RNA–Protein interactions for RNA: ENST00000438265.5

RPE-211, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-211ENST00000438265 LMTK3Q96Q04 1460 aa13.65□□□□□ -0.22
RPE-211ENST00000438265 UBTFP17480 764 aaKnown RBP13.64□□□□□ -0.23
RPE-211ENST00000438265 PLCH2O75038 1416 aa13.64□□□□□ -0.23
RPE-211ENST00000438265 POGZQ7Z3K3 1410 aa13.63□□□□□ -0.23
RPE-211ENST00000438265 SCAPERQ9BY12 1400 aa13.62□□□□□ -0.23
RPE-211ENST00000438265 PREX2Q70Z35 1606 aa13.61□□□□□ -0.23
RPE-211ENST00000438265 ITSN2Q9NZM3 1697 aa13.61□□□□□ -0.23
RPE-211ENST00000438265 ABCA6Q8N139 1617 aa13.61□□□□□ -0.23
RPE-211ENST00000438265 KDM5CP41229 1560 aa13.6□□□□□ -0.23
RPE-211ENST00000438265 FMN1Q68DA7 1419 aa13.6□□□□□ -0.23
RPE-211ENST00000438265 TROQ12816 1431 aaPredicted RBP13.59□□□□□ -0.23
RPE-211ENST00000438265 ATP1B4Q9UN42 357 aaPredicted RBP13.59□□□□□ -0.23
RPE-211ENST00000438265 ARID4BQ4LE39 1312 aaPredicted RBP13.59□□□□□ -0.23
RPE-211ENST00000438265 ARHGEF12Q9NZN5 1544 aa13.59□□□□□ -0.23
RPE-211ENST00000438265 DIP2CQ9Y2E4 1556 aa13.58□□□□□ -0.23
RPE-211ENST00000438265 ARHGAP5Q13017 1502 aa13.57□□□□□ -0.24
RPE-211ENST00000438265 KIDINS220Q9ULH0 1771 aa13.57□□□□□ -0.24
RPE-211ENST00000438265 STRCQ7RTU9 1775 aa13.55□□□□□ -0.24
RPE-211ENST00000438265 MAGI2Q86UL8 1455 aa13.55□□□□□ -0.24
RPE-211ENST00000438265 ABCC1P33527 1531 aa13.55□□□□□ -0.24
RPE-211ENST00000438265 MLECQ14165 292 aa13.55□□□□□ -0.24
RPE-211ENST00000438265 PLPPR3Q6T4P5 718 aa13.55□□□□□ -0.24
RPE-211ENST00000438265 C3P01024 1663 aa13.54□□□□□ -0.24
RPE-211ENST00000438265 HSPA2P54652 639 aa13.54□□□□□ -0.24
RPE-211ENST00000438265 PREX1Q8TCU6 1659 aa13.53□□□□□ -0.24
RPE-211ENST00000438265 CASKIN1Q8WXD9 1431 aa13.53□□□□□ -0.24
RPE-211ENST00000438265 TRAPPC8Q9Y2L5 1435 aa13.53□□□□□ -0.24
RPE-211ENST00000438265 ATP10AO60312 1499 aa13.53□□□□□ -0.24
RPE-211ENST00000438265 SAMD9LQ8IVG5 1584 aa13.53□□□□□ -0.24
RPE-211ENST00000438265 AFAP1Q8N556 730 aa13.52□□□□□ -0.25
RPE-211ENST00000438265 C9orf84Q5VXU9 1444 aa13.52□□□□□ -0.25
RPE-211ENST00000438265 ZNF518AQ6AHZ1 1483 aa13.5□□□□□ -0.25
RPE-211ENST00000438265 REREQ9P2R6 1566 aa13.49□□□□□ -0.25
RPE-211ENST00000438265 CEBPAP49715 358 aaPredicted RBP13.49□□□□□ -0.25
RPE-211ENST00000438265 EFCAB2Q5VUJ9 269 aa13.49□□□□□ -0.25
RPE-211ENST00000438265 SETD1BQ9UPS6 1966 aaKnown RBP13.49□□□□□ -0.25
RPE-211ENST00000438265 SUPT6HQ7KZ85 1726 aaKnown RBP13.48□□□□□ -0.25
RPE-211ENST00000438265 CCDC18Q5T9S5 1454 aa13.48□□□□□ -0.25
RPE-211ENST00000438265 FYCO1Q9BQS8 1478 aa13.48□□□□□ -0.25
RPE-211ENST00000438265 CLIP1P30622 1438 aa13.47□□□□□ -0.25
RPE-211ENST00000438265 SYCP2Q9BX26 1530 aa13.46□□□□□ -0.25
RPE-211ENST00000438265 MLH3Q9UHC1 1453 aa13.45□□□□□ -0.26
RPE-211ENST00000438265 GPATCH8Q9UKJ3 1502 aaKnown RBP13.44□□□□□ -0.26
RPE-211ENST00000438265 INO80Q9ULG1 1556 aaPredicted RBP13.43□□□□□ -0.26
RPE-211ENST00000438265 CDK11AQ9UQ88 783 aaPredicted RBP13.43□□□□□ -0.26
RPE-211ENST00000438265 AGLP35573 1532 aa13.42□□□□□ -0.26
RPE-211ENST00000438265 TIAM1Q13009 1591 aa13.41□□□□□ -0.26
RPE-211ENST00000438265 CLTCQ00610 1675 aaKnown RBP13.41□□□□□ -0.26
RPE-211ENST00000438265 FBXO41Q8TF61 875 aa13.41□□□□□ -0.26
RPE-211ENST00000438265 ADGBQ8N7X0 1667 aa13.4□□□□□ -0.26
RPE-211ENST00000438265 PLXNC1O60486 1568 aa13.39□□□□□ -0.27
RPE-211ENST00000438265 MROH2AA6NES4 1674 aa13.39□□□□□ -0.27
RPE-211ENST00000438265 ATP7AQ04656 1500 aa13.38□□□□□ -0.27
RPE-211ENST00000438265 HNRNPMP52272 730 aaKnown RBP eCLIP13.37□□□□□ -0.27
RPE-211ENST00000438265 MYT1LQ9UL68 1186 aa13.35□□□□□ -0.27
RPE-211ENST00000438265 ZNF777Q9ULD5 760 aaPredicted RBP13.35□□□□□ -0.27
RPE-211ENST00000438265 ZNF644Q9H582 1327 aaPredicted RBP13.35□□□□□ -0.27
RPE-211ENST00000438265 MYO3AQ8NEV4 1616 aa13.32□□□□□ -0.28
RPE-211ENST00000438265 UHRF1BP1Q6BDS2 1440 aa13.32□□□□□ -0.28
RPE-211ENST00000438265 ZNF142P52746 1687 aaPredicted RBP13.32□□□□□ -0.28
RPE-211ENST00000438265 MBD5Q9P267 1494 aa13.32□□□□□ -0.28
RPE-211ENST00000438265 EHBP1L1Q8N3D4 1523 aa13.32□□□□□ -0.28
RPE-211ENST00000438265 CEP162Q5TB80 1403 aa13.31□□□□□ -0.28
RPE-211ENST00000438265 CERKQ8TCT0 537 aa13.3□□□□□ -0.28
RPE-211ENST00000438265 LTBP4Q8N2S1 1624 aa13.3□□□□□ -0.28
RPE-211ENST00000438265 KIAA1107Q9UPP5 1409 aa13.3□□□□□ -0.28
RPE-211ENST00000438265 CAMSAP1Q5T5Y3 1602 aa13.29□□□□□ -0.28
RPE-211ENST00000438265 A2MP01023 1474 aa13.29□□□□□ -0.28
RPE-211ENST00000438265 SPAG9O60271 1321 aaKnown RBP13.28□□□□□ -0.28
RPE-211ENST00000438265 MTUS2Q5JR59 1369 aa13.28□□□□□ -0.28
RPE-211ENST00000438265 CCNB3Q8WWL7 1395 aa13.28□□□□□ -0.28
RPE-211ENST00000438265 CFAP65Q6ZU64 1925 aaKnown RBP13.27□□□□□ -0.28
RPE-211ENST00000438265 NCOA1Q15788 1441 aa13.27□□□□□ -0.29
RPE-211ENST00000438265 CFDP1Q9UEE9 299 aaPredicted RBP13.26□□□□□ -0.29
RPE-211ENST00000438265 NCOA2Q15596 1464 aa13.25□□□□□ -0.29
RPE-211ENST00000438265 PTPRKQ15262 1439 aa13.25□□□□□ -0.29
RPE-211ENST00000438265 ZMYM3Q14202 1370 aa13.25□□□□□ -0.29
RPE-211ENST00000438265 CEP170BQ9Y4F5 1589 aaPredicted RBP13.24□□□□□ -0.29
RPE-211ENST00000438265 CAMSAP2Q08AD1 1489 aa13.24□□□□□ -0.29
RPE-211ENST00000438265 PLEKHH2Q8IVE3 1493 aa13.24□□□□□ -0.29
RPE-211ENST00000438265 CNTLNQ9NXG0 1405 aa13.24□□□□□ -0.29
RPE-211ENST00000438265 LOC105371045A0A1W2PR82 267 aa13.24□□□□□ -0.29
RPE-211ENST00000438265 PTPRTO14522 1441 aa13.23□□□□□ -0.29
RPE-211ENST00000438265 POLR1AO95602 1720 aaPredicted RBP13.23□□□□□ -0.29
RPE-211ENST00000438265 DNMT1P26358 1616 aaKnown RBP13.22□□□□□ -0.29
RPE-211ENST00000438265 NPATQ14207 1427 aa13.22□□□□□ -0.29
RPE-211ENST00000438265 CEP152O94986 1710 aa13.21□□□□□ -0.3
RPE-211ENST00000438265 GGT6Q6P531 493 aa13.2□□□□□ -0.3
RPE-211ENST00000438265 ARHGEF5Q12774 1597 aa13.2□□□□□ -0.3
RPE-211ENST00000438265 NEURL4Q96JN8 1562 aa13.2□□□□□ -0.3
RPE-211ENST00000438265 NCKAP5LQ9HCH0 1330 aa13.19□□□□□ -0.3
RPE-211ENST00000438265 MROH1Q8NDA8 1641 aa13.19□□□□□ -0.3
RPE-211ENST00000438265 TCOF1Q13428 1488 aaKnown RBP13.18□□□□□ -0.3
RPE-211ENST00000438265 CCDC141Q6ZP82 1450 aa13.18□□□□□ -0.3
RPE-211ENST00000438265 RTEL1-TNFRSF6BF6WH68 1400 aa13.18□□□□□ -0.3
RPE-211ENST00000438265 STRCP1A6NGW2 1772 aa13.17□□□□□ -0.3
RPE-211ENST00000438265 LRRC9Q6ZRR7 1453 aa13.17□□□□□ -0.3
RPE-211ENST00000438265 KANK4Q5T7N3 995 aaPredicted RBP13.17□□□□□ -0.3
RPE-211ENST00000438265 ESF1Q9H501 851 aaKnown RBP13.17□□□□□ -0.3
RPE-211ENST00000438265 CROCC2H7BZ55 1655 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms