RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 PTPRGP23470 1445 aa14.62□□□□□ -0.07
RPE-206ENST00000429921 TCOF1Q13428 1488 aaKnown RBP14.61□□□□□ -0.07
RPE-206ENST00000429921 TROQ12816 1431 aaPredicted RBP14.61□□□□□ -0.07
RPE-206ENST00000429921 ATP10BO94823 1461 aa14.6□□□□□ -0.07
RPE-206ENST00000429921 ABCC5O15440 1437 aa14.59□□□□□ -0.07
RPE-206ENST00000429921 KCNH8Q96L42 1107 aa14.59□□□□□ -0.07
RPE-206ENST00000429921 UACAQ9BZF9 1416 aa14.58□□□□□ -0.07
RPE-206ENST00000429921 DAPK1P53355 1430 aa14.58□□□□□ -0.08
RPE-206ENST00000429921 MIA2Q96PC5 1412 aa14.58□□□□□ -0.08
RPE-206ENST00000429921 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.08
RPE-206ENST00000429921 GPATCH8Q9UKJ3 1502 aaKnown RBP14.56□□□□□ -0.08
RPE-206ENST00000429921 PPP1R15AO75807 674 aaPredicted RBP14.56□□□□□ -0.08
RPE-206ENST00000429921 HNRNPMP52272 730 aaKnown RBP eCLIP14.56□□□□□ -0.08
RPE-206ENST00000429921 MPHOSPH9Q99550 1183 aa14.56□□□□□ -0.08
RPE-206ENST00000429921 TONSLQ96HA7 1378 aa14.56□□□□□ -0.08
RPE-206ENST00000429921 ABCA8O94911 1581 aa14.55□□□□□ -0.08
RPE-206ENST00000429921 CAMSAP2Q08AD1 1489 aa14.54□□□□□ -0.08
RPE-206ENST00000429921 DDX10Q13206 875 aaKnown RBP14.53□□□□□ -0.08
RPE-206ENST00000429921 DENND4BO75064 1496 aaPredicted RBP14.53□□□□□ -0.08
RPE-206ENST00000429921 ACIN1Q9UKV3 1341 aaKnown RBP14.51□□□□□ -0.09
RPE-206ENST00000429921 SLC4A1APQ9BWU0 796 aaKnown RBP14.5□□□□□ -0.09
RPE-206ENST00000429921 DNMT1P26358 1616 aaKnown RBP14.49□□□□□ -0.09
RPE-206ENST00000429921 GCC2Q8IWJ2 1684 aa14.49□□□□□ -0.09
RPE-206ENST00000429921 MAPK8IP2Q13387 824 aaPredicted RBP14.48□□□□□ -0.09
RPE-206ENST00000429921 CDC42BPAQ5VT25 1732 aa14.46□□□□□ -0.09
RPE-206ENST00000429921 AKNAQ7Z591 1439 aa14.46□□□□□ -0.09
RPE-206ENST00000429921 ABCC10Q5T3U5 1492 aa14.45□□□□□ -0.1
RPE-206ENST00000429921 L3MBTL2Q969R5 705 aa14.45□□□□□ -0.1
RPE-206ENST00000429921 CENPBP07199 599 aaPredicted RBP14.44□□□□□ -0.1
RPE-206ENST00000429921 NCOA1Q15788 1441 aa14.43□□□□□ -0.1
RPE-206ENST00000429921 ITSN2Q9NZM3 1697 aa14.43□□□□□ -0.1
RPE-206ENST00000429921 ADCY10Q96PN6 1610 aa14.43□□□□□ -0.1
RPE-206ENST00000429921 TSPY4P0CV99 314 aa14.43□□□□□ -0.1
RPE-206ENST00000429921 TSPY10P0CW01 314 aa14.43□□□□□ -0.1
RPE-206ENST00000429921 ROCK1Q13464 1354 aa14.42□□□□□ -0.1
RPE-206ENST00000429921 GTF3C3Q9Y5Q9 886 aa14.42□□□□□ -0.1
RPE-206ENST00000429921 SHROOM2Q13796 1616 aa14.41□□□□□ -0.1
RPE-206ENST00000429921 ZNF326Q5BKZ1 582 aaKnown RBP14.41□□□□□ -0.1
RPE-206ENST00000429921 PKD2Q13563 968 aa14.41□□□□□ -0.1
RPE-206ENST00000429921 TIMELESSQ9UNS1 1208 aa14.41□□□□□ -0.1
RPE-206ENST00000429921 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.4□□□□□ -0.1
RPE-206ENST00000429921 ANKRD30AQ9BXX3 1397 aa14.39□□□□□ -0.11
RPE-206ENST00000429921 C9orf84Q5VXU9 1444 aa14.38□□□□□ -0.11
RPE-206ENST00000429921 KDM5BQ9UGL1 1544 aa14.38□□□□□ -0.11
RPE-206ENST00000429921 TTC37Q6PGP7 1564 aa14.38□□□□□ -0.11
RPE-206ENST00000429921 NBPF8Q3BBV2 869 aa14.38□□□□□ -0.11
RPE-206ENST00000429921 CDC42BPBQ9Y5S2 1711 aa14.37□□□□□ -0.11
RPE-206ENST00000429921 ANKRD30BQ9BXX2 1392 aa14.37□□□□□ -0.11
RPE-206ENST00000429921 ANKRD50Q9ULJ7 1429 aa14.36□□□□□ -0.11
RPE-206ENST00000429921 CLASP1Q7Z460 1538 aa14.36□□□□□ -0.11
RPE-206ENST00000429921 HSPA5P11021 654 aaKnown RBP14.36□□□□□ -0.11
RPE-206ENST00000429921 NUP155O75694 1391 aa14.36□□□□□ -0.11
RPE-206ENST00000429921 PZPP20742 1482 aa14.36□□□□□ -0.11
RPE-206ENST00000429921 ARHGAP5Q13017 1502 aa14.36□□□□□ -0.11
RPE-206ENST00000429921 ABCC2Q92887 1545 aa14.35□□□□□ -0.11
RPE-206ENST00000429921 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.35□□□□□ -0.11
RPE-206ENST00000429921 SAMD9LQ8IVG5 1584 aa14.35□□□□□ -0.11
RPE-206ENST00000429921 CROCC2H7BZ55 1655 aa14.34□□□□□ -0.11
RPE-206ENST00000429921 KIF15Q9NS87 1388 aa14.34□□□□□ -0.11
RPE-206ENST00000429921 ADGBQ8N7X0 1667 aa14.33□□□□□ -0.11
RPE-206ENST00000429921 CNGB1Q14028 1251 aaPredicted RBP14.33□□□□□ -0.12
RPE-206ENST00000429921 MBD5Q9P267 1494 aa14.33□□□□□ -0.12
RPE-206ENST00000429921 SYCP2Q9BX26 1530 aa14.32□□□□□ -0.12
RPE-206ENST00000429921 KDM2AQ9Y2K7 1162 aa14.32□□□□□ -0.12
RPE-206ENST00000429921 ZCCHC11Q5TAX3 1644 aaKnown RBP14.31□□□□□ -0.12
RPE-206ENST00000429921 C11orf95C9JLR9 678 aaPredicted RBP14.3□□□□□ -0.12
RPE-206ENST00000429921 ADGRL2O95490 1459 aa14.29□□□□□ -0.12
RPE-206ENST00000429921 PREX2Q70Z35 1606 aa14.29□□□□□ -0.12
RPE-206ENST00000429921 AFAP1Q8N556 730 aa14.29□□□□□ -0.12
RPE-206ENST00000429921 MYT1LQ9UL68 1186 aa14.29□□□□□ -0.12
RPE-206ENST00000429921 POLR3GLQ9BT43 218 aa14.29□□□□□ -0.12
RPE-206ENST00000429921 ARHGEF12Q9NZN5 1544 aa14.28□□□□□ -0.12
RPE-206ENST00000429921 RPRD2Q5VT52 1461 aaKnown RBP14.27□□□□□ -0.12
RPE-206ENST00000429921 CCDC141Q6ZP82 1450 aa14.27□□□□□ -0.13
RPE-206ENST00000429921 EIF4G2P78344 907 aaKnown RBP eCLIP14.26□□□□□ -0.13
RPE-206ENST00000429921 OSCARQ8IYS5 282 aa14.26□□□□□ -0.13
RPE-206ENST00000429921 KIAA1107Q9UPP5 1409 aa14.26□□□□□ -0.13
RPE-206ENST00000429921 WASHC2AQ641Q2 1341 aa14.26□□□□□ -0.13
RPE-206ENST00000429921 RGL3Q3MIN7 710 aa14.26□□□□□ -0.13
RPE-206ENST00000429921 PPP4R3CPQ6ZMV5 832 aa14.26□□□□□ -0.13
RPE-206ENST00000429921 EFCAB2Q5VUJ9 269 aa14.25□□□□□ -0.13
RPE-206ENST00000429921 MYO5CQ9NQX4 1742 aa14.24□□□□□ -0.13
RPE-206ENST00000429921 TEX14Q8IWB6 1497 aa14.23□□□□□ -0.13
RPE-206ENST00000429921 TRAPPC8Q9Y2L5 1435 aa14.23□□□□□ -0.13
RPE-206ENST00000429921 ANP32CO43423 234 aa14.23□□□□□ -0.13
RPE-206ENST00000429921 PLEKHH2Q8IVE3 1493 aa14.22□□□□□ -0.13
RPE-206ENST00000429921 SHANK2Q9UPX8 1470 aa14.22□□□□□ -0.13
RPE-206ENST00000429921 DCAF11Q8TEB1 546 aa14.21□□□□□ -0.13
RPE-206ENST00000429921 PLCH2O75038 1416 aa14.21□□□□□ -0.13
RPE-206ENST00000429921 ARHGEF5Q12774 1597 aa14.21□□□□□ -0.13
RPE-206ENST00000429921 UHRF1BP1LA0JNW5 1464 aa14.19□□□□□ -0.14
RPE-206ENST00000429921 RSPH4AQ5TD94 716 aa14.18□□□□□ -0.14
RPE-206ENST00000429921 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
RPE-206ENST00000429921 SPAG9O60271 1321 aaKnown RBP14.17□□□□□ -0.14
RPE-206ENST00000429921 NPM1P06748 294 aaKnown RBP eCLIP14.16□□□□□ -0.14
RPE-206ENST00000429921 FAM135AQ9P2D6 1515 aa14.16□□□□□ -0.14
RPE-206ENST00000429921 ASXL2Q76L83 1435 aa14.15□□□□□ -0.14
RPE-206ENST00000429921 WDR7Q9Y4E6 1490 aa14.15□□□□□ -0.14
RPE-206ENST00000429921 CCDC184Q52MB2 194 aa14.14□□□□□ -0.15
RPE-206ENST00000429921 CARD11Q9BXL7 1154 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms