RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 ZMYM4Q5VZL5 1548 aa24.34■■□□□ 1.49
PHF1-204ENST00000427826 POGZQ7Z3K3 1410 aa24.34■■□□□ 1.49
PHF1-204ENST00000427826 CEP162Q5TB80 1403 aa24.33■■□□□ 1.49
PHF1-204ENST00000427826 ARHGEF40Q8TER5 1519 aa24.32■■□□□ 1.48
PHF1-204ENST00000427826 ZFYVE16Q7Z3T8 1539 aa24.29■■□□□ 1.48
PHF1-204ENST00000427826 ZNF518AQ6AHZ1 1483 aa24.26■■□□□ 1.47
PHF1-204ENST00000427826 YEATS2Q9ULM3 1422 aa24.25■■□□□ 1.47
PHF1-204ENST00000427826 AFAP1Q8N556 730 aa24.23■■□□□ 1.47
PHF1-204ENST00000427826 MTUS2Q5JR59 1369 aa24.23■■□□□ 1.47
PHF1-204ENST00000427826 ADAMTSL3P82987 1691 aa24.23■■□□□ 1.47
PHF1-204ENST00000427826 LOC105371045A0A1W2PR82 267 aa24.22■■□□□ 1.47
PHF1-204ENST00000427826 PREX2Q70Z35 1606 aa24.21■■□□□ 1.47
PHF1-204ENST00000427826 BCORL1Q5H9F3 1711 aa24.21■■□□□ 1.47
PHF1-204ENST00000427826 CDC42BPBQ9Y5S2 1711 aa24.21■■□□□ 1.47
PHF1-204ENST00000427826 MYT1LQ9UL68 1186 aa24.2■■□□□ 1.46
PHF1-204ENST00000427826 ATP10AO60312 1499 aa24.19■■□□□ 1.46
PHF1-204ENST00000427826 PTPRMP28827 1452 aa24.19■■□□□ 1.46
PHF1-204ENST00000427826 CCNB3Q8WWL7 1395 aa24.16■■□□□ 1.46
PHF1-204ENST00000427826 KDM5CP41229 1560 aa24.16■■□□□ 1.46
PHF1-204ENST00000427826 GPATCH8Q9UKJ3 1502 aaKnown RBP24.16■■□□□ 1.46
PHF1-204ENST00000427826 C9orf84Q5VXU9 1444 aa24.16■■□□□ 1.46
PHF1-204ENST00000427826 CFDP1Q9UEE9 299 aaPredicted RBP24.15■■□□□ 1.46
PHF1-204ENST00000427826 ZNF777Q9ULD5 760 aaPredicted RBP24.15■■□□□ 1.46
PHF1-204ENST00000427826 ABCC1P33527 1531 aa24.15■■□□□ 1.46
PHF1-204ENST00000427826 CDC42BPAQ5VT25 1732 aa24.13■■□□□ 1.45
PHF1-204ENST00000427826 MLH3Q9UHC1 1453 aa24.13■■□□□ 1.45
PHF1-204ENST00000427826 TRAPPC8Q9Y2L5 1435 aa24.12■■□□□ 1.45
PHF1-204ENST00000427826 MADDQ8WXG6 1647 aa24.12■■□□□ 1.45
PHF1-204ENST00000427826 ARHGEF12Q9NZN5 1544 aa24.11■■□□□ 1.45
PHF1-204ENST00000427826 MLECQ14165 292 aa24.11■■□□□ 1.45
PHF1-204ENST00000427826 HECW2Q9P2P5 1572 aa24.11■■□□□ 1.45
PHF1-204ENST00000427826 EHBP1L1Q8N3D4 1523 aa24.1■■□□□ 1.45
PHF1-204ENST00000427826 PLEKHH2Q8IVE3 1493 aa24.08■■□□□ 1.45
PHF1-204ENST00000427826 KIAA1107Q9UPP5 1409 aa24.08■■□□□ 1.44
PHF1-204ENST00000427826 ITSN2Q9NZM3 1697 aa24.07■■□□□ 1.44
PHF1-204ENST00000427826 VPS8Q8N3P4 1428 aa24.07■■□□□ 1.44
PHF1-204ENST00000427826 HNRNPMP52272 730 aaKnown RBP eCLIP24.06■■□□□ 1.44
PHF1-204ENST00000427826 SIGLEC1Q9BZZ2 1709 aa24.04■■□□□ 1.44
PHF1-204ENST00000427826 SAMD9LQ8IVG5 1584 aa24.04■■□□□ 1.44
PHF1-204ENST00000427826 DIP2CQ9Y2E4 1556 aa24.03■■□□□ 1.44
PHF1-204ENST00000427826 RIMS1Q86UR5 1692 aaKnown RBP24.03■■□□□ 1.44
PHF1-204ENST00000427826 SPAG9O60271 1321 aaKnown RBP24.03■■□□□ 1.44
PHF1-204ENST00000427826 REREQ9P2R6 1566 aa24.03■■□□□ 1.44
PHF1-204ENST00000427826 SYCP2Q9BX26 1530 aa24.02■■□□□ 1.44
PHF1-204ENST00000427826 TIAM1Q13009 1591 aa23.99■■□□□ 1.43
PHF1-204ENST00000427826 ABCA6Q8N139 1617 aa23.99■■□□□ 1.43
PHF1-204ENST00000427826 AGLP35573 1532 aa23.97■■□□□ 1.43
PHF1-204ENST00000427826 PLPPR3Q6T4P5 718 aa23.97■■□□□ 1.43
PHF1-204ENST00000427826 NCOA2Q15596 1464 aa23.96■■□□□ 1.43
PHF1-204ENST00000427826 FER1L4A9Z1Z3 1794 aa23.96■■□□□ 1.43
PHF1-204ENST00000427826 KIDINS220Q9ULH0 1771 aa23.96■■□□□ 1.43
PHF1-204ENST00000427826 ZNF644Q9H582 1327 aaPredicted RBP23.95■■□□□ 1.42
PHF1-204ENST00000427826 SUPT6HQ7KZ85 1726 aaKnown RBP23.94■■□□□ 1.42
PHF1-204ENST00000427826 ESF1Q9H501 851 aaKnown RBP23.94■■□□□ 1.42
PHF1-204ENST00000427826 MAP3K1Q13233 1512 aa23.93■■□□□ 1.42
PHF1-204ENST00000427826 LRRC9Q6ZRR7 1453 aa23.93■■□□□ 1.42
PHF1-204ENST00000427826 RSPH4AQ5TD94 716 aa23.92■■□□□ 1.42
PHF1-204ENST00000427826 ATP7AQ04656 1500 aa23.9■■□□□ 1.42
PHF1-204ENST00000427826 LMTK3Q96Q04 1460 aa23.89■■□□□ 1.42
PHF1-204ENST00000427826 MBD5Q9P267 1494 aa23.89■■□□□ 1.42
PHF1-204ENST00000427826 APLP2Q06481 763 aa23.88■■□□□ 1.41
PHF1-204ENST00000427826 CEBPAP49715 358 aaPredicted RBP23.87■■□□□ 1.41
PHF1-204ENST00000427826 RTEL1-TNFRSF6BF6WH68 1400 aa23.86■■□□□ 1.41
PHF1-204ENST00000427826 INO80Q9ULG1 1556 aaPredicted RBP23.86■■□□□ 1.41
PHF1-204ENST00000427826 A2MP01023 1474 aa23.85■■□□□ 1.41
PHF1-204ENST00000427826 CNTLNQ9NXG0 1405 aa23.84■■□□□ 1.41
PHF1-204ENST00000427826 KANK4Q5T7N3 995 aaPredicted RBP23.84■■□□□ 1.41
PHF1-204ENST00000427826 CAMSAP2Q08AD1 1489 aa23.83■■□□□ 1.41
PHF1-204ENST00000427826 CCDC141Q6ZP82 1450 aa23.81■■□□□ 1.4
PHF1-204ENST00000427826 TSPY4P0CV99 314 aa23.8■■□□□ 1.4
PHF1-204ENST00000427826 TSPY10P0CW01 314 aa23.8■■□□□ 1.4
PHF1-204ENST00000427826 HSPA2P54652 639 aa23.79■■□□□ 1.4
PHF1-204ENST00000427826 PLXNC1O60486 1568 aa23.78■■□□□ 1.4
PHF1-204ENST00000427826 PPP6R1Q9UPN7 881 aa23.78■■□□□ 1.4
PHF1-204ENST00000427826 DHX29Q7Z478 1369 aaKnown RBP23.77■■□□□ 1.4
PHF1-204ENST00000427826 GGT6Q6P531 493 aa23.76■■□□□ 1.39
PHF1-204ENST00000427826 ADGBQ8N7X0 1667 aa23.76■■□□□ 1.39
PHF1-204ENST00000427826 MIA2Q96PC5 1412 aa23.76■■□□□ 1.39
PHF1-204ENST00000427826 MYOM3Q5VTT5 1437 aa23.75■■□□□ 1.39
PHF1-204ENST00000427826 ARHGEF5Q12774 1597 aa23.74■■□□□ 1.39
PHF1-204ENST00000427826 UHRF1BP1Q6BDS2 1440 aa23.74■■□□□ 1.39
PHF1-204ENST00000427826 PREX1Q8TCU6 1659 aa23.73■■□□□ 1.39
PHF1-204ENST00000427826 SETD1BQ9UPS6 1966 aaKnown RBP23.72■■□□□ 1.39
PHF1-204ENST00000427826 ZMYM3Q14202 1370 aa23.72■■□□□ 1.39
PHF1-204ENST00000427826 C3P01024 1663 aa23.7■■□□□ 1.39
PHF1-204ENST00000427826 MROH2AA6NES4 1674 aa23.68■■□□□ 1.38
PHF1-204ENST00000427826 NPATQ14207 1427 aa23.67■■□□□ 1.38
PHF1-204ENST00000427826 KIF3BO15066 747 aa23.67■■□□□ 1.38
PHF1-204ENST00000427826 ILDR1Q86SU0 546 aaPredicted RBP23.66■■□□□ 1.38
PHF1-204ENST00000427826 DMRT2Q9Y5R5 561 aa23.65■■□□□ 1.38
PHF1-204ENST00000427826 CLTCQ00610 1675 aaKnown RBP23.61■■□□□ 1.37
PHF1-204ENST00000427826 MAST1Q9Y2H9 1570 aa23.61■■□□□ 1.37
PHF1-204ENST00000427826 WASHC2CQ9Y4E1 1318 aa23.59■■□□□ 1.37
PHF1-204ENST00000427826 FAM135AQ9P2D6 1515 aa23.58■■□□□ 1.36
PHF1-204ENST00000427826 PTPRKQ15262 1439 aa23.58■■□□□ 1.36
PHF1-204ENST00000427826 FGD6Q6ZV73 1430 aa23.56■■□□□ 1.36
PHF1-204ENST00000427826 PTPN23Q9H3S7 1636 aa23.55■■□□□ 1.36
PHF1-204ENST00000427826 KDM5DQ9BY66 1539 aa23.54■■□□□ 1.36
PHF1-204ENST00000427826 ABCC5O15440 1437 aa23.52■■□□□ 1.36
PHF1-204ENST00000427826 TCOF1Q13428 1488 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms