RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 KIF14Q15058 1648 aa28.59■■■□□ 2.17
DDR1-235ENST00000428153 EFCAB2Q5VUJ9 269 aa28.59■■■□□ 2.17
DDR1-235ENST00000428153 CLIP1P30622 1438 aa28.57■■■□□ 2.16
DDR1-235ENST00000428153 YEATS2Q9ULM3 1422 aa28.55■■■□□ 2.16
DDR1-235ENST00000428153 ILDR1Q86SU0 546 aaPredicted RBP28.54■■■□□ 2.16
DDR1-235ENST00000428153 CASKIN1Q8WXD9 1431 aa28.52■■■□□ 2.16
DDR1-235ENST00000428153 CCDC18Q5T9S5 1454 aa28.51■■■□□ 2.15
DDR1-235ENST00000428153 LRRIQ1Q96JM4 1722 aa28.5■■■□□ 2.15
DDR1-235ENST00000428153 PCF11O94913 1555 aaKnown RBP28.48■■■□□ 2.15
DDR1-235ENST00000428153 RIMS1Q86UR5 1692 aaKnown RBP28.48■■■□□ 2.15
DDR1-235ENST00000428153 ZNF518AQ6AHZ1 1483 aa28.47■■■□□ 2.15
DDR1-235ENST00000428153 ATP10AO60312 1499 aa28.46■■■□□ 2.15
DDR1-235ENST00000428153 SIGLEC1Q9BZZ2 1709 aa28.46■■■□□ 2.15
DDR1-235ENST00000428153 ARHGAP5Q13017 1502 aa28.45■■■□□ 2.15
DDR1-235ENST00000428153 C9orf84Q5VXU9 1444 aa28.44■■■□□ 2.14
DDR1-235ENST00000428153 LMTK3Q96Q04 1460 aa28.44■■■□□ 2.14
DDR1-235ENST00000428153 KDM5CP41229 1560 aa28.43■■■□□ 2.14
DDR1-235ENST00000428153 FYCO1Q9BQS8 1478 aa28.4■■■□□ 2.14
DDR1-235ENST00000428153 ARHGEF12Q9NZN5 1544 aa28.38■■■□□ 2.13
DDR1-235ENST00000428153 CDC42BPBQ9Y5S2 1711 aa28.38■■■□□ 2.13
DDR1-235ENST00000428153 PREX2Q70Z35 1606 aa28.37■■■□□ 2.13
DDR1-235ENST00000428153 FER1L4A9Z1Z3 1794 aa28.37■■■□□ 2.13
DDR1-235ENST00000428153 REREQ9P2R6 1566 aa28.34■■■□□ 2.13
DDR1-235ENST00000428153 MLH3Q9UHC1 1453 aa28.34■■■□□ 2.13
DDR1-235ENST00000428153 AFAP1Q8N556 730 aa28.33■■■□□ 2.13
DDR1-235ENST00000428153 MLECQ14165 292 aa28.31■■■□□ 2.12
DDR1-235ENST00000428153 ABCC1P33527 1531 aa28.31■■■□□ 2.12
DDR1-235ENST00000428153 DIP2CQ9Y2E4 1556 aa28.28■■■□□ 2.12
DDR1-235ENST00000428153 CDC42BPAQ5VT25 1732 aa28.26■■■□□ 2.11
DDR1-235ENST00000428153 ITSN2Q9NZM3 1697 aa28.24■■■□□ 2.11
DDR1-235ENST00000428153 AGLP35573 1532 aa28.23■■■□□ 2.11
DDR1-235ENST00000428153 TRAPPC8Q9Y2L5 1435 aa28.23■■■□□ 2.11
DDR1-235ENST00000428153 FBXO41Q8TF61 875 aa28.22■■■□□ 2.11
DDR1-235ENST00000428153 ABCA6Q8N139 1617 aa28.21■■■□□ 2.11
DDR1-235ENST00000428153 MYT1LQ9UL68 1186 aa28.21■■■□□ 2.11
DDR1-235ENST00000428153 GPATCH8Q9UKJ3 1502 aaKnown RBP28.18■■■□□ 2.1
DDR1-235ENST00000428153 HSPA2P54652 639 aa28.17■■■□□ 2.1
DDR1-235ENST00000428153 PLPPR3Q6T4P5 718 aa28.17■■■□□ 2.1
DDR1-235ENST00000428153 PREX1Q8TCU6 1659 aa28.16■■■□□ 2.1
DDR1-235ENST00000428153 KIDINS220Q9ULH0 1771 aa28.16■■■□□ 2.1
DDR1-235ENST00000428153 SETD1BQ9UPS6 1966 aaKnown RBP28.15■■■□□ 2.1
DDR1-235ENST00000428153 SAMD9LQ8IVG5 1584 aa28.13■■■□□ 2.09
DDR1-235ENST00000428153 KIAA1107Q9UPP5 1409 aa28.13■■■□□ 2.09
DDR1-235ENST00000428153 PLEKHH2Q8IVE3 1493 aa28.13■■■□□ 2.09
DDR1-235ENST00000428153 MTUS2Q5JR59 1369 aa28.09■■■□□ 2.09
DDR1-235ENST00000428153 SYCP2Q9BX26 1530 aa28.08■■■□□ 2.09
DDR1-235ENST00000428153 CEBPAP49715 358 aaPredicted RBP28.08■■■□□ 2.09
DDR1-235ENST00000428153 CNTLNQ9NXG0 1405 aa28.08■■■□□ 2.09
DDR1-235ENST00000428153 CCNB3Q8WWL7 1395 aa28.07■■■□□ 2.08
DDR1-235ENST00000428153 UHRF1BP1Q6BDS2 1440 aa28.07■■■□□ 2.08
DDR1-235ENST00000428153 ESF1Q9H501 851 aaKnown RBP28.06■■■□□ 2.08
DDR1-235ENST00000428153 CFDP1Q9UEE9 299 aaPredicted RBP28.06■■■□□ 2.08
DDR1-235ENST00000428153 ZNF777Q9ULD5 760 aaPredicted RBP28.06■■■□□ 2.08
DDR1-235ENST00000428153 SPAG9O60271 1321 aaKnown RBP28.05■■■□□ 2.08
DDR1-235ENST00000428153 C3P01024 1663 aa28.03■■■□□ 2.08
DDR1-235ENST00000428153 EHBP1L1Q8N3D4 1523 aa28.02■■■□□ 2.08
DDR1-235ENST00000428153 HNRNPMP52272 730 aaKnown RBP eCLIP28.01■■■□□ 2.07
DDR1-235ENST00000428153 DMRT2Q9Y5R5 561 aa28■■■□□ 2.07
DDR1-235ENST00000428153 ATP7AQ04656 1500 aa28■■■□□ 2.07
DDR1-235ENST00000428153 CEP162Q5TB80 1403 aa28■■■□□ 2.07
DDR1-235ENST00000428153 INO80Q9ULG1 1556 aaPredicted RBP27.99■■■□□ 2.07
DDR1-235ENST00000428153 PLXNC1O60486 1568 aa27.97■■■□□ 2.07
DDR1-235ENST00000428153 MROH2AA6NES4 1674 aa27.97■■■□□ 2.07
DDR1-235ENST00000428153 TIAM1Q13009 1591 aa27.96■■■□□ 2.07
DDR1-235ENST00000428153 NPATQ14207 1427 aa27.93■■■□□ 2.06
DDR1-235ENST00000428153 A2MP01023 1474 aa27.93■■■□□ 2.06
DDR1-235ENST00000428153 STRCQ7RTU9 1775 aa27.93■■■□□ 2.06
DDR1-235ENST00000428153 CERKQ8TCT0 537 aa27.91■■■□□ 2.06
DDR1-235ENST00000428153 MBD5Q9P267 1494 aa27.9■■■□□ 2.06
DDR1-235ENST00000428153 RTEL1-TNFRSF6BF6WH68 1400 aa27.89■■■□□ 2.06
DDR1-235ENST00000428153 SUPT6HQ7KZ85 1726 aaKnown RBP27.89■■■□□ 2.05
DDR1-235ENST00000428153 ZMYM3Q14202 1370 aa27.88■■■□□ 2.05
DDR1-235ENST00000428153 PPP6R1Q9UPN7 881 aa27.88■■■□□ 2.05
DDR1-235ENST00000428153 ADGBQ8N7X0 1667 aa27.87■■■□□ 2.05
DDR1-235ENST00000428153 PTPRTO14522 1441 aa27.87■■■□□ 2.05
DDR1-235ENST00000428153 ZNF644Q9H582 1327 aaPredicted RBP27.83■■■□□ 2.05
DDR1-235ENST00000428153 RSPH4AQ5TD94 716 aa27.82■■■□□ 2.04
DDR1-235ENST00000428153 NCOA2Q15596 1464 aa27.81■■■□□ 2.04
DDR1-235ENST00000428153 NCOA1Q15788 1441 aa27.8■■■□□ 2.04
DDR1-235ENST00000428153 CLTCQ00610 1675 aaKnown RBP27.78■■■□□ 2.04
DDR1-235ENST00000428153 CCDC141Q6ZP82 1450 aa27.77■■■□□ 2.04
DDR1-235ENST00000428153 DHX29Q7Z478 1369 aaKnown RBP27.76■■■□□ 2.03
DDR1-235ENST00000428153 GGT6Q6P531 493 aa27.76■■■□□ 2.03
DDR1-235ENST00000428153 PTPRKQ15262 1439 aa27.75■■■□□ 2.03
DDR1-235ENST00000428153 VPS8Q8N3P4 1428 aa27.75■■■□□ 2.03
DDR1-235ENST00000428153 CAMSAP2Q08AD1 1489 aa27.74■■■□□ 2.03
DDR1-235ENST00000428153 FAM135AQ9P2D6 1515 aa27.73■■■□□ 2.03
DDR1-235ENST00000428153 ZNF142P52746 1687 aaPredicted RBP27.73■■■□□ 2.03
DDR1-235ENST00000428153 CAMSAP1Q5T5Y3 1602 aa27.71■■■□□ 2.03
DDR1-235ENST00000428153 ARHGEF5Q12774 1597 aa27.7■■■□□ 2.03
DDR1-235ENST00000428153 MYO3AQ8NEV4 1616 aa27.7■■■□□ 2.02
DDR1-235ENST00000428153 PLA2R1Q13018 1463 aa27.7■■■□□ 2.02
DDR1-235ENST00000428153 MAP3K1Q13233 1512 aa27.69■■■□□ 2.02
DDR1-235ENST00000428153 LRRC9Q6ZRR7 1453 aa27.69■■■□□ 2.02
DDR1-235ENST00000428153 CEP170BQ9Y4F5 1589 aaPredicted RBP27.66■■■□□ 2.02
DDR1-235ENST00000428153 IQSEC2Q5JU85 1478 aa27.66■■■□□ 2.02
DDR1-235ENST00000428153 LTBP4Q8N2S1 1624 aa27.64■■■□□ 2.02
DDR1-235ENST00000428153 PKD2Q13563 968 aa27.64■■■□□ 2.02
DDR1-235ENST00000428153 TSPY4P0CV99 314 aa27.63■■■□□ 2.01
DDR1-235ENST00000428153 TSPY10P0CW01 314 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms