RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 TAOK2Q9UL54 1235 aa10.28□□□□□ -0.76
ECHDC1-208ENST00000436638 BIVM-ERCC5R4GMW8 1640 aa10.28□□□□□ -0.76
ECHDC1-208ENST00000436638 POLA1P09884 1462 aaPredicted RBP10.28□□□□□ -0.76
ECHDC1-208ENST00000436638 GOLGA2Q08379 1002 aa10.27□□□□□ -0.77
ECHDC1-208ENST00000436638 SLC39A7Q92504 469 aa10.27□□□□□ -0.77
ECHDC1-208ENST00000436638 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.26□□□□□ -0.77
ECHDC1-208ENST00000436638 ZFP91Q96JP5 570 aaPredicted RBP10.26□□□□□ -0.77
ECHDC1-208ENST00000436638 C7P10643 843 aa10.25□□□□□ -0.77
ECHDC1-208ENST00000436638 RAD54L2Q9Y4B4 1467 aa10.24□□□□□ -0.77
ECHDC1-208ENST00000436638 CABP2Q9NPB3 220 aa10.24□□□□□ -0.77
ECHDC1-208ENST00000436638 METRNQ9UJH8 293 aa10.24□□□□□ -0.77
ECHDC1-208ENST00000436638 MKRN3Q13064 507 aaKnown RBP10.22□□□□□ -0.77
ECHDC1-208ENST00000436638 SEC24BO95487 1268 aa10.21□□□□□ -0.77
ECHDC1-208ENST00000436638 STK25O00506 426 aa10.2□□□□□ -0.78
ECHDC1-208ENST00000436638 TARBP1Q13395 1621 aaKnown RBP10.2□□□□□ -0.78
ECHDC1-208ENST00000436638 TDRD9Q8NDG6 1382 aaKnown RBP10.2□□□□□ -0.78
ECHDC1-208ENST00000436638 ABCA10Q8WWZ4 1543 aa10.2□□□□□ -0.78
ECHDC1-208ENST00000436638 ZNF608Q9ULD9 1512 aaPredicted RBP10.19□□□□□ -0.78
ECHDC1-208ENST00000436638 IER5LQ5T953 404 aa10.19□□□□□ -0.78
ECHDC1-208ENST00000436638 BCL11BQ9C0K0 894 aaPredicted RBP10.19□□□□□ -0.78
ECHDC1-208ENST00000436638 STK24Q9Y6E0 443 aa10.19□□□□□ -0.78
ECHDC1-208ENST00000436638 AQRO60306 1485 aaKnown RBP eCLIP10.17□□□□□ -0.78
ECHDC1-208ENST00000436638 WDR97A6NE52 1622 aa10.17□□□□□ -0.78
ECHDC1-208ENST00000436638 GAPVD1Q14C86 1478 aa10.16□□□□□ -0.78
ECHDC1-208ENST00000436638 KIF27Q86VH2 1401 aa10.16□□□□□ -0.78
ECHDC1-208ENST00000436638 EIF4G3O43432 1585 aaKnown RBP10.15□□□□□ -0.78
ECHDC1-208ENST00000436638 PLCG2P16885 1265 aa10.15□□□□□ -0.78
ECHDC1-208ENST00000436638 EFCAB3Q8N7B9 438 aa10.15□□□□□ -0.78
ECHDC1-208ENST00000436638 COLQQ9Y215 455 aaPredicted RBP10.15□□□□□ -0.78
ECHDC1-208ENST00000436638 CHGAP10645 457 aaKnown RBP10.14□□□□□ -0.79
ECHDC1-208ENST00000436638 LHX8Q68G74 356 aa10.14□□□□□ -0.79
ECHDC1-208ENST00000436638 GRIN2BQ13224 1484 aa10.14□□□□□ -0.79
ECHDC1-208ENST00000436638 POTEFA5A3E0 1075 aa10.13□□□□□ -0.79
ECHDC1-208ENST00000436638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.13□□□□□ -0.793e-7■■□□□ 13.1
ECHDC1-208ENST00000436638 IRX5P78411 483 aaPredicted RBP10.12□□□□□ -0.79
ECHDC1-208ENST00000436638 OCEL1Q9H607 264 aa10.12□□□□□ -0.79
ECHDC1-208ENST00000436638 ABCA5Q8WWZ7 1642 aa10.11□□□□□ -0.79
ECHDC1-208ENST00000436638 POTEB2H3BUK9 544 aa10.1□□□□□ -0.79
ECHDC1-208ENST00000436638 SNAPC4Q5SXM2 1469 aa10.1□□□□□ -0.79
ECHDC1-208ENST00000436638 CHMP7Q8WUX9 453 aaPredicted RBP10.09□□□□□ -0.79
ECHDC1-208ENST00000436638 MAGI1Q96QZ7 1491 aaPredicted RBP10.09□□□□□ -0.79
ECHDC1-208ENST00000436638 PBRM1Q86U86 1689 aa10.09□□□□□ -0.79
ECHDC1-208ENST00000436638 ERICH3Q5RHP9 1530 aa10.08□□□□□ -0.8
ECHDC1-208ENST00000436638 HS6ST3Q8IZP7 471 aa10.08□□□□□ -0.8
ECHDC1-208ENST00000436638 FAM9AQ8IZU1 332 aaPredicted RBP10.08□□□□□ -0.8
ECHDC1-208ENST00000436638 EEA1Q15075 1411 aa10.07□□□□□ -0.8
ECHDC1-208ENST00000436638 SOX12O15370 315 aa10.07□□□□□ -0.8
ECHDC1-208ENST00000436638 IGF1RP08069 1367 aa10.06□□□□□ -0.8
ECHDC1-208ENST00000436638 RUSC2Q8N2Y8 1516 aa10.06□□□□□ -0.8
ECHDC1-208ENST00000436638 FHAD1B1AJZ9 1412 aa10.06□□□□□ -0.8
ECHDC1-208ENST00000436638 ERICH6Q7L0X2 663 aa10.05□□□□□ -0.8
ECHDC1-208ENST00000436638 PDCD7Q8N8D1 485 aaKnown RBP10.05□□□□□ -0.8
ECHDC1-208ENST00000436638 PHF8Q9UPP1 1060 aa10.05□□□□□ -0.8
ECHDC1-208ENST00000436638 SYNJ2O15056 1496 aa10.04□□□□□ -0.8
ECHDC1-208ENST00000436638 CARMIL1Q5VZK9 1371 aa10.03□□□□□ -0.8
ECHDC1-208ENST00000436638 DPY19L2Q6NUT2 758 aa10.03□□□□□ -0.8
ECHDC1-208ENST00000436638 CUL7Q14999 1698 aa10.02□□□□□ -0.8
ECHDC1-208ENST00000436638 ADAMTS12P58397 1594 aa10.02□□□□□ -0.81
ECHDC1-208ENST00000436638 POTEJP0CG39 1038 aa10.02□□□□□ -0.81
ECHDC1-208ENST00000436638 NLRP6P59044 892 aa10.02□□□□□ -0.81
ECHDC1-208ENST00000436638 ILDR1Q86SU0 546 aaPredicted RBP10.01□□□□□ -0.81
ECHDC1-208ENST00000436638 L3MBTL3Q96JM7 780 aaPredicted RBP10□□□□□ -0.81
ECHDC1-208ENST00000436638 MFRPQ9BY79 579 aa10□□□□□ -0.81
ECHDC1-208ENST00000436638 G3V3G9 751 aa9.99□□□□□ -0.81
ECHDC1-208ENST00000436638 MAMSTRQ6ZN01 415 aa9.99□□□□□ -0.81
ECHDC1-208ENST00000436638 CHD1O14646 1710 aa9.99□□□□□ -0.81
ECHDC1-208ENST00000436638 GRIN2AQ12879 1464 aa9.98□□□□□ -0.81
ECHDC1-208ENST00000436638 RAPGEF2Q9Y4G8 1499 aa9.98□□□□□ -0.81
ECHDC1-208ENST00000436638 SCUBE2Q9NQ36 999 aa9.98□□□□□ -0.81
ECHDC1-208ENST00000436638 OTUD5Q96G74 571 aa9.97□□□□□ -0.81
ECHDC1-208ENST00000436638 MS4A4AQ96JQ5 239 aa9.97□□□□□ -0.81
ECHDC1-208ENST00000436638 FBXO22Q8NEZ5 403 aa9.96□□□□□ -0.82
ECHDC1-208ENST00000436638 NKX1-1Q15270 411 aaPredicted RBP9.95□□□□□ -0.82
ECHDC1-208ENST00000436638 BOLA1Q9Y3E2 137 aa9.95□□□□□ -0.82
ECHDC1-208ENST00000436638 PRXQ9BXM0 1461 aa9.95□□□□□ -0.82
ECHDC1-208ENST00000436638 DNAJC5Q9H3Z4 198 aa9.93□□□□□ -0.82
ECHDC1-208ENST00000436638 NUP160Q12769 1436 aa9.92□□□□□ -0.82
ECHDC1-208ENST00000436638 UBTFP17480 764 aaKnown RBP9.92□□□□□ -0.82
ECHDC1-208ENST00000436638 C3orf67Q6ZVT6 689 aa9.92□□□□□ -0.82
ECHDC1-208ENST00000436638 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.91□□□□□ -0.82
ECHDC1-208ENST00000436638 KIF21BO75037 1637 aa9.91□□□□□ -0.82
ECHDC1-208ENST00000436638 CEP170Q5SW79 1584 aa9.91□□□□□ -0.82
ECHDC1-208ENST00000436638 GOLGA3Q08378 1498 aa9.91□□□□□ -0.82
ECHDC1-208ENST00000436638 KIAA0586Q9BVV6 1533 aa9.89□□□□□ -0.83
ECHDC1-208ENST00000436638 PRKCSHP14314 528 aaPredicted RBP9.89□□□□□ -0.83
ECHDC1-208ENST00000436638 BBXQ8WY36 941 aaPredicted RBP9.89□□□□□ -0.83
ECHDC1-208ENST00000436638 MICALL2Q8IY33 904 aa9.88□□□□□ -0.83
ECHDC1-208ENST00000436638 SLAIN1Q8ND83 568 aa9.88□□□□□ -0.83
ECHDC1-208ENST00000436638 JPH4Q96JJ6 628 aa9.88□□□□□ -0.83
ECHDC1-208ENST00000436638 RYDENQ9NUL5 291 aaKnown RBP9.88□□□□□ -0.83
ECHDC1-208ENST00000436638 CLASP1Q7Z460 1538 aa9.87□□□□□ -0.83
ECHDC1-208ENST00000436638 PPP1R37O75864 691 aa9.87□□□□□ -0.83
ECHDC1-208ENST00000436638 TMEM121BQ9BXQ6 578 aaPredicted RBP9.86□□□□□ -0.83
ECHDC1-208ENST00000436638 IQGAP2Q13576 1575 aa9.85□□□□□ -0.83
ECHDC1-208ENST00000436638 RANGAP1P46060 587 aaPredicted RBP9.85□□□□□ -0.83
ECHDC1-208ENST00000436638 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.85□□□□□ -0.83
ECHDC1-208ENST00000436638 CTTNBP2Q8WZ74 1663 aa9.84□□□□□ -0.83
ECHDC1-208ENST00000436638 GTPBP6O43824 516 aaPredicted RBP9.84□□□□□ -0.83
ECHDC1-208ENST00000436638 CARMIL2Q6F5E8 1435 aa9.83□□□□□ -0.84
ECHDC1-208ENST00000436638 PRG4Q92954 1404 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms