RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 EIF5BO60841 1220 aaKnown RBP12.89□□□□□ -0.35
FN1-209ENST00000432072 CHMP4BQ9H444 224 aaKnown RBP12.88□□□□□ -0.35
FN1-209ENST00000432072 SPAG9O60271 1321 aaKnown RBP12.87□□□□□ -0.35
FN1-209ENST00000432072 MORC1Q86VD1 984 aa12.86□□□□□ -0.35
FN1-209ENST00000432072 FAM69CQ0P6D2 419 aa12.86□□□□□ -0.35
FN1-209ENST00000432072 JPH4Q96JJ6 628 aa12.85□□□□□ -0.35
FN1-209ENST00000432072 GTF2E1P29083 439 aaPredicted RBP12.85□□□□□ -0.35
FN1-209ENST00000432072 ARHGAP35Q9NRY4 1499 aa12.85□□□□□ -0.35
FN1-209ENST00000432072 TAF7LQ5H9L4 462 aa12.83□□□□□ -0.36
FN1-209ENST00000432072 NUTM2FA1L443 756 aa12.82□□□□□ -0.36
FN1-209ENST00000432072 TPRNQ4KMQ1 711 aa12.81□□□□□ -0.36
FN1-209ENST00000432072 ABCC8Q09428 1581 aa12.81□□□□□ -0.36
FN1-209ENST00000432072 HNRNPMP52272 730 aaKnown RBP eCLIP12.81□□□□□ -0.36
FN1-209ENST00000432072 FRAT1Q92837 279 aaPredicted RBP12.81□□□□□ -0.36
FN1-209ENST00000432072 NUTM2DQ5VT03 806 aaPredicted RBP12.81□□□□□ -0.36
FN1-209ENST00000432072 KLHL34Q8N239 644 aa12.81□□□□□ -0.36
FN1-209ENST00000432072 SENP3-EIF4A1A0A087X0R7 540 aa12.8□□□□□ -0.36
FN1-209ENST00000432072 MS4A1P11836 297 aa12.8□□□□□ -0.36
FN1-209ENST00000432072 CCDC88BA6NC98 1476 aa12.8□□□□□ -0.36
FN1-209ENST00000432072 AMPHP49418 695 aa12.8□□□□□ -0.36
FN1-209ENST00000432072 CHMP3Q9Y3E7 222 aa12.8□□□□□ -0.36
FN1-209ENST00000432072 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.8□□□□□ -0.36
FN1-209ENST00000432072 FMN1Q68DA7 1419 aa12.8□□□□□ -0.36
FN1-209ENST00000432072 BECN1Q14457 450 aa12.79□□□□□ -0.36
FN1-209ENST00000432072 LTV1Q96GA3 475 aaPredicted RBP12.78□□□□□ -0.36
FN1-209ENST00000432072 CADPSQ9ULU8 1353 aa12.77□□□□□ -0.36
FN1-209ENST00000432072 CCDC18Q5T9S5 1454 aa12.77□□□□□ -0.37
FN1-209ENST00000432072 ANKRD30AQ9BXX3 1397 aa12.77□□□□□ -0.37
FN1-209ENST00000432072 ATF3P18847 181 aa12.77□□□□□ -0.37
FN1-209ENST00000432072 CHMP4AQ9BY43 222 aa12.77□□□□□ -0.37
FN1-209ENST00000432072 GORABQ5T7V8 394 aa12.76□□□□□ -0.37
FN1-209ENST00000432072 EIF3AQ14152 1382 aaKnown RBP12.76□□□□□ -0.37
FN1-209ENST00000432072 FOXD1Q16676 465 aa12.76□□□□□ -0.37
FN1-209ENST00000432072 FANCD2Q9BXW9 1451 aa12.76□□□□□ -0.37
FN1-209ENST00000432072 GOLGA6L22H0YM25 854 aa12.76□□□□□ -0.37
FN1-209ENST00000432072 PKD2Q13563 968 aa12.76□□□□□ -0.37
FN1-209ENST00000432072 TNIKQ9UKE5 1360 aa12.76□□□□□ -0.37
FN1-209ENST00000432072 RSPH4AQ5TD94 716 aa12.75□□□□□ -0.37
FN1-209ENST00000432072 TERF2IPQ9NYB0 399 aa12.75□□□□□ -0.37
FN1-209ENST00000432072 NUP155O75694 1391 aa12.75□□□□□ -0.37
FN1-209ENST00000432072 FRAT2O75474 233 aaPredicted RBP12.75□□□□□ -0.37
FN1-209ENST00000432072 SMARCA4P51532 1647 aa12.75□□□□□ -0.37
FN1-209ENST00000432072 CALD1Q05682 793 aaKnown RBP12.75□□□□□ -0.37
FN1-209ENST00000432072 ROCK2O75116 1388 aaKnown RBP12.75□□□□□ -0.37
FN1-209ENST00000432072 MROH2BQ7Z745 1585 aa12.75□□□□□ -0.37
FN1-209ENST00000432072 SF3B2Q13435 895 aaKnown RBP12.74□□□□□ -0.37
FN1-209ENST00000432072 IRX6P78412 446 aaPredicted RBP12.74□□□□□ -0.37
FN1-209ENST00000432072 PSME1Q06323 249 aa12.73□□□□□ -0.37
FN1-209ENST00000432072 SYTL4Q96C24 671 aaPredicted RBP12.72□□□□□ -0.37
FN1-209ENST00000432072 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
FN1-209ENST00000432072 PTPRGP23470 1445 aa12.72□□□□□ -0.37
FN1-209ENST00000432072 GNL2Q13823 731 aaKnown RBP12.71□□□□□ -0.37
FN1-209ENST00000432072 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.7□□□□□ -0.38
FN1-209ENST00000432072 C1orf141Q5JVX7 400 aa12.69□□□□□ -0.38
FN1-209ENST00000432072 U2AF1L5P0DN76 240 aaPredicted RBP12.67□□□□□ -0.38
FN1-209ENST00000432072 U2AF1Q01081 240 aaKnown RBP eCLIP12.67□□□□□ -0.382e-9■■□□□ 12.6
FN1-209ENST00000432072 STK31Q9BXU1 1019 aa12.67□□□□□ -0.38
FN1-209ENST00000432072 SIN3AQ96ST3 1273 aa12.67□□□□□ -0.38
FN1-209ENST00000432072 MCCP23508 829 aa12.67□□□□□ -0.38
FN1-209ENST00000432072 KIAA1211Q6ZU35 1233 aa12.66□□□□□ -0.38
FN1-209ENST00000432072 GPATCH3Q96I76 525 aa12.65□□□□□ -0.38
FN1-209ENST00000432072 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
FN1-209ENST00000432072 HDAC5Q9UQL6 1122 aa12.65□□□□□ -0.38
FN1-209ENST00000432072 RAPGEF2Q9Y4G8 1499 aa12.65□□□□□ -0.38
FN1-209ENST00000432072 UACAQ9BZF9 1416 aa12.64□□□□□ -0.39
FN1-209ENST00000432072 TRIM34Q9BYJ4 488 aa12.64□□□□□ -0.39
FN1-209ENST00000432072 IPO8O15397 1037 aaKnown RBP12.64□□□□□ -0.39
FN1-209ENST00000432072 CWC22Q9HCG8 908 aaKnown RBP12.63□□□□□ -0.39
FN1-209ENST00000432072 TRAK1Q9UPV9 953 aa12.63□□□□□ -0.39
FN1-209ENST00000432072 APBB1O00213 710 aa12.63□□□□□ -0.39
FN1-209ENST00000432072 VGFO15240 615 aaPredicted RBP12.62□□□□□ -0.39
FN1-209ENST00000432072 GAPVD1Q14C86 1478 aa12.62□□□□□ -0.39
FN1-209ENST00000432072 HSP90AB1P08238 724 aaKnown RBP12.62□□□□□ -0.39
FN1-209ENST00000432072 KRI1Q8N9T8 703 aaKnown RBP12.62□□□□□ -0.39
FN1-209ENST00000432072 GOLGA6L4A6NEF3 574 aa12.61□□□□□ -0.39
FN1-209ENST00000432072 PPP1R1BQ9UD71 204 aaPredicted RBP12.61□□□□□ -0.39
FN1-209ENST00000432072 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.61□□□□□ -0.39
FN1-209ENST00000432072 PIP4K2BP78356 416 aa12.61□□□□□ -0.39
FN1-209ENST00000432072 ATAD2BQ9ULI0 1458 aa12.6□□□□□ -0.39
FN1-209ENST00000432072 KTN1Q86UP2 1357 aaKnown RBP12.6□□□□□ -0.39
FN1-209ENST00000432072 NBR1Q14596 966 aa12.6□□□□□ -0.39
FN1-209ENST00000432072 GOLGA6L6A8MZA4 724 aa12.6□□□□□ -0.39
FN1-209ENST00000432072 CTDP1Q9Y5B0 961 aaPredicted RBP12.6□□□□□ -0.39
FN1-209ENST00000432072 SETD5Q9C0A6 1442 aa12.6□□□□□ -0.39
FN1-209ENST00000432072 PTMAP06454 111 aaKnown RBP12.6□□□□□ -0.39
FN1-209ENST00000432072 VPS53Q5VIR6 699 aa12.6□□□□□ -0.39
FN1-209ENST00000432072 CC2D2AQ9P2K1 1620 aa12.6□□□□□ -0.39
FN1-209ENST00000432072 PRM3Q9NNZ6 103 aa12.6□□□□□ -0.39
FN1-209ENST00000432072 MPHOSPH9Q99550 1183 aa12.59□□□□□ -0.39
FN1-209ENST00000432072 FBXW7Q969H0 707 aa12.59□□□□□ -0.39
FN1-209ENST00000432072 TTC5Q8N0Z6 440 aa12.59□□□□□ -0.39
FN1-209ENST00000432072 COG3Q96JB2 828 aa12.59□□□□□ -0.39
FN1-209ENST00000432072 NOL10Q9BSC4 688 aaKnown RBP12.59□□□□□ -0.39
FN1-209ENST00000432072 FHOD3Q2V2M9 1422 aa12.58□□□□□ -0.4
FN1-209ENST00000432072 LMOD3Q0VAK6 560 aa12.58□□□□□ -0.4
FN1-209ENST00000432072 TRIM44Q96DX7 344 aaPredicted RBP12.58□□□□□ -0.4
FN1-209ENST00000432072 CFAP44Q96MT7 982 aa12.58□□□□□ -0.4
FN1-209ENST00000432072 ANP32EQ9BTT0 268 aa12.58□□□□□ -0.4
FN1-209ENST00000432072 RGS3P49796 1198 aa12.57□□□□□ -0.4
FN1-209ENST00000432072 SLC4A10Q6U841 1118 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms