RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 ZFYVE16Q7Z3T8 1539 aa37.28■■■■□ 3.56
HOMER3-203ENST00000433218 POGZQ7Z3K3 1410 aa37.25■■■■□ 3.55
HOMER3-203ENST00000433218 PTPRMP28827 1452 aa37.25■■■■□ 3.55
HOMER3-203ENST00000433218 CASKIN1Q8WXD9 1431 aa37.22■■■■□ 3.55
HOMER3-203ENST00000433218 PREX2Q70Z35 1606 aa37.21■■■■□ 3.55
HOMER3-203ENST00000433218 SCAPERQ9BY12 1400 aa37.19■■■■□ 3.54
HOMER3-203ENST00000433218 CDC42BPAQ5VT25 1732 aa37.18■■■■□ 3.54
HOMER3-203ENST00000433218 ARHGAP5Q13017 1502 aa37.18■■■■□ 3.54
HOMER3-203ENST00000433218 CCDC18Q5T9S5 1454 aa37.15■■■■□ 3.54
HOMER3-203ENST00000433218 FYCO1Q9BQS8 1478 aa37.14■■■■□ 3.54
HOMER3-203ENST00000433218 CLIP1P30622 1438 aa37.13■■■■□ 3.53
HOMER3-203ENST00000433218 FER1L4A9Z1Z3 1794 aa37.13■■■■□ 3.53
HOMER3-203ENST00000433218 ARID4BQ4LE39 1312 aaPredicted RBP37.13■■■■□ 3.53
HOMER3-203ENST00000433218 KDM5CP41229 1560 aa37.1■■■■□ 3.53
HOMER3-203ENST00000433218 ITSN2Q9NZM3 1697 aa37.09■■■■□ 3.53
HOMER3-203ENST00000433218 CDK11AQ9UQ88 783 aaPredicted RBP37.08■■■■□ 3.53
HOMER3-203ENST00000433218 MAGI2Q86UL8 1455 aa37.08■■■■□ 3.53
HOMER3-203ENST00000433218 ABCC1P33527 1531 aa37.04■■■■□ 3.52
HOMER3-203ENST00000433218 ABCA6Q8N139 1617 aa37.02■■■■□ 3.52
HOMER3-203ENST00000433218 ZNF518AQ6AHZ1 1483 aa37■■■■□ 3.51
HOMER3-203ENST00000433218 ARHGEF12Q9NZN5 1544 aa37■■■■□ 3.51
HOMER3-203ENST00000433218 DIP2CQ9Y2E4 1556 aa37■■■■□ 3.51
HOMER3-203ENST00000433218 EFCAB2Q5VUJ9 269 aa37■■■■□ 3.51
HOMER3-203ENST00000433218 C9orf84Q5VXU9 1444 aa36.95■■■■□ 3.5
HOMER3-203ENST00000433218 LMTK3Q96Q04 1460 aa36.94■■■■□ 3.5
HOMER3-203ENST00000433218 SAMD9LQ8IVG5 1584 aa36.93■■■■□ 3.5
HOMER3-203ENST00000433218 ATP10AO60312 1499 aa36.93■■■■□ 3.5
HOMER3-203ENST00000433218 TRAPPC8Q9Y2L5 1435 aa36.9■■■■□ 3.5
HOMER3-203ENST00000433218 KIDINS220Q9ULH0 1771 aa36.9■■■■□ 3.5
HOMER3-203ENST00000433218 AFAP1Q8N556 730 aa36.89■■■■□ 3.5
HOMER3-203ENST00000433218 MLECQ14165 292 aa36.88■■■■□ 3.49
HOMER3-203ENST00000433218 PLPPR3Q6T4P5 718 aa36.84■■■■□ 3.49
HOMER3-203ENST00000433218 SYCP2Q9BX26 1530 aa36.83■■■■□ 3.49
HOMER3-203ENST00000433218 REREQ9P2R6 1566 aa36.82■■■■□ 3.48
HOMER3-203ENST00000433218 CEP162Q5TB80 1403 aa36.81■■■■□ 3.48
HOMER3-203ENST00000433218 GPATCH8Q9UKJ3 1502 aaKnown RBP36.8■■■■□ 3.48
HOMER3-203ENST00000433218 MLH3Q9UHC1 1453 aa36.78■■■■□ 3.48
HOMER3-203ENST00000433218 ILDR1Q86SU0 546 aaPredicted RBP36.76■■■■□ 3.48
HOMER3-203ENST00000433218 TIAM1Q13009 1591 aa36.75■■■■□ 3.47
HOMER3-203ENST00000433218 PREX1Q8TCU6 1659 aa36.71■■■■□ 3.47
HOMER3-203ENST00000433218 EHBP1L1Q8N3D4 1523 aa36.7■■■■□ 3.47
HOMER3-203ENST00000433218 C3P01024 1663 aa36.7■■■■□ 3.46
HOMER3-203ENST00000433218 INO80Q9ULG1 1556 aaPredicted RBP36.67■■■■□ 3.46
HOMER3-203ENST00000433218 MYT1LQ9UL68 1186 aa36.66■■■■□ 3.46
HOMER3-203ENST00000433218 SUPT6HQ7KZ85 1726 aaKnown RBP36.64■■■■□ 3.46
HOMER3-203ENST00000433218 HSPA2P54652 639 aa36.64■■■■□ 3.46
HOMER3-203ENST00000433218 ZNF777Q9ULD5 760 aaPredicted RBP36.64■■■■□ 3.46
HOMER3-203ENST00000433218 AGLP35573 1532 aa36.63■■■■□ 3.45
HOMER3-203ENST00000433218 MTUS2Q5JR59 1369 aa36.63■■■■□ 3.45
HOMER3-203ENST00000433218 ATP7AQ04656 1500 aa36.6■■■■□ 3.45
HOMER3-203ENST00000433218 CEBPAP49715 358 aaPredicted RBP36.59■■■■□ 3.45
HOMER3-203ENST00000433218 CCNB3Q8WWL7 1395 aa36.57■■■■□ 3.45
HOMER3-203ENST00000433218 PLXNC1O60486 1568 aa36.55■■■■□ 3.44
HOMER3-203ENST00000433218 HNRNPMP52272 730 aaKnown RBP eCLIP36.54■■■■□ 3.44
HOMER3-203ENST00000433218 KIAA1107Q9UPP5 1409 aa36.49■■■■□ 3.43
HOMER3-203ENST00000433218 CFDP1Q9UEE9 299 aaPredicted RBP36.49■■■■□ 3.43
HOMER3-203ENST00000433218 STRCQ7RTU9 1775 aa36.49■■■■□ 3.43
HOMER3-203ENST00000433218 ADGBQ8N7X0 1667 aa36.48■■■■□ 3.43
HOMER3-203ENST00000433218 PLEKHH2Q8IVE3 1493 aa36.48■■■■□ 3.43
HOMER3-203ENST00000433218 LOC105371045A0A1W2PR82 267 aa36.48■■■■□ 3.43
HOMER3-203ENST00000433218 ZNF644Q9H582 1327 aaPredicted RBP36.47■■■■□ 3.43
HOMER3-203ENST00000433218 SETD1BQ9UPS6 1966 aaKnown RBP36.46■■■■□ 3.43
HOMER3-203ENST00000433218 MROH2AA6NES4 1674 aa36.45■■■■□ 3.43
HOMER3-203ENST00000433218 CLTCQ00610 1675 aaKnown RBP36.45■■■■□ 3.43
HOMER3-203ENST00000433218 SPAG9O60271 1321 aaKnown RBP36.44■■■■□ 3.42
HOMER3-203ENST00000433218 NCOA2Q15596 1464 aa36.44■■■■□ 3.42
HOMER3-203ENST00000433218 MBD5Q9P267 1494 aa36.42■■■■□ 3.42
HOMER3-203ENST00000433218 VPS8Q8N3P4 1428 aa36.38■■■■□ 3.41
HOMER3-203ENST00000433218 A2MP01023 1474 aa36.37■■■■□ 3.41
HOMER3-203ENST00000433218 CAMSAP2Q08AD1 1489 aa36.37■■■■□ 3.41
HOMER3-203ENST00000433218 UHRF1BP1Q6BDS2 1440 aa36.34■■■■□ 3.41
HOMER3-203ENST00000433218 LRRC9Q6ZRR7 1453 aa36.28■■■■□ 3.4
HOMER3-203ENST00000433218 CNTLNQ9NXG0 1405 aa36.27■■■■□ 3.4
HOMER3-203ENST00000433218 MYO3AQ8NEV4 1616 aa36.25■■■■□ 3.39
HOMER3-203ENST00000433218 CCDC141Q6ZP82 1450 aa36.25■■■■□ 3.39
HOMER3-203ENST00000433218 ZNF142P52746 1687 aaPredicted RBP36.21■■■■□ 3.39
HOMER3-203ENST00000433218 ARHGEF5Q12774 1597 aa36.2■■■■□ 3.39
HOMER3-203ENST00000433218 ESF1Q9H501 851 aaKnown RBP36.19■■■■□ 3.38
HOMER3-203ENST00000433218 FBXO41Q8TF61 875 aa36.18■■■■□ 3.38
HOMER3-203ENST00000433218 RTEL1-TNFRSF6BF6WH68 1400 aa36.16■■■■□ 3.38
HOMER3-203ENST00000433218 ZMYM3Q14202 1370 aa36.14■■■■□ 3.38
HOMER3-203ENST00000433218 KANK4Q5T7N3 995 aaPredicted RBP36.13■■■■□ 3.37
HOMER3-203ENST00000433218 NPATQ14207 1427 aa36.12■■■■□ 3.37
HOMER3-203ENST00000433218 MAP3K1Q13233 1512 aa36.12■■■■□ 3.37
HOMER3-203ENST00000433218 CAMSAP1Q5T5Y3 1602 aa36.1■■■■□ 3.37
HOMER3-203ENST00000433218 GGT6Q6P531 493 aa36.09■■■■□ 3.37
HOMER3-203ENST00000433218 PTPRKQ15262 1439 aa36.08■■■■□ 3.37
HOMER3-203ENST00000433218 CEP170BQ9Y4F5 1589 aaPredicted RBP36.07■■■■□ 3.36
HOMER3-203ENST00000433218 NCOA1Q15788 1441 aa36.07■■■■□ 3.36
HOMER3-203ENST00000433218 DHX29Q7Z478 1369 aaKnown RBP36.05■■■■□ 3.36
HOMER3-203ENST00000433218 MAST1Q9Y2H9 1570 aa36.05■■■■□ 3.36
HOMER3-203ENST00000433218 CROCC2H7BZ55 1655 aa36.03■■■■□ 3.36
HOMER3-203ENST00000433218 KDM5DQ9BY66 1539 aa36■■■■□ 3.35
HOMER3-203ENST00000433218 MYOM3Q5VTT5 1437 aa35.99■■■■□ 3.35
HOMER3-203ENST00000433218 RNF17Q9BXT8 1623 aaKnown RBP35.99■■■■□ 3.35
HOMER3-203ENST00000433218 CERKQ8TCT0 537 aa35.97■■■■□ 3.35
HOMER3-203ENST00000433218 PTPRTO14522 1441 aa35.95■■■■□ 3.35
HOMER3-203ENST00000433218 MROH1Q8NDA8 1641 aa35.94■■■■□ 3.34
HOMER3-203ENST00000433218 LTBP4Q8N2S1 1624 aa35.93■■■■□ 3.34
HOMER3-203ENST00000433218 CEP152O94986 1710 aa35.92■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms