RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 STRCQ7RTU9 1775 aa21.05■□□□□ 0.96
SGCE-203ENST00000425444 CEBPAP49715 358 aaPredicted RBP21.05■□□□□ 0.96
SGCE-203ENST00000425444 PLEKHD1A6NEE1 506 aa21.04■□□□□ 0.96
SGCE-203ENST00000425444 MAGI2Q86UL8 1455 aa21.04■□□□□ 0.96
SGCE-203ENST00000425444 RANGAP1P46060 587 aaPredicted RBP21.03■□□□□ 0.96
SGCE-203ENST00000425444 SAMD9Q5K651 1589 aa21.02■□□□□ 0.96
SGCE-203ENST00000425444 NUP153P49790 1475 aaKnown RBP21.02■□□□□ 0.96
SGCE-203ENST00000425444 HECW1Q76N89 1606 aa21■□□□□ 0.95
SGCE-203ENST00000425444 ARHGEF12Q9NZN5 1544 aa20.99■□□□□ 0.95
SGCE-203ENST00000425444 EHMT2Q96KQ7 1210 aa20.99■□□□□ 0.95
SGCE-203ENST00000425444 UHRF1BP1Q6BDS2 1440 aa20.98■□□□□ 0.95
SGCE-203ENST00000425444 SETD1BQ9UPS6 1966 aaKnown RBP20.97■□□□□ 0.95
SGCE-203ENST00000425444 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.97■□□□□ 0.95
SGCE-203ENST00000425444 ATP10AO60312 1499 aa20.95■□□□□ 0.94
SGCE-203ENST00000425444 PTPRTO14522 1441 aa20.95■□□□□ 0.94
SGCE-203ENST00000425444 SCAPERQ9BY12 1400 aa20.95■□□□□ 0.94
SGCE-203ENST00000425444 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
SGCE-203ENST00000425444 C9orf84Q5VXU9 1444 aa20.93■□□□□ 0.94
SGCE-203ENST00000425444 LTBP4Q8N2S1 1624 aa20.89■□□□□ 0.94
SGCE-203ENST00000425444 IQSEC2Q5JU85 1478 aa20.88■□□□□ 0.93
SGCE-203ENST00000425444 PLCH2O75038 1416 aa20.84■□□□□ 0.93
SGCE-203ENST00000425444 UBAP1LF5GYI3 381 aa20.82■□□□□ 0.92
SGCE-203ENST00000425444 MYT1LQ9UL68 1186 aa20.82■□□□□ 0.92
SGCE-203ENST00000425444 EFCAB2Q5VUJ9 269 aa20.81■□□□□ 0.92
SGCE-203ENST00000425444 ESF1Q9H501 851 aaKnown RBP20.8■□□□□ 0.92
SGCE-203ENST00000425444 C3P01024 1663 aa20.78■□□□□ 0.92
SGCE-203ENST00000425444 NCOA1Q15788 1441 aa20.78■□□□□ 0.92
SGCE-203ENST00000425444 AFAP1Q8N556 730 aa20.76■□□□□ 0.91
SGCE-203ENST00000425444 CDK13Q14004 1512 aaKnown RBP20.76■□□□□ 0.91
SGCE-203ENST00000425444 TRAPPC8Q9Y2L5 1435 aa20.76■□□□□ 0.91
SGCE-203ENST00000425444 ZNF518AQ6AHZ1 1483 aa20.75■□□□□ 0.91
SGCE-203ENST00000425444 ARHGAP35Q9NRY4 1499 aa20.74■□□□□ 0.91
SGCE-203ENST00000425444 ZNF335Q9H4Z2 1342 aaPredicted RBP20.73■□□□□ 0.91
SGCE-203ENST00000425444 MYO5CQ9NQX4 1742 aa20.72■□□□□ 0.91
SGCE-203ENST00000425444 FMN1Q68DA7 1419 aa20.71■□□□□ 0.91
SGCE-203ENST00000425444 DIP2CQ9Y2E4 1556 aa20.7■□□□□ 0.9
SGCE-203ENST00000425444 KDM5CP41229 1560 aa20.69■□□□□ 0.9
SGCE-203ENST00000425444 CAMSAP1Q5T5Y3 1602 aa20.69■□□□□ 0.9
SGCE-203ENST00000425444 NCKAP5LQ9HCH0 1330 aa20.69■□□□□ 0.9
SGCE-203ENST00000425444 ATP1B4Q9UN42 357 aaPredicted RBP20.68■□□□□ 0.9
SGCE-203ENST00000425444 REREQ9P2R6 1566 aa20.68■□□□□ 0.9
SGCE-203ENST00000425444 ARHGAP5Q13017 1502 aa20.65■□□□□ 0.9
SGCE-203ENST00000425444 SCAF1Q9H7N4 1312 aaKnown RBP20.65■□□□□ 0.9
SGCE-203ENST00000425444 ABCA6Q8N139 1617 aa20.64■□□□□ 0.9
SGCE-203ENST00000425444 MED1Q15648 1581 aaPredicted RBP20.64■□□□□ 0.9
SGCE-203ENST00000425444 AGLP35573 1532 aa20.63■□□□□ 0.89
SGCE-203ENST00000425444 CNTLNQ9NXG0 1405 aa20.63■□□□□ 0.89
SGCE-203ENST00000425444 HSPA1LP34931 641 aa20.63■□□□□ 0.89
SGCE-203ENST00000425444 CDK11AQ9UQ88 783 aaPredicted RBP20.63■□□□□ 0.89
SGCE-203ENST00000425444 MLH3Q9UHC1 1453 aa20.62■□□□□ 0.89
SGCE-203ENST00000425444 KIF14Q15058 1648 aa20.6■□□□□ 0.89
SGCE-203ENST00000425444 PIP4K2BP78356 416 aa20.6■□□□□ 0.89
SGCE-203ENST00000425444 NPATQ14207 1427 aa20.6■□□□□ 0.89
SGCE-203ENST00000425444 PKD2Q13563 968 aa20.59■□□□□ 0.89
SGCE-203ENST00000425444 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.89
SGCE-203ENST00000425444 CLIP1P30622 1438 aa20.56■□□□□ 0.88
SGCE-203ENST00000425444 ZMYM3Q14202 1370 aa20.55■□□□□ 0.88
SGCE-203ENST00000425444 PPP6R1Q9UPN7 881 aa20.54■□□□□ 0.88
SGCE-203ENST00000425444 TOM1O60784 492 aa20.53■□□□□ 0.88
SGCE-203ENST00000425444 PLA2R1Q13018 1463 aa20.53■□□□□ 0.88
SGCE-203ENST00000425444 TROQ12816 1431 aaPredicted RBP20.53■□□□□ 0.88
SGCE-203ENST00000425444 MROH2AA6NES4 1674 aa20.51■□□□□ 0.87
SGCE-203ENST00000425444 SUPT6HQ7KZ85 1726 aaKnown RBP20.51■□□□□ 0.87
SGCE-203ENST00000425444 CASKIN1Q8WXD9 1431 aa20.51■□□□□ 0.87
SGCE-203ENST00000425444 TCOF1Q13428 1488 aaKnown RBP20.5■□□□□ 0.87
SGCE-203ENST00000425444 CDC42BPBQ9Y5S2 1711 aa20.5■□□□□ 0.87
SGCE-203ENST00000425444 KIDINS220Q9ULH0 1771 aa20.49■□□□□ 0.87
SGCE-203ENST00000425444 ABCC1P33527 1531 aa20.48■□□□□ 0.87
SGCE-203ENST00000425444 CCDC18Q5T9S5 1454 aa20.48■□□□□ 0.87
SGCE-203ENST00000425444 ZNF142P52746 1687 aaPredicted RBP20.48■□□□□ 0.87
SGCE-203ENST00000425444 LRRIQ1Q96JM4 1722 aa20.47■□□□□ 0.87
SGCE-203ENST00000425444 MYO3AQ8NEV4 1616 aa20.47■□□□□ 0.87
SGCE-203ENST00000425444 FYCO1Q9BQS8 1478 aa20.47■□□□□ 0.87
SGCE-203ENST00000425444 CEP170BQ9Y4F5 1589 aaPredicted RBP20.46■□□□□ 0.87
SGCE-203ENST00000425444 ITSN2Q9NZM3 1697 aa20.46■□□□□ 0.87
SGCE-203ENST00000425444 CLTCQ00610 1675 aaKnown RBP20.43■□□□□ 0.86
SGCE-203ENST00000425444 PTPRKQ15262 1439 aa20.43■□□□□ 0.86
SGCE-203ENST00000425444 PREX2Q70Z35 1606 aa20.42■□□□□ 0.86
SGCE-203ENST00000425444 CEP162Q5TB80 1403 aa20.41■□□□□ 0.86
SGCE-203ENST00000425444 CPS1P31327 1500 aa20.41■□□□□ 0.86
SGCE-203ENST00000425444 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.85
SGCE-203ENST00000425444 SHANK2Q9UPX8 1470 aa20.38■□□□□ 0.85
SGCE-203ENST00000425444 SPAG9O60271 1321 aaKnown RBP20.38■□□□□ 0.85
SGCE-203ENST00000425444 GGT6Q6P531 493 aa20.38■□□□□ 0.85
SGCE-203ENST00000425444 SAMD9LQ8IVG5 1584 aa20.38■□□□□ 0.85
SGCE-203ENST00000425444 ZNF777Q9ULD5 760 aaPredicted RBP20.37■□□□□ 0.85
SGCE-203ENST00000425444 A2ML1A8K2U0 1454 aa20.35■□□□□ 0.85
SGCE-203ENST00000425444 DNMT1P26358 1616 aaKnown RBP20.34■□□□□ 0.85
SGCE-203ENST00000425444 POLR1AO95602 1720 aaPredicted RBP20.31■□□□□ 0.84
SGCE-203ENST00000425444 CDC42BPAQ5VT25 1732 aa20.31■□□□□ 0.84
SGCE-203ENST00000425444 LOC105371045A0A1W2PR82 267 aa20.31■□□□□ 0.84
SGCE-203ENST00000425444 HNRNPMP52272 730 aaKnown RBP eCLIP20.31■□□□□ 0.845e-8■■■■■ 27.1
SGCE-203ENST00000425444 A2MP01023 1474 aa20.3■□□□□ 0.84
SGCE-203ENST00000425444 SYCP2Q9BX26 1530 aa20.3■□□□□ 0.84
SGCE-203ENST00000425444 NEURL4Q96JN8 1562 aa20.29■□□□□ 0.84
SGCE-203ENST00000425444 ATP7AQ04656 1500 aa20.29■□□□□ 0.84
SGCE-203ENST00000425444 PLXNC1O60486 1568 aa20.29■□□□□ 0.84
SGCE-203ENST00000425444 ALKQ9UM73 1620 aa20.28■□□□□ 0.84
SGCE-203ENST00000425444 ANKLE2Q86XL3 938 aa20.27■□□□□ 0.84
SGCE-203ENST00000425444 RGS17Q9UGC6 210 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms