RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 YEATS2Q9ULM3 1422 aa26.33■■□□□ 1.81
DDR1-234ENST00000424544 ARID4BQ4LE39 1312 aaPredicted RBP26.33■■□□□ 1.81
DDR1-234ENST00000424544 CLIP1P30622 1438 aa26.31■■□□□ 1.8
DDR1-234ENST00000424544 MYO5CQ9NQX4 1742 aa26.3■■□□□ 1.8
DDR1-234ENST00000424544 CCDC18Q5T9S5 1454 aa26.3■■□□□ 1.8
DDR1-234ENST00000424544 PCF11O94913 1555 aaKnown RBP26.29■■□□□ 1.8
DDR1-234ENST00000424544 ZFYVE16Q7Z3T8 1539 aa26.28■■□□□ 1.8
DDR1-234ENST00000424544 AFAP1Q8N556 730 aa26.25■■□□□ 1.79
DDR1-234ENST00000424544 SIGLEC1Q9BZZ2 1709 aa26.25■■□□□ 1.79
DDR1-234ENST00000424544 FYCO1Q9BQS8 1478 aa26.24■■□□□ 1.79
DDR1-234ENST00000424544 MADDQ8WXG6 1647 aa26.24■■□□□ 1.79
DDR1-234ENST00000424544 ATP10AO60312 1499 aa26.22■■□□□ 1.79
DDR1-234ENST00000424544 ARHGAP5Q13017 1502 aa26.21■■□□□ 1.79
DDR1-234ENST00000424544 CDC42BPBQ9Y5S2 1711 aa26.21■■□□□ 1.79
DDR1-234ENST00000424544 ZNF518AQ6AHZ1 1483 aa26.19■■□□□ 1.78
DDR1-234ENST00000424544 KDM5CP41229 1560 aa26.18■■□□□ 1.78
DDR1-234ENST00000424544 ARHGEF12Q9NZN5 1544 aa26.16■■□□□ 1.78
DDR1-234ENST00000424544 C9orf84Q5VXU9 1444 aa26.14■■□□□ 1.78
DDR1-234ENST00000424544 PREX2Q70Z35 1606 aa26.14■■□□□ 1.77
DDR1-234ENST00000424544 MLH3Q9UHC1 1453 aa26.13■■□□□ 1.77
DDR1-234ENST00000424544 TRAPPC8Q9Y2L5 1435 aa26.12■■□□□ 1.77
DDR1-234ENST00000424544 MLECQ14165 292 aa26.11■■□□□ 1.77
DDR1-234ENST00000424544 RIMS1Q86UR5 1692 aaKnown RBP26.11■■□□□ 1.77
DDR1-234ENST00000424544 GPATCH8Q9UKJ3 1502 aaKnown RBP26.1■■□□□ 1.77
DDR1-234ENST00000424544 LMTK3Q96Q04 1460 aa26.09■■□□□ 1.77
DDR1-234ENST00000424544 ABCC1P33527 1531 aa26.09■■□□□ 1.77
DDR1-234ENST00000424544 CDC42BPAQ5VT25 1732 aa26.08■■□□□ 1.77
DDR1-234ENST00000424544 ILDR1Q86SU0 546 aaPredicted RBP26.08■■□□□ 1.77
DDR1-234ENST00000424544 REREQ9P2R6 1566 aa26.04■■□□□ 1.76
DDR1-234ENST00000424544 DIP2CQ9Y2E4 1556 aa26.03■■□□□ 1.76
DDR1-234ENST00000424544 CEP162Q5TB80 1403 aa26.02■■□□□ 1.76
DDR1-234ENST00000424544 ITSN2Q9NZM3 1697 aa26■■□□□ 1.75
DDR1-234ENST00000424544 KIAA1107Q9UPP5 1409 aa26■■□□□ 1.75
DDR1-234ENST00000424544 ZNF777Q9ULD5 760 aaPredicted RBP25.99■■□□□ 1.75
DDR1-234ENST00000424544 FER1L4A9Z1Z3 1794 aa25.99■■□□□ 1.75
DDR1-234ENST00000424544 HNRNPMP52272 730 aaKnown RBP eCLIP25.98■■□□□ 1.75
DDR1-234ENST00000424544 CFDP1Q9UEE9 299 aaPredicted RBP25.98■■□□□ 1.75
DDR1-234ENST00000424544 MYT1LQ9UL68 1186 aa25.98■■□□□ 1.75
DDR1-234ENST00000424544 ABCA6Q8N139 1617 aa25.98■■□□□ 1.75
DDR1-234ENST00000424544 SAMD9LQ8IVG5 1584 aa25.98■■□□□ 1.75
DDR1-234ENST00000424544 AGLP35573 1532 aa25.98■■□□□ 1.75
DDR1-234ENST00000424544 MTUS2Q5JR59 1369 aa25.97■■□□□ 1.75
DDR1-234ENST00000424544 KIDINS220Q9ULH0 1771 aa25.97■■□□□ 1.75
DDR1-234ENST00000424544 CEBPAP49715 358 aaPredicted RBP25.95■■□□□ 1.74
DDR1-234ENST00000424544 PLPPR3Q6T4P5 718 aa25.95■■□□□ 1.74
DDR1-234ENST00000424544 CCNB3Q8WWL7 1395 aa25.95■■□□□ 1.74
DDR1-234ENST00000424544 HSPA2P54652 639 aa25.94■■□□□ 1.74
DDR1-234ENST00000424544 LOC105371045A0A1W2PR82 267 aa25.93■■□□□ 1.74
DDR1-234ENST00000424544 PLEKHH2Q8IVE3 1493 aa25.91■■□□□ 1.74
DDR1-234ENST00000424544 SYCP2Q9BX26 1530 aa25.9■■□□□ 1.74
DDR1-234ENST00000424544 SPAG9O60271 1321 aaKnown RBP25.89■■□□□ 1.74
DDR1-234ENST00000424544 ZNF644Q9H582 1327 aaPredicted RBP25.88■■□□□ 1.73
DDR1-234ENST00000424544 SETD1BQ9UPS6 1966 aaKnown RBP25.87■■□□□ 1.73
DDR1-234ENST00000424544 EHBP1L1Q8N3D4 1523 aa25.86■■□□□ 1.73
DDR1-234ENST00000424544 MBD5Q9P267 1494 aa25.85■■□□□ 1.73
DDR1-234ENST00000424544 TIAM1Q13009 1591 aa25.84■■□□□ 1.73
DDR1-234ENST00000424544 ATP7AQ04656 1500 aa25.8■■□□□ 1.72
DDR1-234ENST00000424544 INO80Q9ULG1 1556 aaPredicted RBP25.78■■□□□ 1.72
DDR1-234ENST00000424544 CNTLNQ9NXG0 1405 aa25.78■■□□□ 1.72
DDR1-234ENST00000424544 PREX1Q8TCU6 1659 aa25.77■■□□□ 1.72
DDR1-234ENST00000424544 FBXO41Q8TF61 875 aa25.77■■□□□ 1.72
DDR1-234ENST00000424544 NCOA2Q15596 1464 aa25.77■■□□□ 1.72
DDR1-234ENST00000424544 ESF1Q9H501 851 aaKnown RBP25.76■■□□□ 1.71
DDR1-234ENST00000424544 VPS8Q8N3P4 1428 aa25.76■■□□□ 1.71
DDR1-234ENST00000424544 PLXNC1O60486 1568 aa25.76■■□□□ 1.71
DDR1-234ENST00000424544 C3P01024 1663 aa25.76■■□□□ 1.71
DDR1-234ENST00000424544 A2MP01023 1474 aa25.75■■□□□ 1.71
DDR1-234ENST00000424544 RTEL1-TNFRSF6BF6WH68 1400 aa25.75■■□□□ 1.71
DDR1-234ENST00000424544 ZMYM3Q14202 1370 aa25.73■■□□□ 1.71
DDR1-234ENST00000424544 RSPH4AQ5TD94 716 aa25.73■■□□□ 1.71
DDR1-234ENST00000424544 UHRF1BP1Q6BDS2 1440 aa25.72■■□□□ 1.71
DDR1-234ENST00000424544 PPP6R1Q9UPN7 881 aa25.72■■□□□ 1.71
DDR1-234ENST00000424544 SUPT6HQ7KZ85 1726 aaKnown RBP25.69■■□□□ 1.7
DDR1-234ENST00000424544 LRRC9Q6ZRR7 1453 aa25.69■■□□□ 1.7
DDR1-234ENST00000424544 MAP3K1Q13233 1512 aa25.68■■□□□ 1.7
DDR1-234ENST00000424544 NPATQ14207 1427 aa25.67■■□□□ 1.7
DDR1-234ENST00000424544 KANK4Q5T7N3 995 aaPredicted RBP25.67■■□□□ 1.7
DDR1-234ENST00000424544 DHX29Q7Z478 1369 aaKnown RBP25.67■■□□□ 1.7
DDR1-234ENST00000424544 STRCQ7RTU9 1775 aa25.67■■□□□ 1.7
DDR1-234ENST00000424544 MROH2AA6NES4 1674 aa25.65■■□□□ 1.7
DDR1-234ENST00000424544 GGT6Q6P531 493 aa25.65■■□□□ 1.7
DDR1-234ENST00000424544 ADGBQ8N7X0 1667 aa25.64■■□□□ 1.7
DDR1-234ENST00000424544 DMRT2Q9Y5R5 561 aa25.64■■□□□ 1.7
DDR1-234ENST00000424544 CAMSAP2Q08AD1 1489 aa25.63■■□□□ 1.69
DDR1-234ENST00000424544 CCDC141Q6ZP82 1450 aa25.63■■□□□ 1.69
DDR1-234ENST00000424544 CERKQ8TCT0 537 aa25.6■■□□□ 1.69
DDR1-234ENST00000424544 PTPRKQ15262 1439 aa25.59■■□□□ 1.69
DDR1-234ENST00000424544 ARHGEF5Q12774 1597 aa25.58■■□□□ 1.69
DDR1-234ENST00000424544 PTPRTO14522 1441 aa25.56■■□□□ 1.68
DDR1-234ENST00000424544 CLTCQ00610 1675 aaKnown RBP25.56■■□□□ 1.68
DDR1-234ENST00000424544 TSPY4P0CV99 314 aa25.55■■□□□ 1.68
DDR1-234ENST00000424544 TSPY10P0CW01 314 aa25.55■■□□□ 1.68
DDR1-234ENST00000424544 KIF3BO15066 747 aa25.54■■□□□ 1.68
DDR1-234ENST00000424544 NCOA1Q15788 1441 aa25.53■■□□□ 1.68
DDR1-234ENST00000424544 MIA2Q96PC5 1412 aa25.53■■□□□ 1.68
DDR1-234ENST00000424544 MYOM3Q5VTT5 1437 aa25.5■■□□□ 1.67
DDR1-234ENST00000424544 CAMSAP1Q5T5Y3 1602 aa25.45■■□□□ 1.67
DDR1-234ENST00000424544 MAST1Q9Y2H9 1570 aa25.45■■□□□ 1.66
DDR1-234ENST00000424544 FAM135AQ9P2D6 1515 aa25.45■■□□□ 1.66
DDR1-234ENST00000424544 FBXO31Q5XUX0 539 aaPredicted RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms