RNA–Protein interactions for RNA: ENST00000427404.5

FARP1-204, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-204ENST00000427404 NISCHQ9Y2I1 1504 aa17.86■□□□□ 0.45
FARP1-204ENST00000427404 CCDC180Q9P1Z9 1646 aa15.97■□□□□ 0.15
FARP1-204ENST00000427404 AEBP2Q6ZN18 517 aaPredicted RBP15.77■□□□□ 0.12
FARP1-204ENST00000427404 ABCC9O60706 1549 aa15.65■□□□□ 0.1
FARP1-204ENST00000427404 RB1CC1Q8TDY2 1594 aa15.06■□□□□ 0
FARP1-204ENST00000427404 NACADO15069 1562 aa15.02■□□□□ -0
FARP1-204ENST00000427404 MYO15BQ96JP2 1530 aa14.94□□□□□ -0.02
FARP1-204ENST00000427404 ZCCHC6Q5VYS8 1495 aaKnown RBP14.88□□□□□ -0.03
FARP1-204ENST00000427404 DCAF8L2P0C7V8 631 aa14.84□□□□□ -0.03
FARP1-204ENST00000427404 DCAF1Q9Y4B6 1507 aa14.82□□□□□ -0.04
FARP1-204ENST00000427404 CHIC1Q5VXU3 224 aa14.81□□□□□ -0.04
FARP1-204ENST00000427404 UNC13AQ9UPW8 1703 aa14.7□□□□□ -0.06
FARP1-204ENST00000427404 BICRAQ9NZM4 1560 aa14.6□□□□□ -0.07
FARP1-204ENST00000427404 PABPN1Q86U42 306 aaKnown RBP eCLIP14.57□□□□□ -0.08
FARP1-204ENST00000427404 SHROOM4Q9ULL8 1493 aa14.5□□□□□ -0.09
FARP1-204ENST00000427404 SCRIBQ14160 1630 aa14.49□□□□□ -0.09
FARP1-204ENST00000427404 DNAJC5BQ9UF47 199 aa14.45□□□□□ -0.1
FARP1-204ENST00000427404 EIF4G1Q04637 1599 aaKnown RBP14.22□□□□□ -0.13
FARP1-204ENST00000427404 CC2D2AQ9P2K1 1620 aa14.18□□□□□ -0.14
FARP1-204ENST00000427404 CECR2Q9BXF3 1484 aa14.1□□□□□ -0.15
FARP1-204ENST00000427404 SMARCA4P51532 1647 aa13.88□□□□□ -0.19
FARP1-204ENST00000427404 NCAPD3P42695 1498 aa13.86□□□□□ -0.19
FARP1-204ENST00000427404 BAZ1AQ9NRL2 1556 aaPredicted RBP13.85□□□□□ -0.19
FARP1-204ENST00000427404 ATAD2BQ9ULI0 1458 aa13.84□□□□□ -0.19
FARP1-204ENST00000427404 SMARCA2P51531 1590 aa13.83□□□□□ -0.2
FARP1-204ENST00000427404 HMGXB3Q12766 1538 aa13.8□□□□□ -0.2
FARP1-204ENST00000427404 PEG3Q9GZU2 1588 aa13.79□□□□□ -0.2
FARP1-204ENST00000427404 MROH2BQ7Z745 1585 aa13.75□□□□□ -0.21
FARP1-204ENST00000427404 BAZ1BQ9UIG0 1483 aaKnown RBP13.71□□□□□ -0.21
FARP1-204ENST00000427404 SENP3Q9H4L4 574 aaPredicted RBP13.58□□□□□ -0.24
FARP1-204ENST00000427404 WIZO95785 1651 aa13.57□□□□□ -0.24
FARP1-204ENST00000427404 RSF1Q96T23 1441 aaPredicted RBP13.55□□□□□ -0.24
FARP1-204ENST00000427404 LAMC3Q9Y6N6 1575 aa13.52□□□□□ -0.25
FARP1-204ENST00000427404 NESP48681 1621 aa13.51□□□□□ -0.25
FARP1-204ENST00000427404 ERCC6Q03468 1493 aa13.51□□□□□ -0.25
FARP1-204ENST00000427404 TOP2AP11388 1531 aaKnown RBP13.46□□□□□ -0.25
FARP1-204ENST00000427404 CUX2O14529 1486 aa13.46□□□□□ -0.25
FARP1-204ENST00000427404 CADPSQ9ULU8 1353 aa13.43□□□□□ -0.26
FARP1-204ENST00000427404 PDS5BQ9NTI5 1447 aa13.4□□□□□ -0.26
FARP1-204ENST00000427404 THOC2Q8NI27 1593 aaKnown RBP13.38□□□□□ -0.27
FARP1-204ENST00000427404 KIF21AQ7Z4S6 1674 aa13.37□□□□□ -0.27
FARP1-204ENST00000427404 CFTRP13569 1480 aa13.34□□□□□ -0.27
FARP1-204ENST00000427404 PHF23Q9BUL5 403 aaPredicted RBP13.31□□□□□ -0.28
FARP1-204ENST00000427404 MRC2Q9UBG0 1479 aa13.29□□□□□ -0.28
FARP1-204ENST00000427404 CCDC88BA6NC98 1476 aa13.28□□□□□ -0.28
FARP1-204ENST00000427404 FANCD2Q9BXW9 1451 aa13.27□□□□□ -0.29
FARP1-204ENST00000427404 CEP164Q9UPV0 1460 aa13.27□□□□□ -0.29
FARP1-204ENST00000427404 WDR62O43379 1518 aa13.26□□□□□ -0.29
FARP1-204ENST00000427404 PRDM2Q13029 1718 aa13.25□□□□□ -0.29
FARP1-204ENST00000427404 URB2Q14146 1524 aaKnown RBP13.14□□□□□ -0.31
FARP1-204ENST00000427404 DNAJC5Q9H3Z4 198 aa13.13□□□□□ -0.31
FARP1-204ENST00000427404 ABCC8Q09428 1581 aa13.07□□□□□ -0.32
FARP1-204ENST00000427404 TOPBP1Q92547 1522 aa13.05□□□□□ -0.32
FARP1-204ENST00000427404 DNMBPQ6XZF7 1577 aa13.04□□□□□ -0.32
FARP1-204ENST00000427404 SUPT5HO00267 1087 aaKnown RBP13.02□□□□□ -0.33
FARP1-204ENST00000427404 IFT140Q96RY7 1462 aa13.01□□□□□ -0.33
FARP1-204ENST00000427404 POLA1P09884 1462 aaPredicted RBP12.93□□□□□ -0.34
FARP1-204ENST00000427404 TARBP1Q13395 1621 aaKnown RBP12.93□□□□□ -0.34
FARP1-204ENST00000427404 ZNF608Q9ULD9 1512 aaPredicted RBP12.93□□□□□ -0.34
FARP1-204ENST00000427404 CUX1P39880 1505 aa12.91□□□□□ -0.34
FARP1-204ENST00000427404 EIF4G3O43432 1585 aaKnown RBP12.9□□□□□ -0.35
FARP1-204ENST00000427404 FGD5Q6ZNL6 1462 aa12.87□□□□□ -0.35
FARP1-204ENST00000427404 WDR97A6NE52 1622 aa12.87□□□□□ -0.35
FARP1-204ENST00000427404 SOGA1O94964 1423 aa12.86□□□□□ -0.35
FARP1-204ENST00000427404 RAD54L2Q9Y4B4 1467 aa12.85□□□□□ -0.35
FARP1-204ENST00000427404 AQRO60306 1485 aaKnown RBP eCLIP12.83□□□□□ -0.36
FARP1-204ENST00000427404 OSCARQ8IYS5 282 aa12.82□□□□□ -0.36
FARP1-204ENST00000427404 BIVM-ERCC5R4GMW8 1640 aa12.79□□□□□ -0.36
FARP1-204ENST00000427404 TDRD9Q8NDG6 1382 aaKnown RBP12.78□□□□□ -0.36
FARP1-204ENST00000427404 WRNQ14191 1432 aaPredicted RBP eCLIP12.78□□□□□ -0.36
FARP1-204ENST00000427404 ABCA10Q8WWZ4 1543 aa12.78□□□□□ -0.36
FARP1-204ENST00000427404 TOP2BQ02880 1626 aa12.77□□□□□ -0.36
FARP1-204ENST00000427404 SYNJ1O43426 1573 aa12.75□□□□□ -0.37
FARP1-204ENST00000427404 CHD1O14646 1710 aa12.74□□□□□ -0.37
FARP1-204ENST00000427404 GRIN2BQ13224 1484 aa12.74□□□□□ -0.37
FARP1-204ENST00000427404 MAGI1Q96QZ7 1491 aaPredicted RBP12.74□□□□□ -0.37
FARP1-204ENST00000427404 ABCA5Q8WWZ7 1642 aa12.73□□□□□ -0.37
FARP1-204ENST00000427404 SNAPC4Q5SXM2 1469 aa12.73□□□□□ -0.37
FARP1-204ENST00000427404 GAPVD1Q14C86 1478 aa12.72□□□□□ -0.37
FARP1-204ENST00000427404 PBRM1Q86U86 1689 aa12.7□□□□□ -0.38
FARP1-204ENST00000427404 SYNJ2O15056 1496 aa12.68□□□□□ -0.38
FARP1-204ENST00000427404 RIMBP3CA6NJZ7 1639 aa12.66□□□□□ -0.38
FARP1-204ENST00000427404 RIMBP3BA6NNM3 1639 aa12.66□□□□□ -0.38
FARP1-204ENST00000427404 RIMBP3Q9UFD9 1639 aa12.66□□□□□ -0.38
FARP1-204ENST00000427404 ARHGEF11O15085 1522 aa12.64□□□□□ -0.39
FARP1-204ENST00000427404 FBLN2P98095 1184 aa12.64□□□□□ -0.39
FARP1-204ENST00000427404 FOXD1Q16676 465 aa12.64□□□□□ -0.39
FARP1-204ENST00000427404 CLASP1Q7Z460 1538 aa12.63□□□□□ -0.39
FARP1-204ENST00000427404 CHMP7Q8WUX9 453 aaPredicted RBP12.63□□□□□ -0.39
FARP1-204ENST00000427404 ADAMTS12P58397 1594 aa12.62□□□□□ -0.39
FARP1-204ENST00000427404 ERICH3Q5RHP9 1530 aa12.62□□□□□ -0.39
FARP1-204ENST00000427404 TRIM41Q8WV44 630 aa12.59□□□□□ -0.39
FARP1-204ENST00000427404 FHAD1B1AJZ9 1412 aa12.58□□□□□ -0.4
FARP1-204ENST00000427404 GRIN2AQ12879 1464 aa12.58□□□□□ -0.4
FARP1-204ENST00000427404 NUP160Q12769 1436 aa12.54□□□□□ -0.4
FARP1-204ENST00000427404 ARAP1Q96P48 1450 aa12.54□□□□□ -0.4
FARP1-204ENST00000427404 CEP170Q5SW79 1584 aa12.52□□□□□ -0.4
FARP1-204ENST00000427404 KIF27Q86VH2 1401 aa12.52□□□□□ -0.41
FARP1-204ENST00000427404 CUL7Q14999 1698 aa12.48□□□□□ -0.41
FARP1-204ENST00000427404 IGF1RP08069 1367 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 267.6 ms