RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 EFCAB2Q5VUJ9 269 aa39.62■■■■□ 3.93
HERPUD2-205ENST00000427455 SUPT6HQ7KZ85 1726 aaKnown RBP39.62■■■■□ 3.93
HERPUD2-205ENST00000427455 ADGRL1O94910 1474 aa39.59■■■■□ 3.93
HERPUD2-205ENST00000427455 GPATCH8Q9UKJ3 1502 aaKnown RBP39.58■■■■□ 3.93
HERPUD2-205ENST00000427455 DENND4BO75064 1496 aaPredicted RBP39.56■■■■□ 3.92
HERPUD2-205ENST00000427455 FRMPD1Q5SYB0 1578 aa39.56■■■■□ 3.92
HERPUD2-205ENST00000427455 APLP2Q06481 763 aa39.56■■■■□ 3.92
HERPUD2-205ENST00000427455 CCNB3Q8WWL7 1395 aa39.56■■■■□ 3.92
HERPUD2-205ENST00000427455 NCOA2Q15596 1464 aa39.54■■■■□ 3.92
HERPUD2-205ENST00000427455 RICTORQ6R327 1708 aa39.53■■■■□ 3.92
HERPUD2-205ENST00000427455 ITSN2Q9NZM3 1697 aa39.52■■■■□ 3.92
HERPUD2-205ENST00000427455 RAPGEF3O95398 923 aa39.5■■■■□ 3.91
HERPUD2-205ENST00000427455 SCAPERQ9BY12 1400 aa39.49■■■■□ 3.91
HERPUD2-205ENST00000427455 KANK4Q5T7N3 995 aaPredicted RBP39.48■■■■□ 3.91
HERPUD2-205ENST00000427455 ABCC1P33527 1531 aa39.46■■■■□ 3.91
HERPUD2-205ENST00000427455 POGZQ7Z3K3 1410 aa39.46■■■■□ 3.91
HERPUD2-205ENST00000427455 SAMD9LQ8IVG5 1584 aa39.42■■■■□ 3.9
HERPUD2-205ENST00000427455 ZMYM4Q5VZL5 1548 aa39.41■■■■□ 3.9
HERPUD2-205ENST00000427455 CFDP1Q9UEE9 299 aaPredicted RBP39.41■■■■□ 3.9
HERPUD2-205ENST00000427455 ZNF518AQ6AHZ1 1483 aa39.37■■■■□ 3.89
HERPUD2-205ENST00000427455 ZNF777Q9ULD5 760 aaPredicted RBP39.34■■■■□ 3.89
HERPUD2-205ENST00000427455 PLEKHH2Q8IVE3 1493 aa39.34■■■■□ 3.89
HERPUD2-205ENST00000427455 ARHGEF12Q9NZN5 1544 aa39.33■■■■□ 3.89
HERPUD2-205ENST00000427455 KDM5CP41229 1560 aa39.32■■■■□ 3.88
HERPUD2-205ENST00000427455 ARHGEF40Q8TER5 1519 aa39.31■■■■□ 3.88
HERPUD2-205ENST00000427455 SYCP2Q9BX26 1530 aa39.31■■■■□ 3.88
HERPUD2-205ENST00000427455 MAGI2Q86UL8 1455 aa39.3■■■■□ 3.88
HERPUD2-205ENST00000427455 KIAA1107Q9UPP5 1409 aa39.29■■■■□ 3.88
HERPUD2-205ENST00000427455 ZFYVE16Q7Z3T8 1539 aa39.25■■■■□ 3.87
HERPUD2-205ENST00000427455 TRAPPC8Q9Y2L5 1435 aa39.25■■■■□ 3.87
HERPUD2-205ENST00000427455 MYOM3Q5VTT5 1437 aa39.24■■■■□ 3.87
HERPUD2-205ENST00000427455 HECW2Q9P2P5 1572 aa39.22■■■■□ 3.87
HERPUD2-205ENST00000427455 AFAP1Q8N556 730 aa39.22■■■■□ 3.87
