RNA–Protein interactions for RNA: ENST00000438446.1

FYCO1-203, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

TSL 5 BASIC

Gene FYCO1, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-203ENST00000438446 NISCHQ9Y2I1 1504 aa39.91■■■■□ 3.98
FYCO1-203ENST00000438446 CCDC180Q9P1Z9 1646 aa35.88■■■■□ 3.33
FYCO1-203ENST00000438446 ABCC9O60706 1549 aa35.83■■■■□ 3.33
FYCO1-203ENST00000438446 RB1CC1Q8TDY2 1594 aa34.11■■■■□ 3.05
FYCO1-203ENST00000438446 NACADO15069 1562 aa33.89■■■■□ 3.02
FYCO1-203ENST00000438446 DNAJC5BQ9UF47 199 aa33.78■■■■□ 3
FYCO1-203ENST00000438446 UNC13AQ9UPW8 1703 aa33.56■■■□□ 2.96
FYCO1-203ENST00000438446 DCAF8L2P0C7V8 631 aa33.49■■■□□ 2.95
FYCO1-203ENST00000438446 MYO15BQ96JP2 1530 aa33.45■■■□□ 2.95
FYCO1-203ENST00000438446 PABPN1Q86U42 306 aaKnown RBP eCLIP33.32■■■□□ 2.92
FYCO1-203ENST00000438446 BICRAQ9NZM4 1560 aa33.24■■■□□ 2.91
FYCO1-203ENST00000438446 ZCCHC6Q5VYS8 1495 aaKnown RBP33.05■■■□□ 2.88
FYCO1-203ENST00000438446 DCAF1Q9Y4B6 1507 aa33■■■□□ 2.87
FYCO1-203ENST00000438446 SHROOM4Q9ULL8 1493 aa32.67■■■□□ 2.82
FYCO1-203ENST00000438446 SCRIBQ14160 1630 aa32.59■■■□□ 2.81
FYCO1-203ENST00000438446 CC2D2AQ9P2K1 1620 aa32.44■■■□□ 2.78
FYCO1-203ENST00000438446 EIF4G1Q04637 1599 aaKnown RBP32.35■■■□□ 2.77
FYCO1-203ENST00000438446 CECR2Q9BXF3 1484 aa32.28■■■□□ 2.76
FYCO1-203ENST00000438446 NCAPD3P42695 1498 aa31.3■■■□□ 2.6
FYCO1-203ENST00000438446 ATAD2BQ9ULI0 1458 aa31.18■■■□□ 2.58
FYCO1-203ENST00000438446 SMARCA4P51532 1647 aa31.15■■■□□ 2.58
FYCO1-203ENST00000438446 SMARCA2P51531 1590 aa31.05■■■□□ 2.56
FYCO1-203ENST00000438446 HMGXB3Q12766 1538 aa31.05■■■□□ 2.56
FYCO1-203ENST00000438446 DNAJC5Q9H3Z4 198 aa31.02■■■□□ 2.56
FYCO1-203ENST00000438446 BAZ1AQ9NRL2 1556 aaPredicted RBP30.94■■■□□ 2.54
FYCO1-203ENST00000438446 CUX2O14529 1486 aa30.93■■■□□ 2.54
FYCO1-203ENST00000438446 PEG3Q9GZU2 1588 aa30.9■■■□□ 2.54
FYCO1-203ENST00000438446 ERCC6Q03468 1493 aa30.85■■■□□ 2.53
FYCO1-203ENST00000438446 NESP48681 1621 aa30.81■■■□□ 2.52
FYCO1-203ENST00000438446 BAZ1BQ9UIG0 1483 aaKnown RBP30.8■■■□□ 2.52
FYCO1-203ENST00000438446 MROH2BQ7Z745 1585 aa30.75■■■□□ 2.51
FYCO1-203ENST00000438446 LAMC3Q9Y6N6 1575 aa30.59■■■□□ 2.49
FYCO1-203ENST00000438446 THOC2Q8NI27 1593 aaKnown RBP30.56■■■□□ 2.48
FYCO1-203ENST00000438446 KIF21AQ7Z4S6 1674 aa30.49■■■□□ 2.47
FYCO1-203ENST00000438446 WIZO95785 1651 aa30.41■■■□□ 2.46
FYCO1-203ENST00000438446 PDS5BQ9NTI5 1447 aa30.33■■■□□ 2.45
FYCO1-203ENST00000438446 CADPSQ9ULU8 1353 aa30.29■■■□□ 2.44
FYCO1-203ENST00000438446 MRC2Q9UBG0 1479 aa30.1■■■□□ 2.41
FYCO1-203ENST00000438446 WDR62O43379 1518 aa30.09■■■□□ 2.41
FYCO1-203ENST00000438446 RSF1Q96T23 1441 aaPredicted RBP30.07■■■□□ 2.4
FYCO1-203ENST00000438446 CFTRP13569 1480 aa29.98■■■□□ 2.39
FYCO1-203ENST00000438446 TOP2AP11388 1531 aaKnown RBP29.96■■■□□ 2.39
FYCO1-203ENST00000438446 CEP164Q9UPV0 1460 aa29.95■■■□□ 2.39
FYCO1-203ENST00000438446 FANCD2Q9BXW9 1451 aa29.93■■■□□ 2.38
FYCO1-203ENST00000438446 PRDM2Q13029 1718 aa29.79■■■□□ 2.36
FYCO1-203ENST00000438446 URB2Q14146 1524 aaKnown RBP29.75■■■□□ 2.35
FYCO1-203ENST00000438446 CCDC88BA6NC98 1476 aa29.63■■■□□ 2.33
FYCO1-203ENST00000438446 TRIM41Q8WV44 630 aa29.47■■■□□ 2.31
FYCO1-203ENST00000438446 OSCARQ8IYS5 282 aa29.46■■■□□ 2.31
FYCO1-203ENST00000438446 TOPBP1Q92547 1522 aa29.4■■■□□ 2.3
FYCO1-203ENST00000438446 ZNF608Q9ULD9 1512 aaPredicted RBP29.38■■■□□ 2.29
FYCO1-203ENST00000438446 IFT140Q96RY7 1462 aa29.37■■■□□ 2.29
FYCO1-203ENST00000438446 ABCC8Q09428 1581 aa29.3■■■□□ 2.28
FYCO1-203ENST00000438446 DNMBPQ6XZF7 1577 aa29.28■■■□□ 2.28
FYCO1-203ENST00000438446 TARBP1Q13395 1621 aaKnown RBP29.22■■■□□ 2.27
FYCO1-203ENST00000438446 EIF4G3O43432 1585 aaKnown RBP29.22■■■□□ 2.27
FYCO1-203ENST00000438446 RIMBP3CA6NJZ7 1639 aa29.19■■■□□ 2.26
FYCO1-203ENST00000438446 RIMBP3BA6NNM3 1639 aa29.19■■■□□ 2.26
FYCO1-203ENST00000438446 RIMBP3Q9UFD9 1639 aa29.19■■■□□ 2.26
FYCO1-203ENST00000438446 POLA1P09884 1462 aaPredicted RBP29.09■■■□□ 2.25
FYCO1-203ENST00000438446 AQRO60306 1485 aaKnown RBP eCLIP29.08■■■□□ 2.252e-8■■■■■ 52.3
FYCO1-203ENST00000438446 CHD1O14646 1710 aa29.08■■■□□ 2.25
FYCO1-203ENST00000438446 ARHGEF11O15085 1522 aa29.04■■■□□ 2.24
FYCO1-203ENST00000438446 RAD54L2Q9Y4B4 1467 aa28.97■■■□□ 2.23
FYCO1-203ENST00000438446 SOGA1O94964 1423 aa28.92■■■□□ 2.22
FYCO1-203ENST00000438446 CUX1P39880 1505 aa28.89■■■□□ 2.21
FYCO1-203ENST00000438446 WDR97A6NE52 1622 aa28.87■■■□□ 2.21
FYCO1-203ENST00000438446 FGD5Q6ZNL6 1462 aa28.87■■■□□ 2.21
FYCO1-203ENST00000438446 TDRD9Q8NDG6 1382 aaKnown RBP28.86■■■□□ 2.21
FYCO1-203ENST00000438446 ARAP1Q96P48 1450 aa28.77■■■□□ 2.2
FYCO1-203ENST00000438446 FBLN2P98095 1184 aa28.76■■■□□ 2.19
FYCO1-203ENST00000438446 CYB5RLQ6IPT4 315 aa28.76■■■□□ 2.19
FYCO1-203ENST00000438446 SNAPC4Q5SXM2 1469 aa28.76■■■□□ 2.19
FYCO1-203ENST00000438446 CLASP1Q7Z460 1538 aa28.72■■■□□ 2.19
FYCO1-203ENST00000438446 MAGI1Q96QZ7 1491 aaPredicted RBP28.69■■■□□ 2.18
FYCO1-203ENST00000438446 GRIN2BQ13224 1484 aa28.67■■■□□ 2.18
FYCO1-203ENST00000438446 PBRM1Q86U86 1689 aa28.66■■■□□ 2.18
FYCO1-203ENST00000438446 SYNJ1O43426 1573 aa28.61■■■□□ 2.17
FYCO1-203ENST00000438446 SYNJ2O15056 1496 aa28.59■■■□□ 2.17
FYCO1-203ENST00000438446 CHMP7Q8WUX9 453 aaPredicted RBP28.58■■■□□ 2.17
FYCO1-203ENST00000438446 ABCA10Q8WWZ4 1543 aa28.58■■■□□ 2.17
FYCO1-203ENST00000438446 ABCA5Q8WWZ7 1642 aa28.58■■■□□ 2.17
FYCO1-203ENST00000438446 GAPVD1Q14C86 1478 aa28.57■■■□□ 2.16
FYCO1-203ENST00000438446 SUPT5HO00267 1087 aaKnown RBP28.52■■■□□ 2.16
FYCO1-203ENST00000438446 BIVM-ERCC5R4GMW8 1640 aa28.46■■■□□ 2.15
FYCO1-203ENST00000438446 TOP2BQ02880 1626 aa28.41■■■□□ 2.14
FYCO1-203ENST00000438446 TRHP20396 242 aaPredicted RBP28.37■■■□□ 2.13
FYCO1-203ENST00000438446 WRNQ14191 1432 aaPredicted RBP eCLIP28.36■■■□□ 2.13
FYCO1-203ENST00000438446 ADAMTS12P58397 1594 aa28.33■■■□□ 2.12
FYCO1-203ENST00000438446 GRIN2AQ12879 1464 aa28.32■■■□□ 2.12
FYCO1-203ENST00000438446 CEP170Q5SW79 1584 aa28.28■■■□□ 2.12
FYCO1-203ENST00000438446 ERCC6L2Q5T890 1561 aa28.27■■■□□ 2.12
FYCO1-203ENST00000438446 NUP160Q12769 1436 aa28.26■■■□□ 2.12
FYCO1-203ENST00000438446 SHROOM2Q13796 1616 aa28.21■■■□□ 2.11
FYCO1-203ENST00000438446 ERICH3Q5RHP9 1530 aa28.21■■■□□ 2.11
FYCO1-203ENST00000438446 FHAD1B1AJZ9 1412 aa28.19■■■□□ 2.1
FYCO1-203ENST00000438446 RUSC2Q8N2Y8 1516 aa27.93■■■□□ 2.06
FYCO1-203ENST00000438446 KIF13AQ9H1H9 1805 aa27.93■■■□□ 2.06
FYCO1-203ENST00000438446 JPH4Q96JJ6 628 aa27.93■■■□□ 2.06
FYCO1-203ENST00000438446 PRG4Q92954 1404 aaPredicted RBP27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms