RNA–Protein interactions for RNA: ENST00000431329.5

GAPVD1-208, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-208ENST00000431329 CHD1O14646 1710 aa9.99□□□□□ -0.81
GAPVD1-208ENST00000431329 TONSLQ96HA7 1378 aa9.99□□□□□ -0.81
GAPVD1-208ENST00000431329 CARMIL2Q6F5E8 1435 aa9.98□□□□□ -0.81
GAPVD1-208ENST00000431329 DAPK1P53355 1430 aa9.98□□□□□ -0.81
GAPVD1-208ENST00000431329 DDX10Q13206 875 aaKnown RBP9.97□□□□□ -0.81
GAPVD1-208ENST00000431329 MIA2Q96PC5 1412 aa9.97□□□□□ -0.81
GAPVD1-208ENST00000431329 DENND4BO75064 1496 aaPredicted RBP9.97□□□□□ -0.81
GAPVD1-208ENST00000431329 PPP1R15AO75807 674 aaPredicted RBP9.97□□□□□ -0.81
GAPVD1-208ENST00000431329 KCNH8Q96L42 1107 aa9.97□□□□□ -0.81
GAPVD1-208ENST00000431329 CDK11AQ9UQ88 783 aaPredicted RBP9.97□□□□□ -0.81
GAPVD1-208ENST00000431329 ABCC5O15440 1437 aa9.96□□□□□ -0.81
GAPVD1-208ENST00000431329 TROQ12816 1431 aaPredicted RBP9.96□□□□□ -0.81
GAPVD1-208ENST00000431329 CFDP1Q9UEE9 299 aaPredicted RBP9.96□□□□□ -0.82
GAPVD1-208ENST00000431329 DNMT1P26358 1616 aaKnown RBP9.95□□□□□ -0.82
GAPVD1-208ENST00000431329 CAMSAP2Q08AD1 1489 aa9.95□□□□□ -0.82
GAPVD1-208ENST00000431329 MPHOSPH9Q99550 1183 aa9.93□□□□□ -0.82
GAPVD1-208ENST00000431329 GPATCH8Q9UKJ3 1502 aaKnown RBP9.93□□□□□ -0.82
GAPVD1-208ENST00000431329 ABCA8O94911 1581 aa9.93□□□□□ -0.82
GAPVD1-208ENST00000431329 ERCC6L2Q5T890 1561 aa9.93□□□□□ -0.82
GAPVD1-208ENST00000431329 ATP10BO94823 1461 aa9.92□□□□□ -0.82
GAPVD1-208ENST00000431329 ITSN2Q9NZM3 1697 aa9.92□□□□□ -0.82
GAPVD1-208ENST00000431329 CDC42BPAQ5VT25 1732 aa9.92□□□□□ -0.82
GAPVD1-208ENST00000431329 KDM5BQ9UGL1 1544 aa9.91□□□□□ -0.82
GAPVD1-208ENST00000431329 PLEKHD1A6NEE1 506 aa9.91□□□□□ -0.82
GAPVD1-208ENST00000431329 RTN4Q9NQC3 1192 aaKnown RBP9.91□□□□□ -0.82
GAPVD1-208ENST00000431329 ADCY10Q96PN6 1610 aa9.9□□□□□ -0.82
GAPVD1-208ENST00000431329 PTPRGP23470 1445 aa9.9□□□□□ -0.82
GAPVD1-208ENST00000431329 NCBP3Q53F19 620 aaKnown RBP9.9□□□□□ -0.83
GAPVD1-208ENST00000431329 AKNAQ7Z591 1439 aa9.89□□□□□ -0.83
GAPVD1-208ENST00000431329 SLC4A1APQ9BWU0 796 aaKnown RBP9.89□□□□□ -0.83
GAPVD1-208ENST00000431329 CROCC2H7BZ55 1655 aa9.88□□□□□ -0.83
GAPVD1-208ENST00000431329 HNRNPMP52272 730 aaKnown RBP eCLIP9.88□□□□□ -0.836e-13■■■■■ 43.1
GAPVD1-208ENST00000431329 TIMELESSQ9UNS1 1208 aa9.88□□□□□ -0.83
GAPVD1-208ENST00000431329 ADGBQ8N7X0 1667 aa9.87□□□□□ -0.83
GAPVD1-208ENST00000431329 L3MBTL2Q969R5 705 aa9.87□□□□□ -0.83
GAPVD1-208ENST00000431329 ROCK1Q13464 1354 aa9.87□□□□□ -0.83
GAPVD1-208ENST00000431329 ABCC10Q5T3U5 1492 aa9.86□□□□□ -0.83
GAPVD1-208ENST00000431329 NCOA1Q15788 1441 aa9.85□□□□□ -0.83
GAPVD1-208ENST00000431329 PZPP20742 1482 aa9.84□□□□□ -0.83
GAPVD1-208ENST00000431329 HSPA5P11021 654 aaKnown RBP9.84□□□□□ -0.83
GAPVD1-208ENST00000431329 ZNF326Q5BKZ1 582 aaKnown RBP9.84□□□□□ -0.83
GAPVD1-208ENST00000431329 CDC42BPBQ9Y5S2 1711 aa9.83□□□□□ -0.84
GAPVD1-208ENST00000431329 TTC37Q6PGP7 1564 aa9.83□□□□□ -0.84
GAPVD1-208ENST00000431329 ANKRD30BQ9BXX2 1392 aa9.83□□□□□ -0.84
GAPVD1-208ENST00000431329 C9orf84Q5VXU9 1444 aa9.83□□□□□ -0.84
GAPVD1-208ENST00000431329 SHROOM2Q13796 1616 aa9.82□□□□□ -0.84
GAPVD1-208ENST00000431329 NBPF8Q3BBV2 869 aa9.82□□□□□ -0.84
GAPVD1-208ENST00000431329 PKD2Q13563 968 aa9.82□□□□□ -0.84
GAPVD1-208ENST00000431329 SAMD9LQ8IVG5 1584 aa9.81□□□□□ -0.84
GAPVD1-208ENST00000431329 ANKRD30AQ9BXX3 1397 aa9.81□□□□□ -0.84
GAPVD1-208ENST00000431329 ANKRD50Q9ULJ7 1429 aa9.81□□□□□ -0.84
GAPVD1-208ENST00000431329 RPRD2Q5VT52 1461 aaKnown RBP9.8□□□□□ -0.84
GAPVD1-208ENST00000431329 SUPT16HQ9Y5B9 1047 aaKnown RBP9.8□□□□□ -0.84
GAPVD1-208ENST00000431329 ADGRL2O95490 1459 aa9.79□□□□□ -0.84
GAPVD1-208ENST00000431329 TEX14Q8IWB6 1497 aa9.79□□□□□ -0.84
GAPVD1-208ENST00000431329 SYCP2Q9BX26 1530 aa9.79□□□□□ -0.84
GAPVD1-208ENST00000431329 PREX2Q70Z35 1606 aa9.79□□□□□ -0.84
GAPVD1-208ENST00000431329 TSPY4P0CV99 314 aa9.79□□□□□ -0.84
GAPVD1-208ENST00000431329 TSPY10P0CW01 314 aa9.79□□□□□ -0.84
GAPVD1-208ENST00000431329 NUP155O75694 1391 aa9.79□□□□□ -0.84
GAPVD1-208ENST00000431329 ARHGAP5Q13017 1502 aa9.79□□□□□ -0.84
GAPVD1-208ENST00000431329 WASHC2AQ641Q2 1341 aa9.79□□□□□ -0.84
GAPVD1-208ENST00000431329 CNGB1Q14028 1251 aaPredicted RBP9.79□□□□□ -0.84
GAPVD1-208ENST00000431329 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.78□□□□□ -0.84
GAPVD1-208ENST00000431329 KIF15Q9NS87 1388 aa9.78□□□□□ -0.84
GAPVD1-208ENST00000431329 C11orf95C9JLR9 678 aaPredicted RBP9.78□□□□□ -0.84