HERPUD2-205ENST00000427455 CAMSAP2Q08AD1 1489 aa39.2■■■■□ 3.87
HERPUD2-205ENST00000427455 ZNF644Q9H582 1327 aaPredicted RBP39.18■■■■□ 3.86
HERPUD2-205ENST00000427455 YEATS2Q9ULM3 1422 aa39.18■■■■□ 3.86
HERPUD2-205ENST00000427455 MIA2Q96PC5 1412 aa39.17■■■■□ 3.86
HERPUD2-205ENST00000427455 HNRNPMP52272 730 aaKnown RBP eCLIP39.15■■■■□ 3.86
HERPUD2-205ENST00000427455 MLH3Q9UHC1 1453 aa39.15■■■■□ 3.86
HERPUD2-205ENST00000427455 MBD5Q9P267 1494 aa39.12■■■■□ 3.85
HERPUD2-205ENST00000427455 KIDINS220Q9ULH0 1771 aa39.05■■■■□ 3.84
HERPUD2-205ENST00000427455 DIP2CQ9Y2E4 1556 aa39.05■■■■□ 3.84
HERPUD2-205ENST00000427455 ABCA6Q8N139 1617 aa39.05■■■■□ 3.84
HERPUD2-205ENST00000427455 ATP10AO60312 1499 aa39.05■■■■□ 3.84
HERPUD2-205ENST00000427455 ARHGEF5Q12774 1597 aa39.04■■■■□ 3.84
HERPUD2-205ENST00000427455 INO80Q9ULG1 1556 aaPredicted RBP39.04■■■■□ 3.84
HERPUD2-205ENST00000427455 MYT1LQ9UL68 1186 aa39.04■■■■□ 3.84
HERPUD2-205ENST00000427455 CCDC141Q6ZP82 1450 aa39.04■■■■□ 3.84
HERPUD2-205ENST00000427455 FGD6Q6ZV73 1430 aa39.03■■■■□ 3.84
HERPUD2-205ENST00000427455 SPAG9O60271 1321 aaKnown RBP39.02■■■■□ 3.84
HERPUD2-205ENST00000427455 C9orf84Q5VXU9 1444 aa39.02■■■■□ 3.84
HERPUD2-205ENST00000427455 PTPN23Q9H3S7 1636 aa39.01■■■■□ 3.84
HERPUD2-205ENST00000427455 ATP7AQ04656 1500 aa39.01■■■■□ 3.84
HERPUD2-205ENST00000427455 REREQ9P2R6 1566 aa38.97■■■■□ 3.83
HERPUD2-205ENST00000427455 RSPH4AQ5TD94 716 aa38.97■■■■□ 3.83
HERPUD2-205ENST00000427455 SIGLEC1Q9BZZ2 1709 aa38.97■■■■□ 3.83
HERPUD2-205ENST00000427455 KDM4FA0A1W2PPD8 638 aa38.95■■■■□ 3.83
HERPUD2-205ENST00000427455 TCOF1Q13428 1488 aaKnown RBP38.94■■■■□ 3.82
HERPUD2-205ENST00000427455 ARID4BQ4LE39 1312 aaPredicted RBP38.92■■■■□ 3.82
HERPUD2-205ENST00000427455 RTEL1-TNFRSF6BF6WH68 1400 aa38.91■■■■□ 3.82
HERPUD2-205ENST00000427455 BCORL1Q5H9F3 1711 aa38.91■■■■□ 3.82
HERPUD2-205ENST00000427455 PPARGC1BQ86YN6 1023 aaKnown RBP38.85■■■■□ 3.81
HERPUD2-205ENST00000427455 MAST1Q9Y2H9 1570 aa38.84■■■■□ 3.81
HERPUD2-205ENST00000427455 ADAMTSL3P82987 1691 aa38.84■■■■□ 3.81
HERPUD2-205ENST00000427455 ADGBQ8N7X0 1667 aa38.83■■■■□ 3.81
HERPUD2-205ENST00000427455 AGLP35573 1532 aa38.81■■■■□ 3.8
HERPUD2-205ENST00000427455 TSPY4P0CV99 314 aa38.81■■■■□ 3.8
HERPUD2-205ENST00000427455 TSPY10P0CW01 314 aa38.81■■■■□ 3.8
HERPUD2-205ENST00000427455 DNMT1P26358 1616 aaKnown RBP38.81■■■■□ 3.8
HERPUD2-205ENST00000427455 CROCC2H7BZ55 1655 aa38.81■■■■□ 3.8
HERPUD2-205ENST00000427455 PLXNC1O60486 1568 aa38.79■■■■□ 3.8
HERPUD2-205ENST00000427455 A2MP01023 1474 aa38.78■■■■□ 3.8
HERPUD2-205ENST00000427455 SHANK2Q9UPX8 1470 aa38.77■■■■□ 3.8
HERPUD2-205ENST00000427455 ABCC5O15440 1437 aa38.75■■■■□ 3.79
HERPUD2-205ENST00000427455 MADDQ8WXG6 1647 aa38.74■■■■□ 3.79
HERPUD2-205ENST00000427455 DAPK1P53355 1430 aa38.74■■■■□ 3.79
HERPUD2-205ENST00000427455 AEBP2Q6ZN18 517 aaPredicted RBP38.74■■■■□ 3.79
HERPUD2-205ENST00000427455 FAM50AQ14320 339 aaKnown RBP38.7■■■■□ 3.79
HERPUD2-205ENST00000427455 MLECQ14165 292 aa38.67■■■■□ 3.78
HERPUD2-205ENST00000427455 FER1L4A9Z1Z3 1794 aa38.65■■■■□ 3.78
HERPUD2-205ENST00000427455 DHX29Q7Z478 1369 aaKnown RBP38.64■■■■□ 3.78
HERPUD2-205ENST00000427455 RIMS1Q86UR5 1692 aaKnown RBP38.63■■■■□ 3.77
HERPUD2-205ENST00000427455 PTPRMP28827 1452 aa38.59■■■■□ 3.77
HERPUD2-205ENST00000427455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.58■■■■□ 3.77
HERPUD2-205ENST00000427455 RRBP1Q9P2E9 1410 aaKnown RBP38.56■■■■□ 3.76
HERPUD2-205ENST00000427455 DUOX2Q9NRD8 1548 aa38.53■■■■□ 3.76
HERPUD2-205ENST00000427455 KIF15Q9NS87 1388 aa38.52■■■■□ 3.76
HERPUD2-205ENST00000427455 ADGRL2O95490 1459 aa38.52■■■■□ 3.76
HERPUD2-205ENST00000427455 ANKRD30AQ9BXX3 1397 aa38.5■■■■□ 3.75
HERPUD2-205ENST00000427455 EIF2AK4Q9P2K8 1649 aaKnown RBP38.49■■■■□ 3.75
HERPUD2-205ENST00000427455 CHIC2Q9UKJ5 165 aa38.47■■■■□ 3.75
HERPUD2-205ENST00000427455 NCOA1Q15788 1441 aa38.46■■■■□ 3.75
HERPUD2-205ENST00000427455 CNTLNQ9NXG0 1405 aa38.44■■■■□ 3.74
HERPUD2-205ENST00000427455 KIF3BO15066 747 aa38.43■■■■□ 3.74
HERPUD2-205ENST00000427455 RRP7BPQ9NSQ0 103 aa38.43■■■■□ 3.74
HERPUD2-205ENST00000427455 PTPRKQ15262 1439 aa38.43■■■■□ 3.74
HERPUD2-205ENST00000427455 ERBINQ96RT1 1412 aa38.43■■■■□ 3.74
HERPUD2-205ENST00000427455 ESF1Q9H501 851 aaKnown RBP38.42■■■■□ 3.74
HERPUD2-205ENST00000427455 RNF17Q9BXT8 1623 aaKnown RBP38.41■■■■□ 3.74
HERPUD2-205ENST00000427455 GGT6Q6P531 493 aa38.41■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms