RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 ARSIQ5FYB1 569 aa9.13□□□□□ -0.95
GYPB-201ENST00000429670 ZNF316A6NFI3 1004 aaPredicted RBP9.12□□□□□ -0.95
GYPB-201ENST00000429670 LSM11P83369 360 aaKnown RBP eCLIP9.09□□□□□ -0.95
GYPB-201ENST00000429670 RIOK3O14730 519 aaKnown RBP9.07□□□□□ -0.96
GYPB-201ENST00000429670 PBX2P40425 430 aa9.07□□□□□ -0.96
GYPB-201ENST00000429670 MS4A4AQ96JQ5 239 aa9.07□□□□□ -0.96
GYPB-201ENST00000429670 PHF8Q9UPP1 1060 aa9.06□□□□□ -0.96
GYPB-201ENST00000429670 VGFO15240 615 aaPredicted RBP9.05□□□□□ -0.96
GYPB-201ENST00000429670 NLRP6P59044 892 aa9.04□□□□□ -0.96
GYPB-201ENST00000429670 HCSTQ9UBK5 93 aa9.03□□□□□ -0.96
GYPB-201ENST00000429670 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.02□□□□□ -0.97
GYPB-201ENST00000429670 ZFP91Q96JP5 570 aaPredicted RBP9.02□□□□□ -0.97
GYPB-201ENST00000429670 PLA2G2EQ9NZK7 142 aa9.02□□□□□ -0.97
GYPB-201ENST00000429670 KHSRPQ92945 711 aaKnown RBP eCLIP9.01□□□□□ -0.973e-6■■■□□ 17.7
GYPB-201ENST00000429670 TAOK2Q9UL54 1235 aa9.01□□□□□ -0.97
GYPB-201ENST00000429670 NUDT7P0C024 238 aa8.96□□□□□ -0.98
GYPB-201ENST00000429670 SLC34A2O95436 690 aa8.95□□□□□ -0.98
GYPB-201ENST00000429670 PSDA5PKW4 1024 aaPredicted RBP8.94□□□□□ -0.98
GYPB-201ENST00000429670 LHX6Q9UPM6 363 aa8.94□□□□□ -0.98
GYPB-201ENST00000429670 KIF3CO14782 793 aa8.93□□□□□ -0.98
GYPB-201ENST00000429670 FBXO22Q8NEZ5 403 aa8.93□□□□□ -0.98
GYPB-201ENST00000429670 RNF25Q96BH1 459 aaPredicted RBP8.93□□□□□ -0.98
GYPB-201ENST00000429670 C2orf72A6NCS6 295 aa8.92□□□□□ -0.98
GYPB-201ENST00000429670 ARHGAP33O14559 1287 aa8.92□□□□□ -0.98
GYPB-201ENST00000429670 AXIN2Q9Y2T1 843 aa8.92□□□□□ -0.98
GYPB-201ENST00000429670 PCDHGA4Q9Y5G9 962 aa8.92□□□□□ -0.98
GYPB-201ENST00000429670 ADGRD1Q6QNK2 874 aa8.9□□□□□ -0.98
GYPB-201ENST00000429670 POTEEQ6S8J3 1075 aa8.9□□□□□ -0.98
GYPB-201ENST00000429670 TK2O00142 265 aa8.88□□□□□ -0.99
GYPB-201ENST00000429670 TMC2Q8TDI7 906 aa8.88□□□□□ -0.99
GYPB-201ENST00000429670 BCL11BQ9C0K0 894 aaPredicted RBP8.88□□□□□ -0.99
GYPB-201ENST00000429670 STAC3Q96MF2 364 aa8.87□□□□□ -0.99
GYPB-201ENST00000429670 STK24Q9Y6E0 443 aa8.87□□□□□ -0.99
GYPB-201ENST00000429670 MFRPQ9BY79 579 aa8.85□□□□□ -0.99
GYPB-201ENST00000429670 RGS20O76081 388 aa8.82□□□□□ -1
GYPB-201ENST00000429670 HRO43593 1189 aa8.81□□□□□ -1
GYPB-201ENST00000429670 STK25O00506 426 aa8.79□□□□□ -1
GYPB-201ENST00000429670 PTCD2Q8WV60 388 aaKnown RBP8.78□□□□□ -1
GYPB-201ENST00000429670 KCTD12Q96CX2 325 aaKnown RBP8.78□□□□□ -1
GYPB-201ENST00000429670 KCNH8Q96L42 1107 aa8.78□□□□□ -1
GYPB-201ENST00000429670 TBC1D12O60347 775 aa8.77□□□□□ -1.01
GYPB-201ENST00000429670 PPP4R3BQ5MIZ7 849 aa8.77□□□□□ -1.01
GYPB-201ENST00000429670 KDM4FA0A1W2PPD8 638 aa8.76□□□□□ -1.01
GYPB-201ENST00000429670 DMRTA1Q5VZB9 504 aa8.76□□□□□ -1.01
GYPB-201ENST00000429670 PSEN2P49810 448 aa8.75□□□□□ -1.01
GYPB-201ENST00000429670 IFFO2Q5TF58 517 aa8.74□□□□□ -1.01
GYPB-201ENST00000429670 IRX2Q9BZI1 471 aaPredicted RBP8.71□□□□□ -1.02
GYPB-201ENST00000429670 PTPN5P54829 565 aa8.69□□□□□ -1.02
GYPB-201ENST00000429670 FOXK1P85037 733 aa8.69□□□□□ -1.02
GYPB-201ENST00000429670 PLPP6Q8IY26 295 aa8.68□□□□□ -1.02
GYPB-201ENST00000429670 ECM2O94769 699 aaPredicted RBP8.67□□□□□ -1.02
GYPB-201ENST00000429670 KCNK17Q96T54 332 aa8.67□□□□□ -1.02
GYPB-201ENST00000429670 SLC4A5Q9BY07 1137 aa8.67□□□□□ -1.02
GYPB-201ENST00000429670 VPS9D1Q9Y2B5 631 aa8.67□□□□□ -1.02
GYPB-201ENST00000429670 GPHNQ9NQX3 736 aaPredicted RBP8.66□□□□□ -1.02
GYPB-201ENST00000429670 PPP1R37O75864 691 aa8.65□□□□□ -1.02
GYPB-201ENST00000429670 GOLGA8CPA6NN73 597 aa8.64□□□□□ -1.03
GYPB-201ENST00000429670 A0A0G2JS52 829 aa8.62□□□□□ -1.03
GYPB-201ENST00000429670 THSD4Q6ZMP0 1018 aa8.61□□□□□ -1.03
GYPB-201ENST00000429670 BHMG1C9JSJ3 638 aaPredicted RBP8.59□□□□□ -1.03
GYPB-201ENST00000429670 DSG2Q14126 1118 aa8.59□□□□□ -1.03
GYPB-201ENST00000429670 BCL2L12Q9HB09 334 aa8.59□□□□□ -1.03
GYPB-201ENST00000429670 PTPREP23469 700 aa8.58□□□□□ -1.04
GYPB-201ENST00000429670 MRPL50Q8N5N7 158 aaKnown RBP8.58□□□□□ -1.04
GYPB-201ENST00000429670 ZNF454Q8N9F8 522 aa8.58□□□□□ -1.04
GYPB-201ENST00000429670 WNT2BQ93097 391 aa8.58□□□□□ -1.04
GYPB-201ENST00000429670 OXER1Q8TDS5 423 aa8.56□□□□□ -1.04
GYPB-201ENST00000429670 RGL2O15211 777 aa8.55□□□□□ -1.04
GYPB-201ENST00000429670 NBPF3Q9H094 633 aa8.54□□□□□ -1.04
GYPB-201ENST00000429670 ZBED2Q9BTP6 218 aa8.53□□□□□ -1.04
GYPB-201ENST00000429670 FOSBP53539 338 aa8.52□□□□□ -1.05
GYPB-201ENST00000429670 UPF1Q92900 1129 aaKnown RBP eCLIP8.5□□□□□ -1.05
GYPB-201ENST00000429670 PKD2Q13563 968 aa8.49□□□□□ -1.05
GYPB-201ENST00000429670 Q6ZNB5 142 aa8.49□□□□□ -1.05
GYPB-201ENST00000429670 ANO8Q9HCE9 1232 aaPredicted RBP8.49□□□□□ -1.05
GYPB-201ENST00000429670 ZDHHC16Q969W1 377 aa8.47□□□□□ -1.05
GYPB-201ENST00000429670 JPH4Q96JJ6 628 aa8.47□□□□□ -1.05
GYPB-201ENST00000429670 ITGBL1O95965 494 aaPredicted RBP8.46□□□□□ -1.06
GYPB-201ENST00000429670 NYAP1Q6ZVC0 841 aa8.46□□□□□ -1.06
GYPB-201ENST00000429670 ANKK1Q8NFD2 765 aa8.46□□□□□ -1.06
GYPB-201ENST00000429670 LAPTM4AQ15012 233 aa8.45□□□□□ -1.06
GYPB-201ENST00000429670 RYDENQ9NUL5 291 aaKnown RBP8.45□□□□□ -1.06
GYPB-201ENST00000429670 RABGEF1Q9UJ41 708 aa8.44□□□□□ -1.06
GYPB-201ENST00000429670 PDE4AP27815 886 aa8.43□□□□□ -1.06
GYPB-201ENST00000429670 PPP1R15BQ5SWA1 713 aa8.43□□□□□ -1.06
GYPB-201ENST00000429670 HS6ST3Q8IZP7 471 aa8.43□□□□□ -1.06
GYPB-201ENST00000429670 EVI5O60447 810 aa8.42□□□□□ -1.06
GYPB-201ENST00000429670 LAPTM4BQ86VI4 370 aa8.42□□□□□ -1.06
GYPB-201ENST00000429670 ADAM33Q9BZ11 813 aa8.42□□□□□ -1.06
GYPB-201ENST00000429670 CRISPLD2Q9H0B8 497 aa8.42□□□□□ -1.06
GYPB-201ENST00000429670 KCNC4Q03721 635 aa8.41□□□□□ -1.06
GYPB-201ENST00000429670 PPP1R3GB7ZBB8 358 aa8.39□□□□□ -1.07
GYPB-201ENST00000429670 SOWAHBA6NEL2 793 aa8.38□□□□□ -1.07
GYPB-201ENST00000429670 MAP3K9P80192 1104 aa8.38□□□□□ -1.07
GYPB-201ENST00000429670 ONECUT3O60422 494 aaPredicted RBP8.37□□□□□ -1.07
GYPB-201ENST00000429670 BCAMP50895 628 aa8.35□□□□□ -1.07
GYPB-201ENST00000429670 TRAF7Q6Q0C0 670 aa8.35□□□□□ -1.07
GYPB-201ENST00000429670 FBXW7Q969H0 707 aa8.34□□□□□ -1.07
GYPB-201ENST00000429670 ZFRQ96KR1 1074 aaKnown RBP8.34□□□□□ -1.07
GYPB-201ENST00000429670 GFRA3O60609 400 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms