RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 ZMYND15Q9H091 742 aa8.55□□□□□ -1.04
NUDCD1-202ENST00000427660 TRIM66O15016 1216 aa8.55□□□□□ -1.04
NUDCD1-202ENST00000427660 IL27Q8NEV9 243 aa8.55□□□□□ -1.04
NUDCD1-202ENST00000427660 GPHNQ9NQX3 736 aaPredicted RBP8.55□□□□□ -1.04
NUDCD1-202ENST00000427660 PDE4DQ08499 809 aa8.54□□□□□ -1.04
NUDCD1-202ENST00000427660 MKRN3Q13064 507 aaKnown RBP8.53□□□□□ -1.04
NUDCD1-202ENST00000427660 RSPH6AQ9H0K4 717 aa8.53□□□□□ -1.04
NUDCD1-202ENST00000427660 PDIA6Q15084 440 aa8.52□□□□□ -1.05
NUDCD1-202ENST00000427660 TMEM106CQ9BVX2 250 aa8.52□□□□□ -1.05
NUDCD1-202ENST00000427660 ZRANB1Q9UGI0 708 aa8.51□□□□□ -1.05
NUDCD1-202ENST00000427660 ILDR1Q86SU0 546 aaPredicted RBP8.5□□□□□ -1.05
NUDCD1-202ENST00000427660 DPYSL4O14531 572 aa8.49□□□□□ -1.05
NUDCD1-202ENST00000427660 EMILIN3Q9NT22 766 aa8.48□□□□□ -1.05
NUDCD1-202ENST00000427660 GPR37O15354 613 aa8.47□□□□□ -1.05
NUDCD1-202ENST00000427660 PHF12Q96QT6 1004 aa8.47□□□□□ -1.05
NUDCD1-202ENST00000427660 MINK1Q8N4C8 1332 aaPredicted RBP8.47□□□□□ -1.05
NUDCD1-202ENST00000427660 CD44P16070 742 aaKnown RBP8.46□□□□□ -1.05
NUDCD1-202ENST00000427660 DDRGK1Q96HY6 314 aa8.45□□□□□ -1.06
NUDCD1-202ENST00000427660 FOXK1P85037 733 aa8.44□□□□□ -1.06
NUDCD1-202ENST00000427660 DSG2Q14126 1118 aa8.44□□□□□ -1.06
NUDCD1-202ENST00000427660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.44□□□□□ -1.061e-6■■■■□ 21
NUDCD1-202ENST00000427660 UBTFP17480 764 aaKnown RBP8.43□□□□□ -1.06
NUDCD1-202ENST00000427660 TIE1P35590 1138 aa8.43□□□□□ -1.06
NUDCD1-202ENST00000427660 MAP2K5Q13163 448 aa8.43□□□□□ -1.06
NUDCD1-202ENST00000427660 FAM117AQ9C073 453 aa8.43□□□□□ -1.06
NUDCD1-202ENST00000427660 AMHR2Q16671 573 aa8.42□□□□□ -1.06
NUDCD1-202ENST00000427660 HAX1O00165 279 aa8.42□□□□□ -1.06
NUDCD1-202ENST00000427660 ZNF316A6NFI3 1004 aaPredicted RBP8.41□□□□□ -1.06
NUDCD1-202ENST00000427660 TMC2Q8TDI7 906 aa8.41□□□□□ -1.06
NUDCD1-202ENST00000427660 MS4A3Q96HJ5 214 aa8.41□□□□□ -1.06
NUDCD1-202ENST00000427660 PODXL2Q9NZ53 605 aa8.41□□□□□ -1.06
NUDCD1-202ENST00000427660 FLIIQ13045 1269 aa8.41□□□□□ -1.06
NUDCD1-202ENST00000427660 TRPC6Q9Y210 931 aa8.4□□□□□ -1.06
NUDCD1-202ENST00000427660 PLEKHG3A1L390 1219 aa8.39□□□□□ -1.07
NUDCD1-202ENST00000427660 IRF6O14896 467 aa8.39□□□□□ -1.07
NUDCD1-202ENST00000427660 CCDC102AQ96A19 550 aa8.39□□□□□ -1.07
NUDCD1-202ENST00000427660 GOPCQ9HD26 462 aa8.39□□□□□ -1.07
NUDCD1-202ENST00000427660 TTLL13PA6NNM8 815 aa8.38□□□□□ -1.07
NUDCD1-202ENST00000427660 MICALL2Q8IY33 904 aa8.38□□□□□ -1.07
NUDCD1-202ENST00000427660 NUTM2FA1L443 756 aa8.37□□□□□ -1.07
NUDCD1-202ENST00000427660 GNPATO15228 680 aa8.37□□□□□ -1.07
NUDCD1-202ENST00000427660 HIC1Q14526 733 aa8.37□□□□□ -1.07
NUDCD1-202ENST00000427660 PARP9Q8IXQ6 854 aa8.37□□□□□ -1.07
NUDCD1-202ENST00000427660 PLPP6Q8IY26 295 aa8.36□□□□□ -1.07
NUDCD1-202ENST00000427660 GRXCR2A6NFK2 248 aa8.34□□□□□ -1.07
NUDCD1-202ENST00000427660 FCHSD2O94868 740 aa8.34□□□□□ -1.07
NUDCD1-202ENST00000427660 MAP3K9P80192 1104 aa8.34□□□□□ -1.07
NUDCD1-202ENST00000427660 PTGER2P43116 358 aa8.34□□□□□ -1.07
NUDCD1-202ENST00000427660 OSBPP22059 807 aa8.33□□□□□ -1.08
NUDCD1-202ENST00000427660 KIF3CO14782 793 aa8.33□□□□□ -1.08
NUDCD1-202ENST00000427660 C1orf115Q9H7X2 142 aa8.33□□□□□ -1.08
NUDCD1-202ENST00000427660 BMP2KQ9NSY1 1161 aaPredicted RBP8.33□□□□□ -1.08
NUDCD1-202ENST00000427660 DPY19L2Q6NUT2 758 aa8.32□□□□□ -1.08
NUDCD1-202ENST00000427660 TMEM121BQ9BXQ6 578 aaPredicted RBP8.32□□□□□ -1.08
NUDCD1-202ENST00000427660 TRIM35Q9UPQ4 493 aa8.32□□□□□ -1.08
NUDCD1-202ENST00000427660 ONECUT3O60422 494 aaPredicted RBP8.31□□□□□ -1.08
NUDCD1-202ENST00000427660 C2orf72A6NCS6 295 aa8.3□□□□□ -1.08
NUDCD1-202ENST00000427660 PDCD7Q8N8D1 485 aaKnown RBP8.3□□□□□ -1.08
NUDCD1-202ENST00000427660 C19orf67A6NJJ6 358 aa8.29□□□□□ -1.08
NUDCD1-202ENST00000427660 TRIM26Q12899 539 aaPredicted RBP8.29□□□□□ -1.08
NUDCD1-202ENST00000427660 TTLL12Q14166 644 aaPredicted RBP8.29□□□□□ -1.08
NUDCD1-202ENST00000427660 ARID3AQ99856 593 aa8.29□□□□□ -1.08
NUDCD1-202ENST00000427660 A6NJR5 290 aa8.28□□□□□ -1.08
NUDCD1-202ENST00000427660 APBB1O00213 710 aa8.28□□□□□ -1.08
NUDCD1-202ENST00000427660 BOLA1Q9Y3E2 137 aa8.28□□□□□ -1.08
NUDCD1-202ENST00000427660 EVX2Q03828 476 aa8.27□□□□□ -1.09
NUDCD1-202ENST00000427660 OXER1Q8TDS5 423 aa8.27□□□□□ -1.09
NUDCD1-202ENST00000427660 PCMTD1Q96MG8 357 aaPredicted RBP8.27□□□□□ -1.09
NUDCD1-202ENST00000427660 FECHP22830 423 aa8.26□□□□□ -1.09
NUDCD1-202ENST00000427660 SP7Q8TDD2 431 aaPredicted RBP8.26□□□□□ -1.09
NUDCD1-202ENST00000427660 G3V3G9 751 aa8.26□□□□□ -1.09
NUDCD1-202ENST00000427660 PTGDRQ13258 359 aa8.26□□□□□ -1.09
NUDCD1-202ENST00000427660 TBC1D12O60347 775 aa8.25□□□□□ -1.09
NUDCD1-202ENST00000427660 RANGAP1P46060 587 aaPredicted RBP8.25□□□□□ -1.09
NUDCD1-202ENST00000427660 GIGYF2Q6Y7W6 1299 aaKnown RBP8.25□□□□□ -1.09
NUDCD1-202ENST00000427660 ARID3CA6NKF2 412 aa8.25□□□□□ -1.09
NUDCD1-202ENST00000427660 OCEL1Q9H607 264 aa8.25□□□□□ -1.09
NUDCD1-202ENST00000427660 DDX12PQ92771 950 aa8.24□□□□□ -1.09
NUDCD1-202ENST00000427660 CLCN6P51797 869 aa8.23□□□□□ -1.09
NUDCD1-202ENST00000427660 IRX5P78411 483 aaPredicted RBP8.23□□□□□ -1.09
NUDCD1-202ENST00000427660 SH3D19Q5HYK7 790 aa8.23□□□□□ -1.09
NUDCD1-202ENST00000427660 IER5LQ5T953 404 aa8.23□□□□□ -1.09
NUDCD1-202ENST00000427660 UPF1Q92900 1129 aaKnown RBP eCLIP8.23□□□□□ -1.09
NUDCD1-202ENST00000427660 MS4A1P11836 297 aa8.23□□□□□ -1.09
NUDCD1-202ENST00000427660 HRCP23327 699 aa8.23□□□□□ -1.09
NUDCD1-202ENST00000427660 TRAK2O60296 914 aa8.22□□□□□ -1.09
NUDCD1-202ENST00000427660 CLCN1P35523 988 aa8.2□□□□□ -1.1
NUDCD1-202ENST00000427660 EVI5O60447 810 aa8.2□□□□□ -1.1
NUDCD1-202ENST00000427660 MCM6Q14566 821 aa8.2□□□□□ -1.1
NUDCD1-202ENST00000427660 TMUB1Q9BVT8 246 aa8.2□□□□□ -1.1
NUDCD1-202ENST00000427660 PDIA4P13667 645 aaKnown RBP8.19□□□□□ -1.1
NUDCD1-202ENST00000427660 PRIM1P49642 420 aaKnown RBP8.19□□□□□ -1.1
NUDCD1-202ENST00000427660 L3MBTL3Q96JM7 780 aaPredicted RBP8.19□□□□□ -1.1
NUDCD1-202ENST00000427660 GALR2O43603 387 aaPredicted RBP8.18□□□□□ -1.1
NUDCD1-202ENST00000427660 CLUAP1Q96AJ1 413 aa8.18□□□□□ -1.1
NUDCD1-202ENST00000427660 REPIN1Q9BWE0 567 aaKnown RBP8.18□□□□□ -1.1
NUDCD1-202ENST00000427660 SKIV2LQ15477 1246 aaKnown RBP8.17□□□□□ -1.1
NUDCD1-202ENST00000427660 CCDC82Q8N4S0 544 aa8.17□□□□□ -1.1
NUDCD1-202ENST00000427660 GPCPD1Q9NPB8 672 aa8.17□□□□□ -1.1
NUDCD1-202ENST00000427660 ATN1P54259 1190 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms