RNA–Protein interactions for RNA: ENST00000432725.1

SF1-208, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-208ENST00000432725 ARHGEF40Q8TER5 1519 aa24.86■■□□□ 1.57
SF1-208ENST00000432725 MAGI2Q86UL8 1455 aa24.86■■□□□ 1.57
SF1-208ENST00000432725 ARHGAP5Q13017 1502 aa24.82■■□□□ 1.56
SF1-208ENST00000432725 ZFYVE16Q7Z3T8 1539 aa24.81■■□□□ 1.56
SF1-208ENST00000432725 YEATS2Q9ULM3 1422 aa24.8■■□□□ 1.56
SF1-208ENST00000432725 ADAMTSL3P82987 1691 aa24.8■■□□□ 1.56
SF1-208ENST00000432725 ARID4BQ4LE39 1312 aaPredicted RBP24.8■■□□□ 1.56
SF1-208ENST00000432725 CEP162Q5TB80 1403 aa24.79■■□□□ 1.56
SF1-208ENST00000432725 ZNF518AQ6AHZ1 1483 aa24.76■■□□□ 1.55
SF1-208ENST00000432725 BCORL1Q5H9F3 1711 aa24.75■■□□□ 1.55
SF1-208ENST00000432725 PREX2Q70Z35 1606 aa24.75■■□□□ 1.55
SF1-208ENST00000432725 CDC42BPBQ9Y5S2 1711 aa24.74■■□□□ 1.55
SF1-208ENST00000432725 PTPRMP28827 1452 aa24.73■■□□□ 1.55
SF1-208ENST00000432725 AFAP1Q8N556 730 aa24.72■■□□□ 1.55
SF1-208ENST00000432725 KDM5CP41229 1560 aa24.71■■□□□ 1.55
SF1-208ENST00000432725 ATP10AO60312 1499 aa24.7■■□□□ 1.55
SF1-208ENST00000432725 ABCC1P33527 1531 aa24.68■■□□□ 1.54
SF1-208ENST00000432725 GPATCH8Q9UKJ3 1502 aaKnown RBP24.68■■□□□ 1.54
SF1-208ENST00000432725 MADDQ8WXG6 1647 aa24.68■■□□□ 1.54
SF1-208ENST00000432725 HECW2Q9P2P5 1572 aa24.67■■□□□ 1.54
SF1-208ENST00000432725 ARHGEF12Q9NZN5 1544 aa24.67■■□□□ 1.54
SF1-208ENST00000432725 C9orf84Q5VXU9 1444 aa24.67■■□□□ 1.54
SF1-208ENST00000432725 MTUS2Q5JR59 1369 aa24.67■■□□□ 1.54
SF1-208ENST00000432725 SIGLEC1Q9BZZ2 1709 aa24.66■■□□□ 1.54
SF1-208ENST00000432725 CDC42BPAQ5VT25 1732 aa24.66■■□□□ 1.54
SF1-208ENST00000432725 MLH3Q9UHC1 1453 aa24.65■■□□□ 1.54
SF1-208ENST00000432725 TRAPPC8Q9Y2L5 1435 aa24.65■■□□□ 1.54
SF1-208ENST00000432725 CCNB3Q8WWL7 1395 aa24.61■■□□□ 1.53
SF1-208ENST00000432725 ITSN2Q9NZM3 1697 aa24.59■■□□□ 1.53
SF1-208ENST00000432725 CFDP1Q9UEE9 299 aaPredicted RBP24.59■■□□□ 1.53
SF1-208ENST00000432725 ZNF777Q9ULD5 760 aaPredicted RBP24.59■■□□□ 1.53
SF1-208ENST00000432725 EHBP1L1Q8N3D4 1523 aa24.59■■□□□ 1.53
SF1-208ENST00000432725 SAMD9LQ8IVG5 1584 aa24.59■■□□□ 1.53
SF1-208ENST00000432725 MLECQ14165 292 aa24.58■■□□□ 1.53
SF1-208ENST00000432725 MYT1LQ9UL68 1186 aa24.58■■□□□ 1.53
SF1-208ENST00000432725 DIP2CQ9Y2E4 1556 aa24.58■■□□□ 1.52
SF1-208ENST00000432725 KIAA1107Q9UPP5 1409 aa24.57■■□□□ 1.52
SF1-208ENST00000432725 REREQ9P2R6 1566 aa24.57■■□□□ 1.52
SF1-208ENST00000432725 RIMS1Q86UR5 1692 aaKnown RBP24.56■■□□□ 1.52
SF1-208ENST00000432725 PLEKHH2Q8IVE3 1493 aa24.55■■□□□ 1.52
SF1-208ENST00000432725 VPS8Q8N3P4 1428 aa24.54■■□□□ 1.52
SF1-208ENST00000432725 SYCP2Q9BX26 1530 aa24.53■■□□□ 1.52
SF1-208ENST00000432725 HNRNPMP52272 730 aaKnown RBP eCLIP24.53■■□□□ 1.52
SF1-208ENST00000432725 ABCA6Q8N139 1617 aa24.53■■□□□ 1.52
SF1-208ENST00000432725 TIAM1Q13009 1591 aa24.51■■□□□ 1.51
SF1-208ENST00000432725 AGLP35573 1532 aa24.5■■□□□ 1.51
SF1-208ENST00000432725 SPAG9O60271 1321 aaKnown RBP24.49■■□□□ 1.51
SF1-208ENST00000432725 KIDINS220Q9ULH0 1771 aa24.49■■□□□ 1.51
SF1-208ENST00000432725 FER1L4A9Z1Z3 1794 aa24.47■■□□□ 1.51
SF1-208ENST00000432725 LMTK3Q96Q04 1460 aa24.46■■□□□ 1.51
SF1-208ENST00000432725 NCOA2Q15596 1464 aa24.45■■□□□ 1.51
SF1-208ENST00000432725 ZNF644Q9H582 1327 aaPredicted RBP24.45■■□□□ 1.5
SF1-208ENST00000432725 MBD5Q9P267 1494 aa24.43■■□□□ 1.5
SF1-208ENST00000432725 PLPPR3Q6T4P5 718 aa24.42■■□□□ 1.5
SF1-208ENST00000432725 ATP7AQ04656 1500 aa24.41■■□□□ 1.5
SF1-208ENST00000432725 MAP3K1Q13233 1512 aa24.41■■□□□ 1.5
SF1-208ENST00000432725 LRRC9Q6ZRR7 1453 aa24.41■■□□□ 1.5
SF1-208ENST00000432725 SUPT6HQ7KZ85 1726 aaKnown RBP24.41■■□□□ 1.5
SF1-208ENST00000432725 INO80Q9ULG1 1556 aaPredicted RBP24.4■■□□□ 1.5
SF1-208ENST00000432725 CEBPAP49715 358 aaPredicted RBP24.37■■□□□ 1.49
SF1-208ENST00000432725 RTEL1-TNFRSF6BF6WH68 1400 aa24.35■■□□□ 1.49
SF1-208ENST00000432725 A2MP01023 1474 aa24.34■■□□□ 1.49
SF1-208ENST00000432725 KANK4Q5T7N3 995 aaPredicted RBP24.34■■□□□ 1.49
SF1-208ENST00000432725 RSPH4AQ5TD94 716 aa24.33■■□□□ 1.49
SF1-208ENST00000432725 ESF1Q9H501 851 aaKnown RBP24.33■■□□□ 1.49
SF1-208ENST00000432725 PLXNC1O60486 1568 aa24.33■■□□□ 1.48
SF1-208ENST00000432725 CAMSAP2Q08AD1 1489 aa24.32■■□□□ 1.48
SF1-208ENST00000432725 CNTLNQ9NXG0 1405 aa24.32■■□□□ 1.48
SF1-208ENST00000432725 HSPA2P54652 639 aa24.31■■□□□ 1.48
SF1-208ENST00000432725 CCDC141Q6ZP82 1450 aa24.29■■□□□ 1.48
SF1-208ENST00000432725 ADGBQ8N7X0 1667 aa24.25■■□□□ 1.47
SF1-208ENST00000432725 ARHGEF5Q12774 1597 aa24.25■■□□□ 1.47
SF1-208ENST00000432725 C3P01024 1663 aa24.24■■□□□ 1.47
SF1-208ENST00000432725 PREX1Q8TCU6 1659 aa24.24■■□□□ 1.47
SF1-208ENST00000432725 DHX29Q7Z478 1369 aaKnown RBP24.24■■□□□ 1.47
SF1-208ENST00000432725 PPP6R1Q9UPN7 881 aa24.23■■□□□ 1.47
SF1-208ENST00000432725 MIA2Q96PC5 1412 aa24.23■■□□□ 1.47
SF1-208ENST00000432725 MYOM3Q5VTT5 1437 aa24.22■■□□□ 1.47
SF1-208ENST00000432725 UHRF1BP1Q6BDS2 1440 aa24.22■■□□□ 1.47
SF1-208ENST00000432725 ZMYM3Q14202 1370 aa24.21■■□□□ 1.47
SF1-208ENST00000432725 APLP2Q06481 763 aa24.21■■□□□ 1.47
SF1-208ENST00000432725 TRIM26Q12899 539 aaPredicted RBP24.21■■□□□ 1.47
SF1-208ENST00000432725 ILDR1Q86SU0 546 aaPredicted RBP24.21■■□□□ 1.47
SF1-208ENST00000432725 TSPY4P0CV99 314 aa24.2■■□□□ 1.46
SF1-208ENST00000432725 TSPY10P0CW01 314 aa24.2■■□□□ 1.46
SF1-208ENST00000432725 GGT6Q6P531 493 aa24.2■■□□□ 1.46
SF1-208ENST00000432725 MROH2AA6NES4 1674 aa24.19■■□□□ 1.46
SF1-208ENST00000432725 NPATQ14207 1427 aa24.18■■□□□ 1.46
SF1-208ENST00000432725 SETD1BQ9UPS6 1966 aaKnown RBP24.15■■□□□ 1.46
SF1-208ENST00000432725 MAST1Q9Y2H9 1570 aa24.12■■□□□ 1.45
SF1-208ENST00000432725 CLTCQ00610 1675 aaKnown RBP24.12■■□□□ 1.45
SF1-208ENST00000432725 KIF3BO15066 747 aa24.12■■□□□ 1.45
SF1-208ENST00000432725 PTPRKQ15262 1439 aa24.1■■□□□ 1.45
SF1-208ENST00000432725 DMRT2Q9Y5R5 561 aa24.08■■□□□ 1.45
SF1-208ENST00000432725 FAM135AQ9P2D6 1515 aa24.07■■□□□ 1.44
SF1-208ENST00000432725 STRCQ7RTU9 1775 aa24.03■■□□□ 1.44
SF1-208ENST00000432725 FGD6Q6ZV73 1430 aa24.03■■□□□ 1.44
SF1-208ENST00000432725 KDM5DQ9BY66 1539 aa24.03■■□□□ 1.44
SF1-208ENST00000432725 ABCC5O15440 1437 aa24.02■■□□□ 1.44
SF1-208ENST00000432725 TCOF1Q13428 1488 aaKnown RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms