RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 RRP7BPQ9NSQ0 103 aa14.5□□□□□ -0.09
SCAF4-203ENST00000434667 DEKP35659 375 aaKnown RBP14.49□□□□□ -0.09
SCAF4-203ENST00000434667 HSPA5P11021 654 aaKnown RBP14.48□□□□□ -0.09
SCAF4-203ENST00000434667 ADGBQ8N7X0 1667 aa14.48□□□□□ -0.09
SCAF4-203ENST00000434667 RTN4Q9NQC3 1192 aaKnown RBP14.48□□□□□ -0.09
SCAF4-203ENST00000434667 CEP170Q5SW79 1584 aa14.48□□□□□ -0.09
SCAF4-203ENST00000434667 WASHC2AQ641Q2 1341 aa14.48□□□□□ -0.09
SCAF4-203ENST00000434667 C11orf95C9JLR9 678 aaPredicted RBP14.48□□□□□ -0.09
SCAF4-203ENST00000434667 NCOA2Q15596 1464 aa14.46□□□□□ -0.1
SCAF4-203ENST00000434667 FANCIQ9NVI1 1328 aa14.44□□□□□ -0.1
SCAF4-203ENST00000434667 RAPGEF6Q8TEU7 1601 aa14.44□□□□□ -0.1
SCAF4-203ENST00000434667 NPM2Q86SE8 214 aaKnown RBP14.44□□□□□ -0.1
SCAF4-203ENST00000434667 CDC42BPAQ5VT25 1732 aa14.44□□□□□ -0.1
SCAF4-203ENST00000434667 IFT140Q96RY7 1462 aa14.43□□□□□ -0.1
SCAF4-203ENST00000434667 NAIPQ13075 1403 aa14.43□□□□□ -0.1
SCAF4-203ENST00000434667 EPRSP07814 1512 aaKnown RBP14.43□□□□□ -0.1
SCAF4-203ENST00000434667 MRS2Q9HD23 443 aa14.43□□□□□ -0.1
SCAF4-203ENST00000434667 SHROOM2Q13796 1616 aa14.42□□□□□ -0.1
SCAF4-203ENST00000434667 MYOM3Q5VTT5 1437 aa14.42□□□□□ -0.1
SCAF4-203ENST00000434667 RTL5Q5HYW3 569 aaPredicted RBP14.42□□□□□ -0.1
SCAF4-203ENST00000434667 EIF5BO60841 1220 aaKnown RBP14.42□□□□□ -0.1
SCAF4-203ENST00000434667 PPP4R2Q9NY27 417 aa14.4□□□□□ -0.1
SCAF4-203ENST00000434667 NUP153P49790 1475 aaKnown RBP14.38□□□□□ -0.11
SCAF4-203ENST00000434667 ABCA8O94911 1581 aa14.38□□□□□ -0.11
SCAF4-203ENST00000434667 ZNF608Q9ULD9 1512 aaPredicted RBP14.38□□□□□ -0.11
SCAF4-203ENST00000434667 ITSN2Q9NZM3 1697 aa14.38□□□□□ -0.11
SCAF4-203ENST00000434667 UACAQ9BZF9 1416 aa14.37□□□□□ -0.11
SCAF4-203ENST00000434667 MIA2Q96PC5 1412 aa14.36□□□□□ -0.11
SCAF4-203ENST00000434667 KIAA0586Q9BVV6 1533 aa14.36□□□□□ -0.11
SCAF4-203ENST00000434667 NUP160Q12769 1436 aa14.35□□□□□ -0.11
SCAF4-203ENST00000434667 GRIN2AQ12879 1464 aa14.35□□□□□ -0.11
SCAF4-203ENST00000434667 MBD5Q9P267 1494 aa14.35□□□□□ -0.11
SCAF4-203ENST00000434667 SALL2Q9Y467 1007 aaPredicted RBP14.34□□□□□ -0.11
SCAF4-203ENST00000434667 ZNF326Q5BKZ1 582 aaKnown RBP14.34□□□□□ -0.11
SCAF4-203ENST00000434667 MAGI1Q96QZ7 1491 aaPredicted RBP14.34□□□□□ -0.11
SCAF4-203ENST00000434667 KDM5DQ9BY66 1539 aa14.34□□□□□ -0.11
SCAF4-203ENST00000434667 ANO8Q9HCE9 1232 aaPredicted RBP14.33□□□□□ -0.11
SCAF4-203ENST00000434667 TIMELESSQ9UNS1 1208 aa14.33□□□□□ -0.11
SCAF4-203ENST00000434667 L3MBTL2Q969R5 705 aa14.33□□□□□ -0.12
SCAF4-203ENST00000434667 ADGRL2O95490 1459 aa14.33□□□□□ -0.12
SCAF4-203ENST00000434667 NOP58Q9Y2X3 529 aaKnown RBP14.33□□□□□ -0.12
SCAF4-203ENST00000434667 PRKRIP1Q9H875 184 aaPredicted RBP14.32□□□□□ -0.12
SCAF4-203ENST00000434667 MTUS2Q5JR59 1369 aa14.32□□□□□ -0.12
SCAF4-203ENST00000434667 CDK13Q14004 1512 aaKnown RBP14.31□□□□□ -0.12
SCAF4-203ENST00000434667 EIF4G2P78344 907 aaKnown RBP eCLIP14.31□□□□□ -0.12
SCAF4-203ENST00000434667 KIF14Q15058 1648 aa14.3□□□□□ -0.12
SCAF4-203ENST00000434667 TDRD9Q8NDG6 1382 aaKnown RBP14.3□□□□□ -0.12
SCAF4-203ENST00000434667 TEX14Q8IWB6 1497 aa14.29□□□□□ -0.12
SCAF4-203ENST00000434667 NBPF8Q3BBV2 869 aa14.29□□□□□ -0.12
SCAF4-203ENST00000434667 SKAP1Q86WV1 359 aa14.28□□□□□ -0.12
SCAF4-203ENST00000434667 CCDC136Q96JN2 1154 aa14.28□□□□□ -0.12
SCAF4-203ENST00000434667 E9PCH4 1651 aa14.27□□□□□ -0.12
SCAF4-203ENST00000434667 IL27Q8NEV9 243 aa14.27□□□□□ -0.13
SCAF4-203ENST00000434667 ABCC10Q5T3U5 1492 aa14.27□□□□□ -0.13
SCAF4-203ENST00000434667 ROCK1Q13464 1354 aa14.27□□□□□ -0.13
SCAF4-203ENST00000434667 LAS1LQ9Y4W2 734 aaKnown RBP14.26□□□□□ -0.13
SCAF4-203ENST00000434667 CDC42BPBQ9Y5S2 1711 aa14.26□□□□□ -0.13
SCAF4-203ENST00000434667 SYNJ2O15056 1496 aa14.23□□□□□ -0.13
SCAF4-203ENST00000434667 ARHGEF5Q12774 1597 aa14.23□□□□□ -0.13
SCAF4-203ENST00000434667 PRKCSHP14314 528 aaPredicted RBP14.22□□□□□ -0.13
SCAF4-203ENST00000434667 MAST1Q9Y2H9 1570 aa14.22□□□□□ -0.13
SCAF4-203ENST00000434667 MPHOSPH9Q99550 1183 aa14.22□□□□□ -0.13
SCAF4-203ENST00000434667 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.22□□□□□ -0.13
SCAF4-203ENST00000434667 PREX2Q70Z35 1606 aa14.22□□□□□ -0.13
SCAF4-203ENST00000434667 KIF7Q2M1P5 1343 aa14.21□□□□□ -0.13
SCAF4-203ENST00000434667 SHANK2Q9UPX8 1470 aa14.21□□□□□ -0.13
SCAF4-203ENST00000434667 DAXXQ9UER7 740 aaPredicted RBP14.21□□□□□ -0.13
SCAF4-203ENST00000434667 CCDC7Q96M83 1385 aa14.2□□□□□ -0.14
SCAF4-203ENST00000434667 CNTLNQ9NXG0 1405 aa14.2□□□□□ -0.14
SCAF4-203ENST00000434667 ZBED9Q6R2W3 1325 aa14.2□□□□□ -0.14
SCAF4-203ENST00000434667 PZPP20742 1482 aa14.2□□□□□ -0.14
SCAF4-203ENST00000434667 ARXQ96QS3 562 aa14.2□□□□□ -0.14
SCAF4-203ENST00000434667 SPATA31E1Q6ZUB1 1445 aa14.2□□□□□ -0.14
SCAF4-203ENST00000434667 ZBTB47Q9UFB7 747 aaPredicted RBP14.18□□□□□ -0.14
SCAF4-203ENST00000434667 DAPK1P53355 1430 aa14.18□□□□□ -0.14
SCAF4-203ENST00000434667 CHD1O14646 1710 aa14.18□□□□□ -0.14
SCAF4-203ENST00000434667 ABCC5O15440 1437 aa14.17□□□□□ -0.14
SCAF4-203ENST00000434667 UNC13BO14795 1591 aa14.17□□□□□ -0.14
SCAF4-203ENST00000434667 ANP32AP39687 249 aaKnown RBP14.17□□□□□ -0.14
SCAF4-203ENST00000434667 PTPRGP23470 1445 aa14.16□□□□□ -0.14
SCAF4-203ENST00000434667 ZNF644Q9H582 1327 aaPredicted RBP14.15□□□□□ -0.14
SCAF4-203ENST00000434667 BCORL1Q5H9F3 1711 aa14.15□□□□□ -0.14
SCAF4-203ENST00000434667 IPO9Q96P70 1041 aaKnown RBP14.15□□□□□ -0.14
SCAF4-203ENST00000434667 RPRD2Q5VT52 1461 aaKnown RBP14.15□□□□□ -0.14
SCAF4-203ENST00000434667 LAMC1P11047 1609 aa14.15□□□□□ -0.14
SCAF4-203ENST00000434667 KDM5CP41229 1560 aa14.14□□□□□ -0.15
SCAF4-203ENST00000434667 GPATCH8Q9UKJ3 1502 aaKnown RBP14.14□□□□□ -0.15
SCAF4-203ENST00000434667 MAGI2Q86UL8 1455 aa14.13□□□□□ -0.15
SCAF4-203ENST00000434667 EXOC6Q8TAG9 804 aa14.13□□□□□ -0.15
SCAF4-203ENST00000434667 PLXNC1O60486 1568 aa14.12□□□□□ -0.15
SCAF4-203ENST00000434667 CAMSAP2Q08AD1 1489 aa14.12□□□□□ -0.15
SCAF4-203ENST00000434667 SLC4A1APQ9BWU0 796 aaKnown RBP14.12□□□□□ -0.15
SCAF4-203ENST00000434667 SLC4A3P48751 1232 aa14.11□□□□□ -0.15
SCAF4-203ENST00000434667 NUDCQ9Y266 331 aa14.11□□□□□ -0.15
SCAF4-203ENST00000434667 SAMD9LQ8IVG5 1584 aa14.11□□□□□ -0.15
SCAF4-203ENST00000434667 PLIN1O60240 522 aa14.11□□□□□ -0.15
SCAF4-203ENST00000434667 CLASP1Q7Z460 1538 aa14.1□□□□□ -0.15
SCAF4-203ENST00000434667 ERICH6BQ5W0A0 696 aa14.1□□□□□ -0.15
SCAF4-203ENST00000434667 NCOA1Q15788 1441 aa14.1□□□□□ -0.15
SCAF4-203ENST00000434667 KDM2AQ9Y2K7 1162 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms