RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	TAOK2	Q9UL54	1235 aa		10.28	□□□□□ -0.76
ECHDC1-208	ENST00000436638	BIVM-ERCC5	R4GMW8	1640 aa		10.28	□□□□□ -0.76
ECHDC1-208	ENST00000436638	POLA1	P09884	1462 aa	Predicted RBP	10.28	□□□□□ -0.76
ECHDC1-208	ENST00000436638	GOLGA2	Q08379	1002 aa		10.27	□□□□□ -0.77
ECHDC1-208	ENST00000436638	SLC39A7	Q92504	469 aa		10.27	□□□□□ -0.77
ECHDC1-208	ENST00000436638	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.26	□□□□□ -0.77
ECHDC1-208	ENST00000436638	ZFP91	Q96JP5	570 aa	Predicted RBP	10.26	□□□□□ -0.77
ECHDC1-208	ENST00000436638	C7	P10643	843 aa		10.25	□□□□□ -0.77
ECHDC1-208	ENST00000436638	RAD54L2	Q9Y4B4	1467 aa		10.24	□□□□□ -0.77
ECHDC1-208	ENST00000436638	CABP2	Q9NPB3	220 aa		10.24	□□□□□ -0.77
ECHDC1-208	ENST00000436638	METRN	Q9UJH8	293 aa		10.24	□□□□□ -0.77
ECHDC1-208	ENST00000436638	MKRN3	Q13064	507 aa	Known RBP	10.22	□□□□□ -0.77
ECHDC1-208	ENST00000436638	SEC24B	O95487	1268 aa		10.21	□□□□□ -0.77
ECHDC1-208	ENST00000436638	STK25	O00506	426 aa		10.2	□□□□□ -0.78
ECHDC1-208	ENST00000436638	TARBP1	Q13395	1621 aa	Known RBP	10.2	□□□□□ -0.78
ECHDC1-208	ENST00000436638	TDRD9	Q8NDG6	1382 aa	Known RBP	10.2	□□□□□ -0.78
ECHDC1-208	ENST00000436638	ABCA10	Q8WWZ4	1543 aa		10.2	□□□□□ -0.78
ECHDC1-208	ENST00000436638	ZNF608	Q9ULD9	1512 aa	Predicted RBP	10.19	□□□□□ -0.78
ECHDC1-208	ENST00000436638	IER5L	Q5T953	404 aa		10.19	□□□□□ -0.78
ECHDC1-208	ENST00000436638	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.19	□□□□□ -0.78
ECHDC1-208	ENST00000436638	STK24	Q9Y6E0	443 aa		10.19	□□□□□ -0.78
ECHDC1-208	ENST00000436638	AQR	O60306	1485 aa	Known RBP eCLIP	10.17	□□□□□ -0.78
ECHDC1-208	ENST00000436638	WDR97	A6NE52	1622 aa		10.17	□□□□□ -0.78
ECHDC1-208	ENST00000436638	GAPVD1	Q14C86	1478 aa		10.16	□□□□□ -0.78
ECHDC1-208	ENST00000436638	KIF27	Q86VH2	1401 aa		10.16	□□□□□ -0.78
ECHDC1-208	ENST00000436638	EIF4G3	O43432	1585 aa	Known RBP	10.15	□□□□□ -0.78
ECHDC1-208	ENST00000436638	PLCG2	P16885	1265 aa		10.15	□□□□□ -0.78
ECHDC1-208	ENST00000436638	EFCAB3	Q8N7B9	438 aa		10.15	□□□□□ -0.78
ECHDC1-208	ENST00000436638	COLQ	Q9Y215	455 aa	Predicted RBP	10.15	□□□□□ -0.78
ECHDC1-208	ENST00000436638	CHGA	P10645	457 aa	Known RBP	10.14	□□□□□ -0.79
ECHDC1-208	ENST00000436638	LHX8	Q68G74	356 aa		10.14	□□□□□ -0.79
ECHDC1-208	ENST00000436638	GRIN2B	Q13224	1484 aa		10.14	□□□□□ -0.79
ECHDC1-208	ENST00000436638	POTEF	A5A3E0	1075 aa		10.13	□□□□□ -0.79
ECHDC1-208	ENST00000436638	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.13	□□□□□ -0.79	3e-7	■■□□□ 13.1
ECHDC1-208	ENST00000436638	IRX5	P78411	483 aa	Predicted RBP	10.12	□□□□□ -0.79
ECHDC1-208	ENST00000436638	OCEL1	Q9H607	264 aa		10.12	□□□□□ -0.79
ECHDC1-208	ENST00000436638	ABCA5	Q8WWZ7	1642 aa		10.11	□□□□□ -0.79
ECHDC1-208	ENST00000436638	POTEB2	H3BUK9	544 aa		10.1	□□□□□ -0.79
ECHDC1-208	ENST00000436638	SNAPC4	Q5SXM2	1469 aa		10.1	□□□□□ -0.79
ECHDC1-208	ENST00000436638	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.09	□□□□□ -0.79
ECHDC1-208	ENST00000436638	MAGI1	Q96QZ7	1491 aa	Predicted RBP	10.09	□□□□□ -0.79
ECHDC1-208	ENST00000436638	PBRM1	Q86U86	1689 aa		10.09	□□□□□ -0.79
ECHDC1-208	ENST00000436638	ERICH3	Q5RHP9	1530 aa		10.08	□□□□□ -0.8
ECHDC1-208	ENST00000436638	HS6ST3	Q8IZP7	471 aa		10.08	□□□□□ -0.8
ECHDC1-208	ENST00000436638	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.08	□□□□□ -0.8
ECHDC1-208	ENST00000436638	EEA1	Q15075	1411 aa		10.07	□□□□□ -0.8
ECHDC1-208	ENST00000436638	SOX12	O15370	315 aa		10.07	□□□□□ -0.8
ECHDC1-208	ENST00000436638	IGF1R	P08069	1367 aa		10.06	□□□□□ -0.8
ECHDC1-208	ENST00000436638	RUSC2	Q8N2Y8	1516 aa		10.06	□□□□□ -0.8
ECHDC1-208	ENST00000436638	FHAD1	B1AJZ9	1412 aa		10.06	□□□□□ -0.8
ECHDC1-208	ENST00000436638	ERICH6	Q7L0X2	663 aa		10.05	□□□□□ -0.8
ECHDC1-208	ENST00000436638	PDCD7	Q8N8D1	485 aa	Known RBP	10.05	□□□□□ -0.8
ECHDC1-208	ENST00000436638	PHF8	Q9UPP1	1060 aa		10.05	□□□□□ -0.8
ECHDC1-208	ENST00000436638	SYNJ2	O15056	1496 aa		10.04	□□□□□ -0.8
ECHDC1-208	ENST00000436638	CARMIL1	Q5VZK9	1371 aa		10.03	□□□□□ -0.8
ECHDC1-208	ENST00000436638	DPY19L2	Q6NUT2	758 aa		10.03	□□□□□ -0.8
ECHDC1-208	ENST00000436638	CUL7	Q14999	1698 aa		10.02	□□□□□ -0.8
ECHDC1-208	ENST00000436638	ADAMTS12	P58397	1594 aa		10.02	□□□□□ -0.81
ECHDC1-208	ENST00000436638	POTEJ	P0CG39	1038 aa		10.02	□□□□□ -0.81
ECHDC1-208	ENST00000436638	NLRP6	P59044	892 aa		10.02	□□□□□ -0.81
ECHDC1-208	ENST00000436638	ILDR1	Q86SU0	546 aa	Predicted RBP	10.01	□□□□□ -0.81
ECHDC1-208	ENST00000436638	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10	□□□□□ -0.81
ECHDC1-208	ENST00000436638	MFRP	Q9BY79	579 aa		10	□□□□□ -0.81
ECHDC1-208	ENST00000436638		G3V3G9	751 aa		9.99	□□□□□ -0.81
ECHDC1-208	ENST00000436638	MAMSTR	Q6ZN01	415 aa		9.99	□□□□□ -0.81
ECHDC1-208	ENST00000436638	CHD1	O14646	1710 aa		9.99	□□□□□ -0.81
ECHDC1-208	ENST00000436638	GRIN2A	Q12879	1464 aa		9.98	□□□□□ -0.81
ECHDC1-208	ENST00000436638	RAPGEF2	Q9Y4G8	1499 aa		9.98	□□□□□ -0.81
ECHDC1-208	ENST00000436638	SCUBE2	Q9NQ36	999 aa		9.98	□□□□□ -0.81
ECHDC1-208	ENST00000436638	OTUD5	Q96G74	571 aa		9.97	□□□□□ -0.81
ECHDC1-208	ENST00000436638	MS4A4A	Q96JQ5	239 aa		9.97	□□□□□ -0.81
ECHDC1-208	ENST00000436638	FBXO22	Q8NEZ5	403 aa		9.96	□□□□□ -0.82
ECHDC1-208	ENST00000436638	NKX1-1	Q15270	411 aa	Predicted RBP	9.95	□□□□□ -0.82
ECHDC1-208	ENST00000436638	BOLA1	Q9Y3E2	137 aa		9.95	□□□□□ -0.82
ECHDC1-208	ENST00000436638	PRX	Q9BXM0	1461 aa		9.95	□□□□□ -0.82
ECHDC1-208	ENST00000436638	DNAJC5	Q9H3Z4	198 aa		9.93	□□□□□ -0.82
ECHDC1-208	ENST00000436638	NUP160	Q12769	1436 aa		9.92	□□□□□ -0.82
ECHDC1-208	ENST00000436638	UBTF	P17480	764 aa	Known RBP	9.92	□□□□□ -0.82
ECHDC1-208	ENST00000436638	C3orf67	Q6ZVT6	689 aa		9.92	□□□□□ -0.82
ECHDC1-208	ENST00000436638	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	9.91	□□□□□ -0.82
ECHDC1-208	ENST00000436638	KIF21B	O75037	1637 aa		9.91	□□□□□ -0.82
ECHDC1-208	ENST00000436638	CEP170	Q5SW79	1584 aa		9.91	□□□□□ -0.82
ECHDC1-208	ENST00000436638	GOLGA3	Q08378	1498 aa		9.91	□□□□□ -0.82
ECHDC1-208	ENST00000436638	KIAA0586	Q9BVV6	1533 aa		9.89	□□□□□ -0.83
ECHDC1-208	ENST00000436638	PRKCSH	P14314	528 aa	Predicted RBP	9.89	□□□□□ -0.83
ECHDC1-208	ENST00000436638	BBX	Q8WY36	941 aa	Predicted RBP	9.89	□□□□□ -0.83
ECHDC1-208	ENST00000436638	MICALL2	Q8IY33	904 aa		9.88	□□□□□ -0.83
ECHDC1-208	ENST00000436638	SLAIN1	Q8ND83	568 aa		9.88	□□□□□ -0.83
ECHDC1-208	ENST00000436638	JPH4	Q96JJ6	628 aa		9.88	□□□□□ -0.83
ECHDC1-208	ENST00000436638	RYDEN	Q9NUL5	291 aa	Known RBP	9.88	□□□□□ -0.83
ECHDC1-208	ENST00000436638	CLASP1	Q7Z460	1538 aa		9.87	□□□□□ -0.83
ECHDC1-208	ENST00000436638	PPP1R37	O75864	691 aa		9.87	□□□□□ -0.83
ECHDC1-208	ENST00000436638	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	9.86	□□□□□ -0.83
ECHDC1-208	ENST00000436638	IQGAP2	Q13576	1575 aa		9.85	□□□□□ -0.83
ECHDC1-208	ENST00000436638	RANGAP1	P46060	587 aa	Predicted RBP	9.85	□□□□□ -0.83
ECHDC1-208	ENST00000436638	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	9.85	□□□□□ -0.83
ECHDC1-208	ENST00000436638	CTTNBP2	Q8WZ74	1663 aa		9.84	□□□□□ -0.83
ECHDC1-208	ENST00000436638	GTPBP6	O43824	516 aa	Predicted RBP	9.84	□□□□□ -0.83
ECHDC1-208	ENST00000436638	CARMIL2	Q6F5E8	1435 aa		9.83	□□□□□ -0.84
ECHDC1-208	ENST00000436638	PRG4	Q92954	1404 aa	Predicted RBP	9.82	□□□□□ -0.84

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