GAPVD1-208ENST00000431329 ANP32CO43423 234 aa9.78□□□□□ -0.84
GAPVD1-208ENST00000431329 ABCC2Q92887 1545 aa9.78□□□□□ -0.84
GAPVD1-208ENST00000431329 EIF4G2P78344 907 aaKnown RBP eCLIP9.77□□□□□ -0.85
GAPVD1-208ENST00000431329 MBD5Q9P267 1494 aa9.77□□□□□ -0.85
GAPVD1-208ENST00000431329 ZCCHC11Q5TAX3 1644 aaKnown RBP9.77□□□□□ -0.85
GAPVD1-208ENST00000431329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.77□□□□□ -0.854e-9■□□□□ 10.4
GAPVD1-208ENST00000431329 KIAA1107Q9UPP5 1409 aa9.76□□□□□ -0.85
GAPVD1-208ENST00000431329 POLR3GLQ9BT43 218 aa9.76□□□□□ -0.85
GAPVD1-208ENST00000431329 CLASP1Q7Z460 1538 aa9.76□□□□□ -0.85
GAPVD1-208ENST00000431329 MYO5CQ9NQX4 1742 aa9.75□□□□□ -0.85
GAPVD1-208ENST00000431329 CCDC141Q6ZP82 1450 aa9.75□□□□□ -0.85
GAPVD1-208ENST00000431329 SHANK2Q9UPX8 1470 aa9.75□□□□□ -0.85
GAPVD1-208ENST00000431329 KDM2AQ9Y2K7 1162 aa9.75□□□□□ -0.85
GAPVD1-208ENST00000431329 ARHGEF5Q12774 1597 aa9.73□□□□□ -0.85
GAPVD1-208ENST00000431329 ARHGEF12Q9NZN5 1544 aa9.72□□□□□ -0.85
GAPVD1-208ENST00000431329 CCDC184Q52MB2 194 aa9.7□□□□□ -0.86
GAPVD1-208ENST00000431329 FAM135AQ9P2D6 1515 aa9.7□□□□□ -0.86
GAPVD1-208ENST00000431329 CCDC7Q96M83 1385 aa9.7□□□□□ -0.86
GAPVD1-208ENST00000431329 RGL3Q3MIN7 710 aa9.7□□□□□ -0.86
GAPVD1-208ENST00000431329 PLEKHH2Q8IVE3 1493 aa9.69□□□□□ -0.86
GAPVD1-208ENST00000431329 BCANQ96GW7 911 aa9.69□□□□□ -0.86
GAPVD1-208ENST00000431329 KIF7Q2M1P5 1343 aa9.69□□□□□ -0.86
GAPVD1-208ENST00000431329 BCORL1Q5H9F3 1711 aa9.69□□□□□ -0.86
GAPVD1-208ENST00000431329 DCAF11Q8TEB1 546 aa9.68□□□□□ -0.86
GAPVD1-208ENST00000431329 CNTLNQ9NXG0 1405 aa9.68□□□□□ -0.86
GAPVD1-208ENST00000431329 TRAPPC8Q9Y2L5 1435 aa9.68□□□□□ -0.86
GAPVD1-208ENST00000431329 CCER2I3L3R5 266 aa9.67□□□□□ -0.86
GAPVD1-208ENST00000431329 USP47Q96K76 1375 aa9.67□□□□□ -0.86
GAPVD1-208ENST00000431329 AFAP1Q8N556 730 aa9.67□□□□□ -0.86
GAPVD1-208ENST00000431329 KDM5DQ9BY66 1539 aa9.67□□□□□ -0.86
GAPVD1-208ENST00000431329 SPATA31E1Q6ZUB1 1445 aa9.66□□□□□ -0.86
GAPVD1-208ENST00000431329 SENP3-EIF4A1A0A087X0R7 540 aa9.66□□□□□ -0.86
GAPVD1-208ENST00000431329 FKBP8Q14318 412 aa9.66□□□□□ -0.86
GAPVD1-208ENST00000431329 MYT1LQ9UL68 1186 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms