RNA–Protein interactions for RNA: ENST00000437568.6

PMS2P3-205, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 5

Gene PMS2P3, Length 1,185 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-205ENST00000437568 LOC105371045A0A1W2PR82 267 aa40.44■■■■■ 4.06
PMS2P3-205ENST00000437568 ARHGAP5Q13017 1502 aa40.43■■■■■ 4.06
PMS2P3-205ENST00000437568 ARHGEF40Q8TER5 1519 aa40.43■■■■■ 4.06
PMS2P3-205ENST00000437568 MAGI2Q86UL8 1455 aa40.4■■■■■ 4.06
PMS2P3-205ENST00000437568 YEATS2Q9ULM3 1422 aa40.38■■■■■ 4.05
PMS2P3-205ENST00000437568 ARID4BQ4LE39 1312 aaPredicted RBP40.36■■■■■ 4.05
PMS2P3-205ENST00000437568 ZFYVE16Q7Z3T8 1539 aa40.36■■■■■ 4.05
PMS2P3-205ENST00000437568 CDC42BPBQ9Y5S2 1711 aa40.36■■■■■ 4.05
PMS2P3-205ENST00000437568 ADAMTSL3P82987 1691 aa40.33■■■■■ 4.05
PMS2P3-205ENST00000437568 PREX2Q70Z35 1606 aa40.31■■■■■ 4.04
PMS2P3-205ENST00000437568 AFAP1Q8N556 730 aa40.3■■■■■ 4.04
PMS2P3-205ENST00000437568 BCORL1Q5H9F3 1711 aa40.28■■■■■ 4.04
PMS2P3-205ENST00000437568 ZNF518AQ6AHZ1 1483 aa40.26■■■■■ 4.04
PMS2P3-205ENST00000437568 CDC42BPAQ5VT25 1732 aa40.24■■■■■ 4.03
PMS2P3-205ENST00000437568 GPATCH8Q9UKJ3 1502 aaKnown RBP40.23■■■■■ 4.03
PMS2P3-205ENST00000437568 MTUS2Q5JR59 1369 aa40.23■■■■■ 4.03
PMS2P3-205ENST00000437568 ARHGEF12Q9NZN5 1544 aa40.21■■■■■ 4.03
PMS2P3-205ENST00000437568 KDM5CP41229 1560 aa40.21■■■■■ 4.03
PMS2P3-205ENST00000437568 ATP10AO60312 1499 aa40.19■■■■■ 4.03
PMS2P3-205ENST00000437568 PTPRMP28827 1452 aa40.19■■■■■ 4.03
PMS2P3-205ENST00000437568 ABCC1P33527 1531 aa40.19■■■■■ 4.02
PMS2P3-205ENST00000437568 SIGLEC1Q9BZZ2 1709 aa40.19■■■■■ 4.02
PMS2P3-205ENST00000437568 TRAPPC8Q9Y2L5 1435 aa40.17■■■■■ 4.02
PMS2P3-205ENST00000437568 MADDQ8WXG6 1647 aa40.14■■■■■ 4.02
PMS2P3-205ENST00000437568 C9orf84Q5VXU9 1444 aa40.12■■■■■ 4.01
PMS2P3-205ENST00000437568 ZNF777Q9ULD5 760 aaPredicted RBP40.12■■■■■ 4.01
PMS2P3-205ENST00000437568 CCNB3Q8WWL7 1395 aa40.11■■■■■ 4.01
PMS2P3-205ENST00000437568 MLH3Q9UHC1 1453 aa40.1■■■■■ 4.01
PMS2P3-205ENST00000437568 ITSN2Q9NZM3 1697 aa40.08■■■■■ 4.01
PMS2P3-205ENST00000437568 EHBP1L1Q8N3D4 1523 aa40.08■■■■■ 4.01
PMS2P3-205ENST00000437568 CFDP1Q9UEE9 299 aaPredicted RBP40.08■■■■■ 4.01
PMS2P3-205ENST00000437568 SAMD9LQ8IVG5 1584 aa40.07■■■■■ 4.01
PMS2P3-205ENST00000437568 HECW2Q9P2P5 1572 aa40.07■■■■■ 4.01
PMS2P3-205ENST00000437568 MYT1LQ9UL68 1186 aa40.07■■■■■ 4.01
PMS2P3-205ENST00000437568 VPS8Q8N3P4 1428 aa40.06■■■■■ 4
PMS2P3-205ENST00000437568 MLECQ14165 292 aa40.05■■■■■ 4
PMS2P3-205ENST00000437568 HNRNPMP52272 730 aaKnown RBP eCLIP40.01■■■■■ 45e-7■■□□□ 13.4
PMS2P3-205ENST00000437568 DIP2CQ9Y2E4 1556 aa40.01■■■■□ 3.99
PMS2P3-205ENST00000437568 KIAA1107Q9UPP5 1409 aa39.99■■■■□ 3.99
PMS2P3-205ENST00000437568 RIMS1Q86UR5 1692 aaKnown RBP39.99■■■■□ 3.99
PMS2P3-205ENST00000437568 TIAM1Q13009 1591 aa39.97■■■■□ 3.99
PMS2P3-205ENST00000437568 SYCP2Q9BX26 1530 aa39.97■■■■□ 3.99
PMS2P3-205ENST00000437568 PLEKHH2Q8IVE3 1493 aa39.95■■■■□ 3.99
PMS2P3-205ENST00000437568 ABCA6Q8N139 1617 aa39.95■■■■□ 3.99
PMS2P3-205ENST00000437568 REREQ9P2R6 1566 aa39.94■■■■□ 3.98
PMS2P3-205ENST00000437568 KIDINS220Q9ULH0 1771 aa39.92■■■■□ 3.98
PMS2P3-205ENST00000437568 ZNF644Q9H582 1327 aaPredicted RBP39.91■■■■□ 3.98
PMS2P3-205ENST00000437568 SPAG9O60271 1321 aaKnown RBP39.89■■■■□ 3.98
PMS2P3-205ENST00000437568 NCOA2Q15596 1464 aa39.88■■■■□ 3.98
PMS2P3-205ENST00000437568 AGLP35573 1532 aa39.84■■■■□ 3.97
PMS2P3-205ENST00000437568 SUPT6HQ7KZ85 1726 aaKnown RBP39.83■■■■□ 3.97
PMS2P3-205ENST00000437568 FER1L4A9Z1Z3 1794 aa39.83■■■■□ 3.97
PMS2P3-205ENST00000437568 LRRC9Q6ZRR7 1453 aa39.82■■■■□ 3.97
PMS2P3-205ENST00000437568 PLPPR3Q6T4P5 718 aa39.81■■■■□ 3.96
PMS2P3-205ENST00000437568 MBD5Q9P267 1494 aa39.81■■■■□ 3.96
PMS2P3-205ENST00000437568 MAP3K1Q13233 1512 aa39.81■■■■□ 3.96
PMS2P3-205ENST00000437568 KANK4Q5T7N3 995 aaPredicted RBP39.77■■■■□ 3.96
PMS2P3-205ENST00000437568 ATP7AQ04656 1500 aa39.75■■■■□ 3.95
PMS2P3-205ENST00000437568 LMTK3Q96Q04 1460 aa39.74■■■■□ 3.95
PMS2P3-205ENST00000437568 INO80Q9ULG1 1556 aaPredicted RBP39.73■■■■□ 3.95
PMS2P3-205ENST00000437568 CEBPAP49715 358 aaPredicted RBP39.7■■■■□ 3.95
PMS2P3-205ENST00000437568 CAMSAP2Q08AD1 1489 aa39.66■■■■□ 3.94
PMS2P3-205ENST00000437568 A2MP01023 1474 aa39.63■■■■□ 3.94
PMS2P3-205ENST00000437568 RTEL1-TNFRSF6BF6WH68 1400 aa39.63■■■■□ 3.93
PMS2P3-205ENST00000437568 RSPH4AQ5TD94 716 aa39.62■■■■□ 3.93
PMS2P3-205ENST00000437568 PLXNC1O60486 1568 aa39.6■■■■□ 3.93
PMS2P3-205ENST00000437568 ESF1Q9H501 851 aaKnown RBP39.58■■■■□ 3.93
PMS2P3-205ENST00000437568 CCDC141Q6ZP82 1450 aa39.57■■■■□ 3.93
PMS2P3-205ENST00000437568 HSPA2P54652 639 aa39.56■■■■□ 3.92
PMS2P3-205ENST00000437568 APLP2Q06481 763 aa39.54■■■■□ 3.92
PMS2P3-205ENST00000437568 CNTLNQ9NXG0 1405 aa39.53■■■■□ 3.92
PMS2P3-205ENST00000437568 ADGBQ8N7X0 1667 aa39.51■■■■□ 3.91
PMS2P3-205ENST00000437568 MYOM3Q5VTT5 1437 aa39.5■■■■□ 3.91
PMS2P3-205ENST00000437568 ARHGEF5Q12774 1597 aa39.5■■■■□ 3.91
PMS2P3-205ENST00000437568 MIA2Q96PC5 1412 aa39.48■■■■□ 3.91
PMS2P3-205ENST00000437568 C3P01024 1663 aa39.48■■■■□ 3.91
PMS2P3-205ENST00000437568 DHX29Q7Z478 1369 aaKnown RBP39.47■■■■□ 3.91
PMS2P3-205ENST00000437568 TSPY4P0CV99 314 aa39.44■■■■□ 3.9
PMS2P3-205ENST00000437568 TSPY10P0CW01 314 aa39.44■■■■□ 3.9
PMS2P3-205ENST00000437568 GGT6Q6P531 493 aa39.44■■■■□ 3.9
PMS2P3-205ENST00000437568 PREX1Q8TCU6 1659 aa39.42■■■■□ 3.9
PMS2P3-205ENST00000437568 ZMYM3Q14202 1370 aa39.41■■■■□ 3.9
PMS2P3-205ENST00000437568 PPP6R1Q9UPN7 881 aa39.4■■■■□ 3.9
PMS2P3-205ENST00000437568 SETD1BQ9UPS6 1966 aaKnown RBP39.37■■■■□ 3.89
PMS2P3-205ENST00000437568 UHRF1BP1Q6BDS2 1440 aa39.37■■■■□ 3.89
PMS2P3-205ENST00000437568 MROH2AA6NES4 1674 aa39.36■■■■□ 3.89
PMS2P3-205ENST00000437568 KIF3BO15066 747 aa39.32■■■■□ 3.89
PMS2P3-205ENST00000437568 CLTCQ00610 1675 aaKnown RBP39.31■■■■□ 3.88
PMS2P3-205ENST00000437568 NPATQ14207 1427 aa39.3■■■■□ 3.88
PMS2P3-205ENST00000437568 MAST1Q9Y2H9 1570 aa39.29■■■■□ 3.88
PMS2P3-205ENST00000437568 ILDR1Q86SU0 546 aaPredicted RBP39.25■■■■□ 3.87
PMS2P3-205ENST00000437568 PTPRKQ15262 1439 aa39.22■■■■□ 3.87
PMS2P3-205ENST00000437568 FGD6Q6ZV73 1430 aa39.21■■■■□ 3.87
PMS2P3-205ENST00000437568 PTPN23Q9H3S7 1636 aa39.21■■■■□ 3.87
PMS2P3-205ENST00000437568 ABCC5O15440 1437 aa39.19■■■■□ 3.86
PMS2P3-205ENST00000437568 TCOF1Q13428 1488 aaKnown RBP39.17■■■■□ 3.86
PMS2P3-205ENST00000437568 FAM135AQ9P2D6 1515 aa39.12■■■■□ 3.85
PMS2P3-205ENST00000437568 STRCQ7RTU9 1775 aa39.12■■■■□ 3.85
PMS2P3-205ENST00000437568 WASHC2CQ9Y4E1 1318 aa39.12■■■■□ 3.85
PMS2P3-205ENST00000437568 SHANK2Q9UPX8 1470 aa39.1■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms