RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 ZNF710Q8N1W2 664 aa12.39□□□□□ -0.43
LINC00348-201ENST00000428761 HOXB3P14651 431 aaPredicted RBP12.38□□□□□ -0.43
LINC00348-201ENST00000428761 PHF8Q9UPP1 1060 aa12.36□□□□□ -0.43
LINC00348-201ENST00000428761 DNAJC5Q9H3Z4 198 aa12.35□□□□□ -0.43
LINC00348-201ENST00000428761 DOK7Q18PE1 504 aa12.34□□□□□ -0.43
LINC00348-201ENST00000428761 MFRPQ9BY79 579 aa12.34□□□□□ -0.43
LINC00348-201ENST00000428761 MICALL2Q8IY33 904 aa12.33□□□□□ -0.44
LINC00348-201ENST00000428761 NKX1-1Q15270 411 aaPredicted RBP12.32□□□□□ -0.44
LINC00348-201ENST00000428761 FBXO22Q8NEZ5 403 aa12.32□□□□□ -0.44
LINC00348-201ENST00000428761 MS4A4AQ96JQ5 239 aa12.32□□□□□ -0.44
LINC00348-201ENST00000428761 KRTAP3-3Q9BYR6 98 aa12.32□□□□□ -0.44
LINC00348-201ENST00000428761 KRTAP3-2Q9BYR7 98 aa12.32□□□□□ -0.44
LINC00348-201ENST00000428761 HOXB1P14653 301 aaPredicted RBP12.31□□□□□ -0.44
LINC00348-201ENST00000428761 NLRP6P59044 892 aa12.3□□□□□ -0.44
LINC00348-201ENST00000428761 TMEM92Q6UXU6 159 aa12.29□□□□□ -0.44
LINC00348-201ENST00000428761 ERBB3P21860 1342 aa12.28□□□□□ -0.44
LINC00348-201ENST00000428761 RIMBP2O15034 1052 aa12.27□□□□□ -0.45
LINC00348-201ENST00000428761 PLCB2Q00722 1185 aa12.25□□□□□ -0.45
LINC00348-201ENST00000428761 BBXQ8WY36 941 aaPredicted RBP12.2□□□□□ -0.46
LINC00348-201ENST00000428761 PPP1R37O75864 691 aa12.19□□□□□ -0.46
LINC00348-201ENST00000428761 VARS2Q5ST30 1063 aaKnown RBP12.19□□□□□ -0.46
LINC00348-201ENST00000428761 GTPBP6O43824 516 aaPredicted RBP12.18□□□□□ -0.46
LINC00348-201ENST00000428761 ZSWIM6Q9HCJ5 1215 aa12.17□□□□□ -0.46
LINC00348-201ENST00000428761 GPR153Q6NV75 609 aa12.14□□□□□ -0.47
LINC00348-201ENST00000428761 RYDENQ9NUL5 291 aaKnown RBP12.12□□□□□ -0.47
LINC00348-201ENST00000428761 ARSIQ5FYB1 569 aa12.11□□□□□ -0.47
LINC00348-201ENST00000428761 ZNF687Q8N1G0 1237 aa12.08□□□□□ -0.48
LINC00348-201ENST00000428761 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.07□□□□□ -0.48
LINC00348-201ENST00000428761 KHSRPQ92945 711 aaKnown RBP eCLIP12.06□□□□□ -0.48
LINC00348-201ENST00000428761 SPRYD3Q8NCJ5 442 aa12.04□□□□□ -0.48
LINC00348-201ENST00000428761 C2orf72A6NCS6 295 aa12.02□□□□□ -0.49
LINC00348-201ENST00000428761 RNF166Q96A37 237 aaPredicted RBP12.02□□□□□ -0.49
LINC00348-201ENST00000428761 ZNF316A6NFI3 1004 aaPredicted RBP12.01□□□□□ -0.49
LINC00348-201ENST00000428761 HAP1P54257 671 aaPredicted RBP12.01□□□□□ -0.49
LINC00348-201ENST00000428761 PAXIP1Q6ZW49 1069 aaPredicted RBP12.01□□□□□ -0.49
LINC00348-201ENST00000428761 KIF3CO14782 793 aa11.99□□□□□ -0.49
LINC00348-201ENST00000428761 CFAP44Q96MT7 982 aa11.99□□□□□ -0.49
LINC00348-201ENST00000428761 MYT1LQ9UL68 1186 aa11.99□□□□□ -0.49
LINC00348-201ENST00000428761 ANKRD13DQ6ZTN6 518 aa11.98□□□□□ -0.49
LINC00348-201ENST00000428761 NUDT7P0C024 238 aa11.95□□□□□ -0.5
LINC00348-201ENST00000428761 TMC2Q8TDI7 906 aa11.95□□□□□ -0.5
LINC00348-201ENST00000428761 VSIG10Q8N0Z9 540 aa11.94□□□□□ -0.5
LINC00348-201ENST00000428761 BCANQ96GW7 911 aa11.93□□□□□ -0.5
LINC00348-201ENST00000428761 CADPS2Q86UW7 1296 aa11.91□□□□□ -0.5
LINC00348-201ENST00000428761 PCDHGA4Q9Y5G9 962 aa11.91□□□□□ -0.5
LINC00348-201ENST00000428761 PTGER2P43116 358 aa11.89□□□□□ -0.51
LINC00348-201ENST00000428761 LHX6Q9UPM6 363 aa11.89□□□□□ -0.51
LINC00348-201ENST00000428761 SLC34A2O95436 690 aa11.88□□□□□ -0.51
LINC00348-201ENST00000428761 LSM11P83369 360 aaKnown RBP eCLIP11.88□□□□□ -0.51
LINC00348-201ENST00000428761 GPHNQ9NQX3 736 aaPredicted RBP11.88□□□□□ -0.51
LINC00348-201ENST00000428761 CRISPLD2Q9H0B8 497 aa11.87□□□□□ -0.51
LINC00348-201ENST00000428761 NCKAP5LQ9HCH0 1330 aa11.86□□□□□ -0.51
LINC00348-201ENST00000428761 AXIN2Q9Y2T1 843 aa11.85□□□□□ -0.51
LINC00348-201ENST00000428761 PDE4AP27815 886 aa11.83□□□□□ -0.52
LINC00348-201ENST00000428761 PBX2P40425 430 aa11.82□□□□□ -0.52
LINC00348-201ENST00000428761 FOXK1P85037 733 aa11.82□□□□□ -0.52
LINC00348-201ENST00000428761 DSG2Q14126 1118 aa11.81□□□□□ -0.52
LINC00348-201ENST00000428761 TSHZ2Q9NRE2 1034 aa11.81□□□□□ -0.52
LINC00348-201ENST00000428761 POTEEQ6S8J3 1075 aa11.8□□□□□ -0.52
LINC00348-201ENST00000428761 LARP6Q9BRS8 491 aaKnown RBP11.79□□□□□ -0.52
LINC00348-201ENST00000428761 PLPP6Q8IY26 295 aa11.78□□□□□ -0.52
LINC00348-201ENST00000428761 PRKCSHP14314 528 aaPredicted RBP11.76□□□□□ -0.53
LINC00348-201ENST00000428761 MFSD10Q14728 455 aa11.76□□□□□ -0.53
LINC00348-201ENST00000428761 PPP1R15BQ5SWA1 713 aa11.74□□□□□ -0.53
LINC00348-201ENST00000428761 PTCD2Q8WV60 388 aaKnown RBP11.74□□□□□ -0.53
LINC00348-201ENST00000428761 KDM2AQ9Y2K7 1162 aa11.74□□□□□ -0.53
LINC00348-201ENST00000428761 PSDA5PKW4 1024 aaPredicted RBP11.73□□□□□ -0.53
LINC00348-201ENST00000428761 DDX27Q96GQ7 796 aaKnown RBP11.73□□□□□ -0.53
LINC00348-201ENST00000428761 ARHGAP33O14559 1287 aa11.72□□□□□ -0.53
LINC00348-201ENST00000428761 KDM4FA0A1W2PPD8 638 aa11.69□□□□□ -0.54
LINC00348-201ENST00000428761 ADGRD1Q6QNK2 874 aa11.69□□□□□ -0.54
LINC00348-201ENST00000428761 TBC1D12O60347 775 aa11.68□□□□□ -0.54
LINC00348-201ENST00000428761 PSEN2P49810 448 aa11.66□□□□□ -0.54
LINC00348-201ENST00000428761 DMRTA1Q5VZB9 504 aa11.65□□□□□ -0.54
LINC00348-201ENST00000428761 PPP4R3BQ5MIZ7 849 aa11.64□□□□□ -0.55
LINC00348-201ENST00000428761 OXER1Q8TDS5 423 aa11.64□□□□□ -0.55
LINC00348-201ENST00000428761 CAMK2BQ13554 666 aa11.63□□□□□ -0.55
LINC00348-201ENST00000428761 EMILIN3Q9NT22 766 aa11.63□□□□□ -0.55
LINC00348-201ENST00000428761 HCSTQ9UBK5 93 aa11.63□□□□□ -0.55
LINC00348-201ENST00000428761 UPF1Q92900 1129 aaKnown RBP eCLIP11.61□□□□□ -0.55
LINC00348-201ENST00000428761 TK2O00142 265 aa11.6□□□□□ -0.55
LINC00348-201ENST00000428761 WDR70Q9NW82 654 aa11.6□□□□□ -0.55
LINC00348-201ENST00000428761 PLA2G2EQ9NZK7 142 aa11.59□□□□□ -0.55
LINC00348-201ENST00000428761 STAC3Q96MF2 364 aa11.58□□□□□ -0.56
LINC00348-201ENST00000428761 HRO43593 1189 aa11.57□□□□□ -0.56
LINC00348-201ENST00000428761 TPRNQ4KMQ1 711 aa11.57□□□□□ -0.56
LINC00348-201ENST00000428761 KCNK17Q96T54 332 aa11.57□□□□□ -0.56
LINC00348-201ENST00000428761 KCNH8Q96L42 1107 aa11.56□□□□□ -0.56
LINC00348-201ENST00000428761 E2F4Q16254 413 aa11.55□□□□□ -0.56
LINC00348-201ENST00000428761 KCTD12Q96CX2 325 aaKnown RBP11.54□□□□□ -0.56
LINC00348-201ENST00000428761 MAP3K9P80192 1104 aa11.53□□□□□ -0.56
LINC00348-201ENST00000428761 ZNF454Q8N9F8 522 aa11.53□□□□□ -0.56
LINC00348-201ENST00000428761 ANO8Q9HCE9 1232 aaPredicted RBP11.5□□□□□ -0.57
LINC00348-201ENST00000428761 DPYSL4O14531 572 aa11.49□□□□□ -0.57
LINC00348-201ENST00000428761 EVI5O60447 810 aa11.49□□□□□ -0.57
LINC00348-201ENST00000428761 VPS9D1Q9Y2B5 631 aa11.48□□□□□ -0.57
LINC00348-201ENST00000428761 ARIH1Q9Y4X5 557 aaPredicted RBP11.47□□□□□ -0.57
LINC00348-201ENST00000428761 BCL2L12Q9HB09 334 aa11.45□□□□□ -0.58
LINC00348-201ENST00000428761 FOSBP53539 338 aa11.44□□□□□ -0.58
LINC00348-201ENST00000428761 KCNV2Q8TDN2 545 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms