RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 FBXO41Q8TF61 875 aa21.59■■□□□ 1.05
HLA-F-219ENST00000429294 RIMS1Q86UR5 1692 aaKnown RBP21.59■■□□□ 1.05
HLA-F-219ENST00000429294 YEATS2Q9ULM3 1422 aa21.57■■□□□ 1.04
HLA-F-219ENST00000429294 MLECQ14165 292 aa21.57■■□□□ 1.04
HLA-F-219ENST00000429294 LMTK3Q96Q04 1460 aa21.55■■□□□ 1.04
HLA-F-219ENST00000429294 ARHGAP35Q9NRY4 1499 aa21.55■■□□□ 1.04
HLA-F-219ENST00000429294 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
HLA-F-219ENST00000429294 CLIP1P30622 1438 aa21.53■■□□□ 1.04
HLA-F-219ENST00000429294 MYO5CQ9NQX4 1742 aa21.52■■□□□ 1.03
HLA-F-219ENST00000429294 TROQ12816 1431 aaPredicted RBP21.5■■□□□ 1.03
HLA-F-219ENST00000429294 MYT1LQ9UL68 1186 aa21.5■■□□□ 1.03
HLA-F-219ENST00000429294 KIF14Q15058 1648 aa21.5■■□□□ 1.03
HLA-F-219ENST00000429294 ATP10AO60312 1499 aa21.5■■□□□ 1.03
HLA-F-219ENST00000429294 C9orf84Q5VXU9 1444 aa21.48■■□□□ 1.03
HLA-F-219ENST00000429294 HSPA2P54652 639 aa21.48■■□□□ 1.03
HLA-F-219ENST00000429294 ARHGAP5Q13017 1502 aa21.47■■□□□ 1.03
HLA-F-219ENST00000429294 ZNF518AQ6AHZ1 1483 aa21.46■■□□□ 1.03
HLA-F-219ENST00000429294 FER1L4A9Z1Z3 1794 aa21.45■■□□□ 1.02
HLA-F-219ENST00000429294 SIGLEC1Q9BZZ2 1709 aa21.43■■□□□ 1.02
HLA-F-219ENST00000429294 AFAP1Q8N556 730 aa21.43■■□□□ 1.02
HLA-F-219ENST00000429294 ARHGEF12Q9NZN5 1544 aa21.39■■□□□ 1.02
HLA-F-219ENST00000429294 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.01
HLA-F-219ENST00000429294 ESF1Q9H501 851 aaKnown RBP21.37■■□□□ 1.01
HLA-F-219ENST00000429294 CASKIN1Q8WXD9 1431 aa21.37■■□□□ 1.01
HLA-F-219ENST00000429294 KDM5CP41229 1560 aa21.36■■□□□ 1.01
HLA-F-219ENST00000429294 CEBPAP49715 358 aaPredicted RBP21.35■■□□□ 1.01
HLA-F-219ENST00000429294 MLH3Q9UHC1 1453 aa21.32■■□□□ 1
HLA-F-219ENST00000429294 LRRIQ1Q96JM4 1722 aa21.32■■□□□ 1
HLA-F-219ENST00000429294 DMRT2Q9Y5R5 561 aa21.32■■□□□ 1
HLA-F-219ENST00000429294 CDC42BPBQ9Y5S2 1711 aa21.32■■□□□ 1
HLA-F-219ENST00000429294 SETD1BQ9UPS6 1966 aaKnown RBP21.31■■□□□ 1
HLA-F-219ENST00000429294 CERKQ8TCT0 537 aa21.31■■□□□ 1
HLA-F-219ENST00000429294 PREX1Q8TCU6 1659 aa21.31■■□□□ 1
HLA-F-219ENST00000429294 DIP2CQ9Y2E4 1556 aa21.3■■□□□ 1
HLA-F-219ENST00000429294 PREX2Q70Z35 1606 aa21.29■■□□□ 1
HLA-F-219ENST00000429294 REREQ9P2R6 1566 aa21.29■■□□□ 1
HLA-F-219ENST00000429294 UHRF1BP1Q6BDS2 1440 aa21.29■■□□□ 1
HLA-F-219ENST00000429294 ABCC1P33527 1531 aa21.28■■□□□ 1
HLA-F-219ENST00000429294 TRAPPC8Q9Y2L5 1435 aa21.28■■□□□ 1
HLA-F-219ENST00000429294 FYCO1Q9BQS8 1478 aa21.27■■□□□ 1
HLA-F-219ENST00000429294 ZNF777Q9ULD5 760 aaPredicted RBP21.27■■□□□ 1
HLA-F-219ENST00000429294 ABCA6Q8N139 1617 aa21.25■□□□□ 0.99
HLA-F-219ENST00000429294 AGLP35573 1532 aa21.24■□□□□ 0.99
HLA-F-219ENST00000429294 ITSN2Q9NZM3 1697 aa21.23■□□□□ 0.99
HLA-F-219ENST00000429294 CDC42BPAQ5VT25 1732 aa21.21■□□□□ 0.99
HLA-F-219ENST00000429294 CNTLNQ9NXG0 1405 aa21.21■□□□□ 0.99
HLA-F-219ENST00000429294 SPAG9O60271 1321 aaKnown RBP21.2■□□□□ 0.98
HLA-F-219ENST00000429294 CFDP1Q9UEE9 299 aaPredicted RBP21.18■□□□□ 0.98
HLA-F-219ENST00000429294 KIDINS220Q9ULH0 1771 aa21.18■□□□□ 0.98
HLA-F-219ENST00000429294 C3P01024 1663 aa21.16■□□□□ 0.98
HLA-F-219ENST00000429294 GPATCH8Q9UKJ3 1502 aaKnown RBP21.16■□□□□ 0.98
HLA-F-219ENST00000429294 HNRNPMP52272 730 aaKnown RBP eCLIP21.16■□□□□ 0.98
HLA-F-219ENST00000429294 PLEKHH2Q8IVE3 1493 aa21.15■□□□□ 0.98
HLA-F-219ENST00000429294 CCNB3Q8WWL7 1395 aa21.15■□□□□ 0.98
HLA-F-219ENST00000429294 SAMD9LQ8IVG5 1584 aa21.14■□□□□ 0.98
HLA-F-219ENST00000429294 MTUS2Q5JR59 1369 aa21.14■□□□□ 0.98
HLA-F-219ENST00000429294 SYCP2Q9BX26 1530 aa21.14■□□□□ 0.97
HLA-F-219ENST00000429294 STRCQ7RTU9 1775 aa21.13■□□□□ 0.97
HLA-F-219ENST00000429294 KIAA1107Q9UPP5 1409 aa21.12■□□□□ 0.97
HLA-F-219ENST00000429294 PTPRTO14522 1441 aa21.12■□□□□ 0.97
HLA-F-219ENST00000429294 ZMYM3Q14202 1370 aa21.09■□□□□ 0.97
HLA-F-219ENST00000429294 NPATQ14207 1427 aa21.08■□□□□ 0.97
HLA-F-219ENST00000429294 ATP7AQ04656 1500 aa21.08■□□□□ 0.96
HLA-F-219ENST00000429294 SUPT6HQ7KZ85 1726 aaKnown RBP21.06■□□□□ 0.96
HLA-F-219ENST00000429294 GGT6Q6P531 493 aa21.05■□□□□ 0.96
HLA-F-219ENST00000429294 A2MP01023 1474 aa21.05■□□□□ 0.96
HLA-F-219ENST00000429294 MROH2AA6NES4 1674 aa21.05■□□□□ 0.96
HLA-F-219ENST00000429294 NCOA1Q15788 1441 aa21.04■□□□□ 0.96
HLA-F-219ENST00000429294 PPP6R1Q9UPN7 881 aa21.03■□□□□ 0.96
HLA-F-219ENST00000429294 INO80Q9ULG1 1556 aaPredicted RBP21.02■□□□□ 0.95
HLA-F-219ENST00000429294 PLXNC1O60486 1568 aa20.99■□□□□ 0.95
HLA-F-219ENST00000429294 CAMSAP1Q5T5Y3 1602 aa20.99■□□□□ 0.95
HLA-F-219ENST00000429294 EHBP1L1Q8N3D4 1523 aa20.99■□□□□ 0.95
HLA-F-219ENST00000429294 ZNF644Q9H582 1327 aaPredicted RBP20.98■□□□□ 0.95
HLA-F-219ENST00000429294 CLTCQ00610 1675 aaKnown RBP20.97■□□□□ 0.95
HLA-F-219ENST00000429294 PKD2Q13563 968 aa20.96■□□□□ 0.95
HLA-F-219ENST00000429294 ADGBQ8N7X0 1667 aa20.96■□□□□ 0.95
HLA-F-219ENST00000429294 CEP162Q5TB80 1403 aa20.95■□□□□ 0.95
HLA-F-219ENST00000429294 TIAM1Q13009 1591 aa20.95■□□□□ 0.94
HLA-F-219ENST00000429294 RTEL1-TNFRSF6BF6WH68 1400 aa20.95■□□□□ 0.94
HLA-F-219ENST00000429294 PTPRKQ15262 1439 aa20.95■□□□□ 0.94
HLA-F-219ENST00000429294 NCKAP5LQ9HCH0 1330 aa20.94■□□□□ 0.94
HLA-F-219ENST00000429294 DISP3Q9P2K9 1392 aa20.94■□□□□ 0.94
HLA-F-219ENST00000429294 IQSEC2Q5JU85 1478 aa20.94■□□□□ 0.94
HLA-F-219ENST00000429294 RSPH4AQ5TD94 716 aa20.93■□□□□ 0.94
HLA-F-219ENST00000429294 MBD5Q9P267 1494 aa20.93■□□□□ 0.94
HLA-F-219ENST00000429294 LTBP4Q8N2S1 1624 aa20.93■□□□□ 0.94
HLA-F-219ENST00000429294 PLA2R1Q13018 1463 aa20.91■□□□□ 0.94
HLA-F-219ENST00000429294 DHX29Q7Z478 1369 aaKnown RBP20.91■□□□□ 0.94
HLA-F-219ENST00000429294 MYO3AQ8NEV4 1616 aa20.89■□□□□ 0.94
HLA-F-219ENST00000429294 CEP170BQ9Y4F5 1589 aaPredicted RBP20.89■□□□□ 0.94
HLA-F-219ENST00000429294 KIF3BO15066 747 aa20.89■□□□□ 0.93
HLA-F-219ENST00000429294 ZNF142P52746 1687 aaPredicted RBP20.89■□□□□ 0.93
HLA-F-219ENST00000429294 CCDC141Q6ZP82 1450 aa20.88■□□□□ 0.93
HLA-F-219ENST00000429294 ZNF335Q9H4Z2 1342 aaPredicted RBP20.86■□□□□ 0.93
HLA-F-219ENST00000429294 TSPY4P0CV99 314 aa20.86■□□□□ 0.93
HLA-F-219ENST00000429294 TSPY10P0CW01 314 aa20.86■□□□□ 0.93
HLA-F-219ENST00000429294 NCOA2Q15596 1464 aa20.86■□□□□ 0.93
HLA-F-219ENST00000429294 WASHC2CQ9Y4E1 1318 aa20.84■□□□□ 0.93
HLA-F-219ENST00000429294 A2ML1A8K2U0 1454 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms