.1■■□□□ 1.77
FYCO1-203ENST00000438446 PCF11O94913 1555 aaKnown RBP26.09■■□□□ 1.77
FYCO1-203ENST00000438446 POGZQ7Z3K3 1410 aa26.09■■□□□ 1.77
FYCO1-203ENST00000438446 SCAPERQ9BY12 1400 aa26.09■■□□□ 1.77
FYCO1-203ENST00000438446 CDC42BPBQ9Y5S2 1711 aa26.05■■□□□ 1.76
FYCO1-203ENST00000438446 FER1L4A9Z1Z3 1794 aa26.04■■□□□ 1.76
FYCO1-203ENST00000438446 TROQ12816 1431 aaPredicted RBP26.04■■□□□ 1.76
FYCO1-203ENST00000438446 ATP1B4Q9UN42 357 aaPredicted RBP26.02■■□□□ 1.76
FYCO1-203ENST00000438446 EFCAB2Q5VUJ9 269 aa26.01■■□□□ 1.75
FYCO1-203ENST00000438446 CDK11AQ9UQ88 783 aaPredicted RBP26■■□□□ 1.75
FYCO1-203ENST00000438446 ATP10AO60312 1499 aa25.99■■□□□ 1.75
FYCO1-203ENST00000438446 KDM5CP41229 1560 aa25.98■■□□□ 1.75
FYCO1-203ENST00000438446 ARHGEF12Q9NZN5 1544 aa25.97■■□□□ 1.75
FYCO1-203ENST00000438446 C9orf84Q5VXU9 1444 aa25.94■■□□□ 1.74
FYCO1-203ENST00000438446 ARHGAP5Q13017 1502 aa25.93■■□□□ 1.74
FYCO1-203ENST00000438446 ZNF518AQ6AHZ1 1483 aa25.92■■□□□ 1.74
FYCO1-203ENST00000438446 CASKIN1Q8WXD9 1431 aa25.92■■□□□ 1.74
FYCO1-203ENST00000438446 PREX2Q70Z35 1606 aa25.92■■□□□ 1.74
FYCO1-203ENST00000438446 CLIP1P30622 1438 aa25.91■■□□□ 1.74
FYCO1-203ENST00000438446 CDC42BPAQ5VT25 1732 aa25.91■■□□□ 1.74
FYCO1-203ENST00000438446 AFAP1Q8N556 730 aa25.9■■□□□ 1.74
FYCO1-203ENST00000438446 MLECQ14165 292 aa25.89■■□□□ 1.74
FYCO1-203ENST00000438446 FBXO41Q8TF61 875 aa25.89■■□□□ 1.74
FYCO1-203ENST00000438446 DIP2CQ9Y2E4 1556 aa25.88■■□□□ 1.73
FYCO1-203ENST00000438446 SETD1BQ9UPS6 1966 aaKnown RBP25.87■■□□□ 1.73
FYCO1-203ENST00000438446 REREQ9P2R6 1566 aa25.87■■□□□ 1.73
FYCO1-203ENST00000438446 CCDC18Q5T9S5 1454 aa25.87■■□□□ 1.73
FYCO1-203ENST00000438446 ITSN2Q9NZM3 1697 aa25.87■■□□□ 1.73
FYCO1-203ENST00000438446 HSPA2P54652 639 aa25.86■■□□□ 1.73
FYCO1-203ENST00000438446 ABCA6Q8N139 1617 aa25.85■■□□□ 1.73
FYCO1-203ENST00000438446 MLH3Q9UHC1 1453 aa25.85■■□□□ 1.73
FYCO1-203ENST00000438446 ABCC1P33527 1531 aa25.84■■□□□ 1.73
FYCO1-203ENST00000438446 PREX1Q8TCU6 1659 aa25.83■■□□□ 1.73
FYCO1-203ENST00000438446 PLPPR3Q6T4P5 718 aa25.82■■□□□ 1.72
FYCO1-203ENST00000438446 KIDINS220Q9ULH0 1771 aa25.82■■□□□ 1.72
FYCO1-203ENST00000438446 TRAPPC8Q9Y2L5 1435 aa25.81■■□□□ 1.72
FYCO1-203ENST00000438446 FYCO1Q9BQS8 1478 aa25.79■■□□□ 1.72
FYCO1-203ENST00000438446 STRCQ7RTU9 1775 aa25.77■■□□□ 1.72
FYCO1-203ENST00000438446 AGLP35573 1532 aa25.77■■□□□ 1.72
FYCO1-203ENST00000438446 CEBPAP49715 358 aaPredicted RBP25.76■■□□□ 1.71
FYCO1-203ENST00000438446 C3P01024 1663 aa25.76■■□□□ 1.71
FYCO1-203ENST00000438446 SAMD9LQ8IVG5 1584 aa25.73■■□□□ 1.71
FYCO1-203ENST00000438446 GPATCH8Q9UKJ3 1502 aaKnown RBP25.7■■□□□ 1.7
FYCO1-203ENST00000438446 MYT1LQ9UL68 1186 aa25.65■■□□□ 1.7
FYCO1-203ENST00000438446 SYCP2Q9BX26 1530 aa25.63■■□□□ 1.69
FYCO1-203ENST00000438446 CERKQ8TCT0 537 aa25.6■■□□□ 1.69
FYCO1-203ENST00000438446 MROH2AA6NES4 1674 aa25.6■■□□□ 1.69
FYCO1-203ENST00000438446 UHRF1BP1Q6BDS2 1440 aa25.6■■□□□ 1.69
FYCO1-203ENST00000438446 SUPT6HQ7KZ85 1726 aaKnown RBP25.6■■□□□ 1.69
FYCO1-203ENST00000438446 KIAA1107Q9UPP5 1409 aa25.59■■□□□ 1.69
FYCO1-203ENST00000438446 HNRNPMP52272 730 aaKnown RBP eCLIP25.58■■□□□ 1.69
FYCO1-203ENST00000438446 INO80Q9ULG1 1556 aaPredicted RBP25.57■■□□□ 1.68
FYCO1-203ENST00000438446 ZNF777Q9ULD5 760 aaPredicted RBP25.56■■□□□ 1.68
FYCO1-203ENST00000438446 PLXNC1O60486 1568 aa25.55■■□□□ 1.68
FYCO1-203ENST00000438446 CNTLNQ9NXG0 1405 aa25.54■■□□□ 1.68
FYCO1-203ENST00000438446 ATP7AQ04656 1500 aa25.54■■□□□ 1.68
FYCO1-203ENST00000438446 SPAG9O60271 1321 aaKnown RBP25.52■■□□□ 1.68
FYCO1-203ENST00000438446 PLEKHH2Q8IVE3 1493 aa25.52■■□□□ 1.68
FYCO1-203ENST00000438446 TIAM1Q13009 1591 aa25.52■■□□□ 1.68
FYCO1-203ENST00000438446 CCNB3Q8WWL7 1395 aa25.5■■□□□ 1.67
FYCO1-203ENST00000438446 CFDP1Q9UEE9 299 aaPredicted RBP25.5■■□□□ 1.67
FYCO1-203ENST00000438446 DMRT2Q9Y5R5 561 aa25.5■■□□□ 1.67
FYCO1-203ENST00000438446 PTPRTO14522 1441 aa25.49■■□□□ 1.67
FYCO1-203ENST00000438446 CLTCQ00610 1675 aaKnown RBP25.48■■□□□ 1.67
FYCO1-203ENST00000438446 ADGBQ8N7X0 1667 aa25.48■■□□□ 1.67
FYCO1-203ENST00000438446 MTUS2Q5JR59 1369 aa25.47■■□□□ 1.67
FYCO1-203ENST00000438446 A2MP01023 1474 aa25.47■■□□□ 1.67
FYCO1-203ENST00000438446 MBD5Q9P267 1494 aa25.47■■□□□ 1.67
FYCO1-203ENST00000438446 NPATQ14207 1427 aa25.46■■□□□ 1.67
FYCO1-203ENST00000438446 ZMYM3Q14202 1370 aa25.46■■□□□ 1.67
FYCO1-203ENST00000438446 ESF1Q9H501 851 aaKnown RBP25.46■■□□□ 1.67
FYCO1-203ENST00000438446 EHBP1L1Q8N3D4 1523 aa25.45■■□□□ 1.66
FYCO1-203ENST00000438446 ZNF644Q9H582 1327 aaPredicted RBP25.44■■□□□ 1.66
FYCO1-203ENST00000438446 NCOA1Q15788 1441 aa25.43■■□□□ 1.66
FYCO1-203ENST00000438446 CEP162Q5TB80 1403 aa25.42■■□□□ 1.66
FYCO1-203ENST00000438446 LTBP4Q8N2S1 1624 aa25.41■■□□□ 1.66
FYCO1-203ENST00000438446 ZNF142P52746 1687 aaPredicted RBP25.4■■□□□ 1.66
FYCO1-203ENST00000438446 CAMSAP1Q5T5Y3 1602 aa25.39■■□□□ 1.66
FYCO1-203ENST00000438446 RTEL1-TNFRSF6BF6WH68 1400 aa25.37■■□□□ 1.65
FYCO1-203ENST00000438446 MYO3AQ8NEV4 1616 aa25.37■■□□□ 1.65
FYCO1-203ENST00000438446 PTPRKQ15262 1439 aa25.37■■□□□ 1.65
FYCO1-203ENST00000438446 PPP6R1Q9UPN7 881 aa25.34■■□□□ 1.65
FYCO1-203ENST00000438446 GGT6Q6P531 493 aa25.32■■□□□ 1.64
FYCO1-203ENST00000438446 DHX29Q7Z478 1369 aaKnown RBP25.31■■□□□ 1.64
FYCO1-203ENST00000438446 NCOA2Q15596 1464 aa25.3■■□□□ 1.64
FYCO1-203ENST00000438446 CEP170BQ9Y4F5 1589 aaPredicted RBP25.3■■□□□ 1.64
FYCO1-203ENST00000438446 PLA2R1Q13018 1463 aa25.28■■□□□ 1.64
FYCO1-203ENST00000438446 IQSEC2Q5JU85 1478 aa25.27■■□□□ 1.64
FYCO1-203ENST00000438446 NCKAP5LQ9HCH0 1330 aa25.26■■□□□ 1.63
FYCO1-203ENST00000438446 CAMSAP2Q08AD1 1489 aa25.26■■□□□ 1.63
FYCO1-203ENST00000438446 TCOF1Q13428 1488 aaKnown RBP25.26■■□□□ 1.63
FYCO1-203ENST00000438446 CCDC141Q6ZP82 1450 aa25.25■■□□□ 1.63
FYCO1-203ENST00000438446 DNMT1P26358 1616 aaKnown RBP25.23■■□□□ 1.63
FYCO1-203ENST00000438446 ARHGEF5Q12774 1597 aa25.23■■□□□ 1.63
FYCO1-203ENST00000438446 RSPH4AQ5TD94 716 aa25.22■■□□□ 1.63
FYCO1-203ENST00000438446 FAM135AQ9P2D6 1515 aa25.19■■□□□ 1.62
FYCO1-203ENST00000438446 PKD2Q13563 968 aa25.19■■□□□ 1.62
FYCO1-203ENST00000438446 A2ML1A8K2U0 1454 aa25.19■■□□□ 1.62
FYCO1-203ENST00000438446 LRRC9Q6ZRR7 1453 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms