RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 EFCAB2Q5VUJ9 269 aa33.2■■■□□ 2.91
GTF3A-203ENST00000435781 DENND4BO75064 1496 aaPredicted RBP33.19■■■□□ 2.9
GTF3A-203ENST00000435781 ADGRL1O94910 1474 aa33.19■■■□□ 2.9
GTF3A-203ENST00000435781 RAPGEF3O95398 923 aa33.19■■■□□ 2.9
GTF3A-203ENST00000435781 MAP3K1Q13233 1512 aa33.17■■■□□ 2.9
GTF3A-203ENST00000435781 SUPT6HQ7KZ85 1726 aaKnown RBP33.15■■■□□ 2.9
GTF3A-203ENST00000435781 GPATCH8Q9UKJ3 1502 aaKnown RBP33.13■■■□□ 2.89
GTF3A-203ENST00000435781 SCAPERQ9BY12 1400 aa33.12■■■□□ 2.89
GTF3A-203ENST00000435781 LRRC9Q6ZRR7 1453 aa33.11■■■□□ 2.89
GTF3A-203ENST00000435781 ITSN2Q9NZM3 1697 aa33.09■■■□□ 2.89
GTF3A-203ENST00000435781 CCNB3Q8WWL7 1395 aa33.09■■■□□ 2.89
GTF3A-203ENST00000435781 ZMYM4Q5VZL5 1548 aa33.08■■■□□ 2.89
GTF3A-203ENST00000435781 POGZQ7Z3K3 1410 aa33.08■■■□□ 2.89
GTF3A-203ENST00000435781 ABCC1P33527 1531 aa33.07■■■□□ 2.88
GTF3A-203ENST00000435781 NCOA2Q15596 1464 aa33.05■■■□□ 2.88
GTF3A-203ENST00000435781 SAMD9LQ8IVG5 1584 aa33.04■■■□□ 2.88
GTF3A-203ENST00000435781 ARHGEF40Q8TER5 1519 aa33.01■■■□□ 2.87
GTF3A-203ENST00000435781 KANK4Q5T7N3 995 aaPredicted RBP33■■■□□ 2.87
GTF3A-203ENST00000435781 ZNF518AQ6AHZ1 1483 aa32.99■■■□□ 2.87
GTF3A-203ENST00000435781 ARHGEF12Q9NZN5 1544 aa32.98■■■□□ 2.87
GTF3A-203ENST00000435781 KDM5CP41229 1560 aa32.97■■■□□ 2.87
GTF3A-203ENST00000435781 APLP2Q06481 763 aa32.97■■■□□ 2.87
GTF3A-203ENST00000435781 CFDP1Q9UEE9 299 aaPredicted RBP32.97■■■□□ 2.87
GTF3A-203ENST00000435781 ZNF777Q9ULD5 760 aaPredicted RBP32.96■■■□□ 2.87
GTF3A-203ENST00000435781 MAGI2Q86UL8 1455 aa32.95■■■□□ 2.87
GTF3A-203ENST00000435781 ZFYVE16Q7Z3T8 1539 aa32.95■■■□□ 2.87
GTF3A-203ENST00000435781 SYCP2Q9BX26 1530 aa32.93■■■□□ 2.86
GTF3A-203ENST00000435781 TRAPPC8Q9Y2L5 1435 aa32.92■■■□□ 2.86
GTF3A-203ENST00000435781 YEATS2Q9ULM3 1422 aa32.91■■■□□ 2.86
GTF3A-203ENST00000435781 PLEKHH2Q8IVE3 1493 aa32.91■■■□□ 2.86
GTF3A-203ENST00000435781 AFAP1Q8N556 730 aa32.9■■■□□ 2.86
GTF3A-203ENST00000435781 HECW2Q9P2P5 1572 aa32.89■■■□□ 2.86
GTF3A-203ENST00000435781 KIAA1107Q9UPP5 1409 aa32.87■■■□□ 2.85
GTF3A-203ENST00000435781 KDM4FA0A1W2PPD8 638 aa32.87■■■□□ 2.85
GTF3A-203ENST00000435781 ZNF644Q9H582 1327 aaPredicted RBP32.82■■■□□ 2.84
GTF3A-203ENST00000435781 MLH3Q9UHC1 1453 aa32.82■■■□□ 2.84
GTF3A-203ENST00000435781 HNRNPMP52272 730 aaKnown RBP eCLIP32.82■■■□□ 2.84
GTF3A-203ENST00000435781 SIGLEC1Q9BZZ2 1709 aa32.82■■■□□ 2.84
GTF3A-203ENST00000435781 KIDINS220Q9ULH0 1771 aa32.81■■■□□ 2.84
GTF3A-203ENST00000435781 CAMSAP2Q08AD1 1489 aa32.8■■■□□ 2.84
GTF3A-203ENST00000435781 ABCA6Q8N139 1617 aa32.79■■■□□ 2.84
GTF3A-203ENST00000435781 DIP2CQ9Y2E4 1556 aa32.78■■■□□ 2.84
GTF3A-203ENST00000435781 MYOM3Q5VTT5 1437 aa32.77■■■□□ 2.84
GTF3A-203ENST00000435781 ATP10AO60312 1499 aa32.77■■■□□ 2.84
GTF3A-203ENST00000435781 BCORL1Q5H9F3 1711 aa32.76■■■□□ 2.83
GTF3A-203ENST00000435781 MBD5Q9P267 1494 aa32.75■■■□□ 2.83
GTF3A-203ENST00000435781 AEBP2Q6ZN18 517 aaPredicted RBP32.75■■■□□ 2.83
GTF3A-203ENST00000435781 MYT1LQ9UL68 1186 aa32.73■■■□□ 2.83
GTF3A-203ENST00000435781 C9orf84Q5VXU9 1444 aa32.73■■■□□ 2.83
GTF3A-203ENST00000435781 INO80Q9ULG1 1556 aaPredicted RBP32.73■■■□□ 2.83
GTF3A-203ENST00000435781 ADAMTSL3P82987 1691 aa32.72■■■□□ 2.83
GTF3A-203ENST00000435781 MIA2Q96PC5 1412 aa32.71■■■□□ 2.83
GTF3A-203ENST00000435781 ARID4BQ4LE39 1312 aaPredicted RBP32.71■■■□□ 2.83
GTF3A-203ENST00000435781 ATP7AQ04656 1500 aa32.7■■■□□ 2.83
GTF3A-203ENST00000435781 REREQ9P2R6 1566 aa32.69■■■□□ 2.82
GTF3A-203ENST00000435781 SPAG9O60271 1321 aaKnown RBP32.69■■■□□ 2.82
GTF3A-203ENST00000435781 ARHGEF5Q12774 1597 aa32.67■■■□□ 2.82
GTF3A-203ENST00000435781 CCDC141Q6ZP82 1450 aa32.66■■■□□ 2.82
GTF3A-203ENST00000435781 PTPN23Q9H3S7 1636 aa32.62■■■□□ 2.81
GTF3A-203ENST00000435781 MADDQ8WXG6 1647 aa32.62■■■□□ 2.81
GTF3A-203ENST00000435781 FGD6Q6ZV73 1430 aa32.6■■■□□ 2.81
GTF3A-203ENST00000435781 ADGBQ8N7X0 1667 aa32.58■■■□□ 2.81
GTF3A-203ENST00000435781 RSPH4AQ5TD94 716 aa32.57■■■□□ 2.8
GTF3A-203ENST00000435781 RTEL1-TNFRSF6BF6WH68 1400 aa32.56■■■□□ 2.8
GTF3A-203ENST00000435781 AGLP35573 1532 aa32.56■■■□□ 2.8
GTF3A-203ENST00000435781 FER1L4A9Z1Z3 1794 aa32.55■■■□□ 2.8
GTF3A-203ENST00000435781 RIMS1Q86UR5 1692 aaKnown RBP32.54■■■□□ 2.8
GTF3A-203ENST00000435781 TCOF1Q13428 1488 aaKnown RBP32.53■■■□□ 2.8
GTF3A-203ENST00000435781 PLXNC1O60486 1568 aa32.52■■■□□ 2.8
GTF3A-203ENST00000435781 CROCC2H7BZ55 1655 aa32.5■■■□□ 2.79
GTF3A-203ENST00000435781 MAST1Q9Y2H9 1570 aa32.5■■■□□ 2.79
GTF3A-203ENST00000435781 MLECQ14165 292 aa32.5■■■□□ 2.79
GTF3A-203ENST00000435781 A2MP01023 1474 aa32.49■■■□□ 2.79
GTF3A-203ENST00000435781 PTPRMP28827 1452 aa32.47■■■□□ 2.79
GTF3A-203ENST00000435781 TSPY4P0CV99 314 aa32.46■■■□□ 2.79
GTF3A-203ENST00000435781 TSPY10P0CW01 314 aa32.46■■■□□ 2.79
GTF3A-203ENST00000435781 DNMT1P26358 1616 aaKnown RBP32.46■■■□□ 2.79
GTF3A-203ENST00000435781 PPARGC1BQ86YN6 1023 aaKnown RBP32.45■■■□□ 2.79
GTF3A-203ENST00000435781 ABCC5O15440 1437 aa32.41■■■□□ 2.78
GTF3A-203ENST00000435781 SHANK2Q9UPX8 1470 aa32.39■■■□□ 2.78
GTF3A-203ENST00000435781 DAPK1P53355 1430 aa32.38■■■□□ 2.77
GTF3A-203ENST00000435781 DHX29Q7Z478 1369 aaKnown RBP32.36■■■□□ 2.77
GTF3A-203ENST00000435781 FAM50AQ14320 339 aaKnown RBP32.32■■■□□ 2.76
GTF3A-203ENST00000435781 C3P01024 1663 aa32.25■■■□□ 2.75
GTF3A-203ENST00000435781 MROH2AA6NES4 1674 aa32.24■■■□□ 2.75
GTF3A-203ENST00000435781 CLTCQ00610 1675 aaKnown RBP32.24■■■□□ 2.75
GTF3A-203ENST00000435781 EIF2AK4Q9P2K8 1649 aaKnown RBP32.24■■■□□ 2.75
GTF3A-203ENST00000435781 DUOX2Q9NRD8 1548 aa32.24■■■□□ 2.75
GTF3A-203ENST00000435781 CNTLNQ9NXG0 1405 aa32.23■■■□□ 2.75
GTF3A-203ENST00000435781 ESF1Q9H501 851 aaKnown RBP32.22■■■□□ 2.75
GTF3A-203ENST00000435781 KIF15Q9NS87 1388 aa32.21■■■□□ 2.75
GTF3A-203ENST00000435781 KIF3BO15066 747 aa32.21■■■□□ 2.75
GTF3A-203ENST00000435781 GGT6Q6P531 493 aa32.21■■■□□ 2.75
GTF3A-203ENST00000435781 PLPPR3Q6T4P5 718 aa32.21■■■□□ 2.75
GTF3A-203ENST00000435781 RNF17Q9BXT8 1623 aaKnown RBP32.2■■■□□ 2.75
GTF3A-203ENST00000435781 CHIC2Q9UKJ5 165 aa32.19■■■□□ 2.74
GTF3A-203ENST00000435781 ADGRL2O95490 1459 aa32.18■■■□□ 2.74
GTF3A-203ENST00000435781 ANKRD30AQ9BXX3 1397 aa32.18■■■□□ 2.74
GTF3A-203ENST00000435781 RRP7BPQ9NSQ0 103 aa32.16■■■□□ 2.74
GTF3A-203ENST00000435781 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms