RNA–Protein interactions for RNA: ENST00000427404.5

FARP1-204, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-204ENST00000427404 ADGRL1O94910 1474 aa11.67□□□□□ -0.54
FARP1-204ENST00000427404 ZMYM4Q5VZL5 1548 aa11.65□□□□□ -0.54
FARP1-204ENST00000427404 RAPGEF3O95398 923 aa11.65□□□□□ -0.54
FARP1-204ENST00000427404 ARHGEF40Q8TER5 1519 aa11.64□□□□□ -0.55
FARP1-204ENST00000427404 EFCAB2Q5VUJ9 269 aa11.63□□□□□ -0.55
FARP1-204ENST00000427404 PLPPR3Q6T4P5 718 aa11.63□□□□□ -0.55
FARP1-204ENST00000427404 PREX2Q70Z35 1606 aa11.63□□□□□ -0.55
FARP1-204ENST00000427404 POGZQ7Z3K3 1410 aa11.62□□□□□ -0.55
FARP1-204ENST00000427404 MAGI2Q86UL8 1455 aa11.62□□□□□ -0.55
FARP1-204ENST00000427404 SCAPERQ9BY12 1400 aa11.61□□□□□ -0.55
FARP1-204ENST00000427404 ARHGAP5Q13017 1502 aa11.61□□□□□ -0.55
FARP1-204ENST00000427404 CDC42BPBQ9Y5S2 1711 aa11.61□□□□□ -0.55
FARP1-204ENST00000427404 CDC42BPAQ5VT25 1732 aa11.59□□□□□ -0.55
FARP1-204ENST00000427404 ZFYVE16Q7Z3T8 1539 aa11.59□□□□□ -0.55
FARP1-204ENST00000427404 LOC105371045A0A1W2PR82 267 aa11.58□□□□□ -0.56
FARP1-204ENST00000427404 ABCC1P33527 1531 aa11.58□□□□□ -0.56
FARP1-204ENST00000427404 EHBP1L1Q8N3D4 1523 aa11.58□□□□□ -0.56
FARP1-204ENST00000427404 KDM5CP41229 1560 aa11.58□□□□□ -0.56
FARP1-204ENST00000427404 ZNF518AQ6AHZ1 1483 aa11.57□□□□□ -0.56
FARP1-204ENST00000427404 VPS8Q8N3P4 1428 aa11.57□□□□□ -0.56
FARP1-204ENST00000427404 MTUS2Q5JR59 1369 aa11.56□□□□□ -0.56
FARP1-204ENST00000427404 GPATCH8Q9UKJ3 1502 aaKnown RBP11.56□□□□□ -0.56
FARP1-204ENST00000427404 ADAMTSL3P82987 1691 aa11.56□□□□□ -0.56
FARP1-204ENST00000427404 BCORL1Q5H9F3 1711 aa11.56□□□□□ -0.56
FARP1-204ENST00000427404 YEATS2Q9ULM3 1422 aa11.56□□□□□ -0.56
FARP1-204ENST00000427404 ITSN2Q9NZM3 1697 aa11.55□□□□□ -0.56
FARP1-204ENST00000427404 ARHGEF12Q9NZN5 1544 aa11.54□□□□□ -0.56
FARP1-204ENST00000427404 TIAM1Q13009 1591 aa11.54□□□□□ -0.56
FARP1-204ENST00000427404 HECW2Q9P2P5 1572 aa11.54□□□□□ -0.56
FARP1-204ENST00000427404 MLH3Q9UHC1 1453 aa11.53□□□□□ -0.56
FARP1-204ENST00000427404 PPP6R1Q9UPN7 881 aa11.53□□□□□ -0.56
FARP1-204ENST00000427404 SAMD9LQ8IVG5 1584 aa11.53□□□□□ -0.56
FARP1-204ENST00000427404 CCNB3Q8WWL7 1395 aa11.53□□□□□ -0.56
FARP1-204ENST00000427404 C9orf84Q5VXU9 1444 aa11.52□□□□□ -0.56
FARP1-204ENST00000427404 SIGLEC1Q9BZZ2 1709 aa11.52□□□□□ -0.56
FARP1-204ENST00000427404 ATP10AO60312 1499 aa11.52□□□□□ -0.56
FARP1-204ENST00000427404 MAP3K1Q13233 1512 aa11.52□□□□□ -0.57
FARP1-204ENST00000427404 KIAA1107Q9UPP5 1409 aa11.52□□□□□ -0.57
FARP1-204ENST00000427404 TRAPPC8Q9Y2L5 1435 aa11.52□□□□□ -0.57
FARP1-204ENST00000427404 PLEKHH2Q8IVE3 1493 aa11.51□□□□□ -0.57
FARP1-204ENST00000427404 REREQ9P2R6 1566 aa11.51□□□□□ -0.57
FARP1-204ENST00000427404 DIP2CQ9Y2E4 1556 aa11.5□□□□□ -0.57
FARP1-204ENST00000427404 MADDQ8WXG6 1647 aa11.5□□□□□ -0.57
FARP1-204ENST00000427404 SUPT6HQ7KZ85 1726 aaKnown RBP11.5□□□□□ -0.57
FARP1-204ENST00000427404 AFAP1Q8N556 730 aa11.5□□□□□ -0.57
FARP1-204ENST00000427404 ARID4BQ4LE39 1312 aaPredicted RBP11.5□□□□□ -0.57
FARP1-204ENST00000427404 PTPRMP28827 1452 aa11.5□□□□□ -0.57
FARP1-204ENST00000427404 SYCP2Q9BX26 1530 aa11.5□□□□□ -0.57
FARP1-204ENST00000427404 CFDP1Q9UEE9 299 aaPredicted RBP11.49□□□□□ -0.57
FARP1-204ENST00000427404 ABCA6Q8N139 1617 aa11.49□□□□□ -0.57
FARP1-204ENST00000427404 ADRA2BP18089 450 aa11.48□□□□□ -0.57
FARP1-204ENST00000427404 NCOA2Q15596 1464 aa11.48□□□□□ -0.57
FARP1-204ENST00000427404 LRRC9Q6ZRR7 1453 aa11.48□□□□□ -0.57
FARP1-204ENST00000427404 KIDINS220Q9ULH0 1771 aa11.47□□□□□ -0.57
FARP1-204ENST00000427404 AGLP35573 1532 aa11.46□□□□□ -0.57
FARP1-204ENST00000427404 ZNF777Q9ULD5 760 aaPredicted RBP11.46□□□□□ -0.57
FARP1-204ENST00000427404 RIMS1Q86UR5 1692 aaKnown RBP11.46□□□□□ -0.58
FARP1-204ENST00000427404 INO80Q9ULG1 1556 aaPredicted RBP11.45□□□□□ -0.58
FARP1-204ENST00000427404 MBD5Q9P267 1494 aa11.44□□□□□ -0.58
FARP1-204ENST00000427404 FER1L4A9Z1Z3 1794 aa11.44□□□□□ -0.58
FARP1-204ENST00000427404 ATP7AQ04656 1500 aa11.44□□□□□ -0.58
FARP1-204ENST00000427404 HNRNPMP52272 730 aaKnown RBP eCLIP11.43□□□□□ -0.58
FARP1-204ENST00000427404 SPAG9O60271 1321 aaKnown RBP11.42□□□□□ -0.58
FARP1-204ENST00000427404 MYT1LQ9UL68 1186 aa11.42□□□□□ -0.58
FARP1-204ENST00000427404 CAMSAP2Q08AD1 1489 aa11.42□□□□□ -0.58
FARP1-204ENST00000427404 PLXNC1O60486 1568 aa11.41□□□□□ -0.58
FARP1-204ENST00000427404 ZNF644Q9H582 1327 aaPredicted RBP11.41□□□□□ -0.58
FARP1-204ENST00000427404 RTEL1-TNFRSF6BF6WH68 1400 aa11.41□□□□□ -0.58
FARP1-204ENST00000427404 CCDC141Q6ZP82 1450 aa11.4□□□□□ -0.58
FARP1-204ENST00000427404 MLECQ14165 292 aa11.4□□□□□ -0.58
FARP1-204ENST00000427404 KANK4Q5T7N3 995 aaPredicted RBP11.4□□□□□ -0.58
FARP1-204ENST00000427404 ARHGEF5Q12774 1597 aa11.4□□□□□ -0.58
FARP1-204ENST00000427404 MYOM3Q5VTT5 1437 aa11.39□□□□□ -0.59
FARP1-204ENST00000427404 MIA2Q96PC5 1412 aa11.39□□□□□ -0.59
FARP1-204ENST00000427404 RSPH4AQ5TD94 716 aa11.38□□□□□ -0.59
FARP1-204ENST00000427404 ADGBQ8N7X0 1667 aa11.38□□□□□ -0.59
FARP1-204ENST00000427404 A2MP01023 1474 aa11.38□□□□□ -0.59
FARP1-204ENST00000427404 LMTK3Q96Q04 1460 aa11.37□□□□□ -0.59
FARP1-204ENST00000427404 APLP2Q06481 763 aa11.36□□□□□ -0.59
FARP1-204ENST00000427404 CNTLNQ9NXG0 1405 aa11.35□□□□□ -0.59
FARP1-204ENST00000427404 MAST1Q9Y2H9 1570 aa11.35□□□□□ -0.59
FARP1-204ENST00000427404 MROH2AA6NES4 1674 aa11.34□□□□□ -0.59
FARP1-204ENST00000427404 DHX29Q7Z478 1369 aaKnown RBP11.33□□□□□ -0.6
FARP1-204ENST00000427404 C3P01024 1663 aa11.33□□□□□ -0.6
FARP1-204ENST00000427404 PREX1Q8TCU6 1659 aa11.32□□□□□ -0.6
FARP1-204ENST00000427404 FAM135AQ9P2D6 1515 aa11.31□□□□□ -0.6
FARP1-204ENST00000427404 TCOF1Q13428 1488 aaKnown RBP11.31□□□□□ -0.6
FARP1-204ENST00000427404 PTPN23Q9H3S7 1636 aa11.31□□□□□ -0.6
FARP1-204ENST00000427404 SETD1BQ9UPS6 1966 aaKnown RBP11.3□□□□□ -0.6
FARP1-204ENST00000427404 FGD6Q6ZV73 1430 aa11.3□□□□□ -0.6
FARP1-204ENST00000427404 TSPY4P0CV99 314 aa11.3□□□□□ -0.6
FARP1-204ENST00000427404 TSPY10P0CW01 314 aa11.3□□□□□ -0.6
FARP1-204ENST00000427404 ESF1Q9H501 851 aaKnown RBP11.3□□□□□ -0.6
FARP1-204ENST00000427404 SHANK2Q9UPX8 1470 aa11.3□□□□□ -0.6
FARP1-204ENST00000427404 NPATQ14207 1427 aa11.29□□□□□ -0.6
FARP1-204ENST00000427404 CEBPAP49715 358 aaPredicted RBP11.29□□□□□ -0.6
FARP1-204ENST00000427404 CROCC2H7BZ55 1655 aa11.29□□□□□ -0.6
FARP1-204ENST00000427404 CLTCQ00610 1675 aaKnown RBP11.28□□□□□ -0.6
FARP1-204ENST00000427404 ZMYM3Q14202 1370 aa11.28□□□□□ -0.6
FARP1-204ENST00000427404 DNMT1P26358 1616 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms