RNA–Protein interactions for RNA: ENST00000427231.6

NEB-209, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-209ENST00000427231 P3H3Q8IVL6 736 aa3.27□□□□□ -1.89
NEB-209ENST00000427231 ZNF428Q96B54 188 aa3.26□□□□□ -1.89
NEB-209ENST00000427231 PPM1GO15355 546 aaPredicted RBP3.26□□□□□ -1.89
NEB-209ENST00000427231 ZNF771Q7L3S4 317 aaPredicted RBP3.26□□□□□ -1.89
NEB-209ENST00000427231 PPP6R1Q9UPN7 881 aa3.26□□□□□ -1.89
NEB-209ENST00000427231 TRERF1Q96PN7 1200 aa3.25□□□□□ -1.89
NEB-209ENST00000427231 CEP162Q5TB80 1403 aa3.25□□□□□ -1.89
NEB-209ENST00000427231 ZBTB9Q96C00 473 aa3.25□□□□□ -1.89
NEB-209ENST00000427231 SOX12O15370 315 aa3.25□□□□□ -1.89
NEB-209ENST00000427231 OS9Q13438 667 aaPredicted RBP3.25□□□□□ -1.89
NEB-209ENST00000427231 CASC1Q6TDU7 716 aa3.25□□□□□ -1.89
NEB-209ENST00000427231 HOMEZQ8IX15 550 aa3.25□□□□□ -1.89
NEB-209ENST00000427231 TMED8Q6PL24 325 aaPredicted RBP3.25□□□□□ -1.89
NEB-209ENST00000427231 PHLDB1Q86UU1 1377 aa3.25□□□□□ -1.89
NEB-209ENST00000427231 LRRFIP1Q32MZ4 808 aaKnown RBP3.24□□□□□ -1.89
NEB-209ENST00000427231 OSCARQ8IYS5 282 aa3.24□□□□□ -1.89
NEB-209ENST00000427231 CSPP1Q1MSJ5 1256 aa3.24□□□□□ -1.89
NEB-209ENST00000427231 CT47B1P0C2W7 299 aaPredicted RBP3.24□□□□□ -1.89
NEB-209ENST00000427231 CC2D1BQ5T0F9 858 aaKnown RBP3.24□□□□□ -1.89
NEB-209ENST00000427231 NUDCQ9Y266 331 aa3.24□□□□□ -1.89
NEB-209ENST00000427231 STAG3Q9UJ98 1225 aa3.24□□□□□ -1.89
NEB-209ENST00000427231 KTN1Q86UP2 1357 aaKnown RBP3.24□□□□□ -1.89
NEB-209ENST00000427231 TNNT1P13805 278 aa3.24□□□□□ -1.89
NEB-209ENST00000427231 IGSF3O75054 1194 aa3.24□□□□□ -1.89
NEB-209ENST00000427231 TUBB4BP68371 445 aa3.23□□□□□ -1.89
NEB-209ENST00000427231 HNRNPUQ00839 825 aaKnown RBP eCLIP3.23□□□□□ -1.89
NEB-209ENST00000427231 TPM2P07951 284 aa3.23□□□□□ -1.89
NEB-209ENST00000427231 GPATCH11Q8N954 259 aa3.23□□□□□ -1.89
NEB-209ENST00000427231 HSP90B1P14625 803 aaKnown RBP3.23□□□□□ -1.89
NEB-209ENST00000427231 GSE1Q14687 1217 aa3.23□□□□□ -1.89
NEB-209ENST00000427231 SECISBP2LQ93073 1101 aaKnown RBP3.23□□□□□ -1.89
NEB-209ENST00000427231 HTATSF1O43719 755 aaKnown RBP3.23□□□□□ -1.89
NEB-209ENST00000427231 IPO4Q8TEX9 1081 aaKnown RBP3.23□□□□□ -1.89
NEB-209ENST00000427231 FAM9BQ8IZU0 186 aa3.23□□□□□ -1.89
NEB-209ENST00000427231 ROCK2O75116 1388 aaKnown RBP3.23□□□□□ -1.89
NEB-209ENST00000427231 KIF3AQ9Y496 699 aa3.23□□□□□ -1.89
NEB-209ENST00000427231 FRAT1Q92837 279 aaPredicted RBP3.23□□□□□ -1.89
NEB-209ENST00000427231 PLEKHD1A6NEE1 506 aa3.22□□□□□ -1.89
NEB-209ENST00000427231 PTMAP06454 111 aaKnown RBP3.22□□□□□ -1.89
NEB-209ENST00000427231 RALBP1Q15311 655 aa3.22□□□□□ -1.89
NEB-209ENST00000427231 SKIDA1Q1XH10 827 aa3.22□□□□□ -1.89
NEB-209ENST00000427231 KCNJ4P48050 445 aa3.22□□□□□ -1.89
NEB-209ENST00000427231 IPO8O15397 1037 aaKnown RBP3.22□□□□□ -1.89
NEB-209ENST00000427231 FAM50AQ14320 339 aaKnown RBP3.21□□□□□ -1.89
NEB-209ENST00000427231 MEX3CQ5U5Q3 659 aaKnown RBP3.21□□□□□ -1.89
NEB-209ENST00000427231 NT5C2P49902 561 aa3.21□□□□□ -1.9
NEB-209ENST00000427231 GOLGA6L3A6NEY3 463 aa3.21□□□□□ -1.9
NEB-209ENST00000427231 CAVIN1Q6NZI2 390 aaKnown RBP3.21□□□□□ -1.9
NEB-209ENST00000427231 GOLGA6L6A8MZA4 724 aa3.21□□□□□ -1.9
NEB-209ENST00000427231 FHAD1B1AJZ9 1412 aa3.21□□□□□ -1.9
NEB-209ENST00000427231 ATP6V1DQ9Y5K8 247 aa3.21□□□□□ -1.9
NEB-209ENST00000427231 FTSJ3Q8IY81 847 aaKnown RBP3.21□□□□□ -1.9
NEB-209ENST00000427231 CBX1P83916 185 aa3.21□□□□□ -1.9
NEB-209ENST00000427231 CYB5RLQ6IPT4 315 aa3.2□□□□□ -1.9
NEB-209ENST00000427231 PLCB2Q00722 1185 aa3.2□□□□□ -1.9
NEB-209ENST00000427231 MYH16Q9H6N6 1097 aa3.2□□□□□ -1.9
NEB-209ENST00000427231 RRP9O43818 475 aaKnown RBP3.2□□□□□ -1.9
NEB-209ENST00000427231 SETD5Q9C0A6 1442 aa3.2□□□□□ -1.9
NEB-209ENST00000427231 CFAP53Q96M91 514 aa3.2□□□□□ -1.9
NEB-209ENST00000427231 BRD2P25440 801 aaKnown RBP3.2□□□□□ -1.9
NEB-209ENST00000427231 TUBB4AP04350 444 aa3.2□□□□□ -1.9
NEB-209ENST00000427231 CLIP1P30622 1438 aa3.2□□□□□ -1.9
NEB-209ENST00000427231 PHF14O94880 888 aa3.2□□□□□ -1.9
NEB-209ENST00000427231 IPO9Q96P70 1041 aaKnown RBP3.2□□□□□ -1.9
NEB-209ENST00000427231 PUS7Q96PZ0 661 aaKnown RBP3.2□□□□□ -1.9
NEB-209ENST00000427231 SKOR2Q2VWA4 1001 aaPredicted RBP3.2□□□□□ -1.9
NEB-209ENST00000427231 MCM2P49736 904 aa3.19□□□□□ -1.9
NEB-209ENST00000427231 TNIKQ9UKE5 1360 aa3.19□□□□□ -1.9
NEB-209ENST00000427231 FOXD1Q16676 465 aa3.19□□□□□ -1.9
NEB-209ENST00000427231 PPP4R2Q9NY27 417 aa3.19□□□□□ -1.9
NEB-209ENST00000427231 ZBTB12Q9Y330 459 aaPredicted RBP3.19□□□□□ -1.9
NEB-209ENST00000427231 IBSPP21815 317 aaPredicted RBP3.19□□□□□ -1.9
NEB-209ENST00000427231 MPNDQ8N594 471 aa3.19□□□□□ -1.9
NEB-209ENST00000427231 LMOD3Q0VAK6 560 aa3.19□□□□□ -1.9
NEB-209ENST00000427231 MAP7D2Q96T17 732 aa3.19□□□□□ -1.9
NEB-209ENST00000427231 R3HCC1Q9Y3T6 440 aaKnown RBP3.19□□□□□ -1.9
NEB-209ENST00000427231 TMC1Q8TDI8 760 aa3.18□□□□□ -1.9
NEB-209ENST00000427231 GOLGA6L1Q8N7Z2 621 aa3.18□□□□□ -1.9
NEB-209ENST00000427231 SMC4Q9NTJ3 1288 aa3.18□□□□□ -1.9
NEB-209ENST00000427231 CCDC9Q9Y3X0 531 aaKnown RBP3.18□□□□□ -1.9
NEB-209ENST00000427231 A6NNZ2 444 aa3.18□□□□□ -1.9
NEB-209ENST00000427231 TUBB8Q3ZCM7 444 aa3.18□□□□□ -1.9
NEB-209ENST00000427231 SYAP1Q96A49 352 aaPredicted RBP3.18□□□□□ -1.9
NEB-209ENST00000427231 CGNQ9P2M7 1197 aaKnown RBP3.18□□□□□ -1.9
NEB-209ENST00000427231 DCAF8L1A6NGE4 600 aa3.18□□□□□ -1.9
NEB-209ENST00000427231 FANCIQ9NVI1 1328 aa3.18□□□□□ -1.9
NEB-209ENST00000427231 TICAM2Q86XR7 235 aa3.18□□□□□ -1.9
NEB-209ENST00000427231 SPDYE4A6NLX3 237 aa3.18□□□□□ -1.9
NEB-209ENST00000427231 IRX3P78415 501 aaPredicted RBP3.18□□□□□ -1.9
NEB-209ENST00000427231 FAM43AQ8N2R8 423 aa3.18□□□□□ -1.9
NEB-209ENST00000427231 NOL10Q9BSC4 688 aaKnown RBP3.17□□□□□ -1.9
NEB-209ENST00000427231 CAVIN2O95810 425 aa3.17□□□□□ -1.9
NEB-209ENST00000427231 CALRP27797 417 aaKnown RBP3.17□□□□□ -1.9
NEB-209ENST00000427231 MSNP26038 577 aaKnown RBP3.17□□□□□ -1.9
NEB-209ENST00000427231 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.17□□□□□ -1.9
NEB-209ENST00000427231 ZNF830Q96NB3 372 aaPredicted RBP3.17□□□□□ -1.9
NEB-209ENST00000427231 TCERG1O14776 1098 aaKnown RBP3.17□□□□□ -1.9
NEB-209ENST00000427231 PIK3R5Q8WYR1 880 aa3.17□□□□□ -1.9
NEB-209ENST00000427231 MCCP23508 829 aa3.16□□□□□ -1.9
NEB-209ENST00000427231 TUBBP07437 444 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms